Xiphias gladius (swordfish): 120801749
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Entry
120801749 CDS
T07311
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
xgl
Xiphias gladius (swordfish)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
120801749
NCBI-ProteinID:
XP_040004902
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Position
LG16:19326845..19329301
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AA seq
743 aa
AA seq
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MPPLPAPLFLTLLQLALLNYVSGGAFYGHKQHPQPYQPVQHLQHMGMGKESFPQQQYLGK
EVPYMQYPHYRKELPQMPVHKGKENARKGGGYNGGQDKGHTIPSGAEGIPQGEPGPAGPP
GPEGPPGPPGPPGNGQPGPVGQPGPPGPPGVPGVGKPGLPGLPGKPGGNGEAGPQGEMGP
RGEEGPSGQQGPQGPPGPPGLPGMGKPGGQGLPGQPGSKGEPGHKGLPGLPGLPGPKGDK
GMGQPGQPGHKGLPGPPGPAGPRGLPGFGKPGLNGAPGPQGPPGEKGRPGEQGPAGPAGE
GGQPGPPGLPGQGKPGQNGLPGQPGMPGAKGHPGPPGLPGKPGLPGFGKPGLPGTKGDKG
MGGPPGPSGPKGDKGHGGLPGMLGPPGPNGPPGPPGPMGPSGGLGAPGPKGDCGEGGPKG
LDGAQGDPGPPGIPGKDGLPGDRGEPGPRGPPGPGGSKGDSGHKGLPGAPGNPGLPGPKG
QDGLHGEMGPQGPKGIPGMDGATGPIGPPGPSGQKGDSGSPGLPGITGEGSPGLPGPIGP
TGKEGPSGPPGKPGQPGPPGPPGPPGVPGLSPDMAGVLSEMGPGLDGVKAGSYGKKSKYG
GNGAEVMGASGLEMPAFTAVATTPFPPVGTPVVFDKLLYNGRQNYNPQTGIFTCDMPGIY
YFAYHIHCKGANVWVALMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQPGDNVYIQLPSD
QASGLYAGQYVHSSFSGYLLYPM
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctccctgcccccctcttcttgacactgctgcagcttgcattacttaattat
gtgagtggtggggcattctacggacacaagcaacaccctcagccataccagccagtgcag
cacctccaacacatgggcatgggcaaagaaagctttccccagcagcagtaccttggcaaa
gaagtgccctatatgcagtatccccattacaggaaggagctaccccagatgccagtgcac
aagggcaaagaaaatgctcgtaaagggggcggatataatggtggtcaagacaaaggtcac
acaatccccagtggtgctgagggaattcctcaaggagaaccaggaccagctgggccacca
ggaccagagggacctccgggacctcctgggcctccagggaacggacaaccaggacctgtg
ggacaacctggacctcctggtccaccaggagtgcctggagtgggcaaaccaggtttgcca
ggactgccaggcaagccaggaggaaatggtgaggctgggccacaaggagaaatggggcca
agaggggaggaagggccatctggacagcaagggcctcagggtcccccaggaccacctggg
ctaccaggaatgggtaaaccaggggggcagggattaccaggccaaccagggtcaaaagga
gagccaggtcacaaaggtctgccaggactaccaggattaccaggacccaaaggagataaa
gggatgggccagccaggacaacctggtcacaaagggctcccagggcccccgggaccagct
ggcccaagaggactgcctggttttggaaaaccggggttgaatggggcgccaggcccacaa
ggaccaccaggagagaaaggacgtcctggagagcaaggaccagctgggcctgcaggtgaa
ggaggacagcctggcccaccagggctacctggtcaaggaaagccaggtcaaaacggcctg
ccaggacaaccaggcatgccaggtgcaaaaggtcatccaggaccaccaggtttgccagga
aaaccaggactgcctggatttggtaaaccaggactcccaggaaccaagggtgataaaggt
atgggtgggccacccggaccttcaggaccaaaaggagataagggccatggaggactacct
ggcatgcttggaccccctggaccaaatggtccaccaggtcctccaggccctatgggaccc
tcaggaggtttaggtgcacctggtcctaaaggagactgtggggaaggaggacctaagggg
cttgatggagcccagggtgaccctggtcctcctggaatacctggtaaggatggtctgcct
ggagaccggggagagccagggccaagaggtcccccaggaccaggtggttccaaaggagac
agtggacataaaggtctacctggtgcccctggtaatcctggactaccaggaccaaaagga
caagatggattacatggtgaaatgggacctcaaggtcctaaaggaatcccaggaatggat
ggtgcaacaggaccaatcgggcctcctggtccctcagggcaaaaaggagatagtggttca
cctggtctaccaggcattacaggtgaggggagtccaggtcttcctggtcccataggaccc
acaggaaaagagggcccatcaggaccccctgggaaaccaggtcagccgggcccccctgga
ccaccaggaccacctggagtacctggtctgtctcctgacatggctggagtactctctgaa
atgggtcctggactagatggtgttaaggctggtagttatggtaagaagagcaagtacgga
ggcaatggggcagaagtaatgggtgccagtgggctggaaatgccagcattcacagctgta
gcaacaactccttttccacctgtgggcactccagttgtctttgacaagctcttgtacaat
ggtcgtcaaaactacaacccccagacaggaattttcacctgtgacatgcctggcatttat
tactttgcctaccacatccattgcaaaggagccaatgtgtgggtggctttgatgaggaac
aatgaaccagtgatgtatacatatgatgaatacaaaaagggtttcctagaccaagcatca
gggagtgcagtattacctctacaacctggagacaatgtgtatattcagctgccctcagat
caggcctcaggactttatgctgggcagtatgtgcactcctccttttctgggtacttgttg
tatccgatgtaa
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