Xiphias gladius (swordfish): 120801816
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Entry
120801816 CDS
T07311
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120801816
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120801816
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
120801816
NCBI-ProteinID:
XP_040005013
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All DBs
Position
LG16:22931854..22937771
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AA seq
931 aa
AA seq
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MGLKDHLEDGTGHILSLELDLDYLHVEGAERQGGLSTATGAGNVGVLQVRAGAPSNSSNS
IGSSSTSFSTHSSYSSSSSCSNFSEESAVSDSEDERLQNGSGSESQNPHRHQPHLRHQES
PSVCQQVRLDLTPNRSQGCPTQPETTPPTDPVTDCRTKVEFALKLGYSEELVLLVLRKLG
KDALINDVLGELVKLGTKTEMEQQGGPTVSDSPSVSLSSSLACSSSSSNSSLDSCRLLCP
SQLLEDKENLRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHRDITVFVPAWRKE
QSRPDAVITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDN
YRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHRKQP
CPYGKKCTYGHKCKFYHPERGSQPQRAVADELRASAKISSVVSRGLLEDALMRKSQSSGQ
GMADAEPSRGTPKKQPNPIPQSSFTDLLEDRFRVQSKVEGCRGSNSSSSSSFSSSFLGHP
APGGPPSSGSLDRWEHPGGRGGSSSRIAGVSGPSQADTCHRYESPELDYSSMLKTYSSLS
LVVPQSPECFFPADLRAGSLLSDCSSEGSVSSDSFSPDSLLDDGPKCHHHHHPHHHHHCS
GQYTHPASRVPPGLGQLAPHGYPVPQALQRQHGFGLENLSSSVTSHASPHPYKTPSAYVP
PHLQHPLLSSFPGEFPTRPQCQPQTSTAHSHSQSSVLGRKPMGSLWQEGGLQDSRVYEGS
PLHSRRNYPGLNPQPQHLISWDTHYQQSPKPCYDLFTFQSHPEVHEKDWHSLWGRQAHSS
PRGLSNLSLPPPAQLSLPSNSSQKTQLPSVPQHQEPPALGRYQDLRERMFINLCGIFPTD
LVRMVMTRNPHVMDAQELAAAILMEKSQLGS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgggacaggccacatcctcagcctggagctggat
ctggactacctccatgtggaaggtgctgagcggcagggcggcctgagcaccgcaacaggt
gctgggaatgtaggagtcttgcaggtccgagctggtgccccgagtaacagcagtaacagt
attggtagcagtagcaccagttttagcactcattcaagctatagcagcagcagtagttgc
agtaacttctctgaggagagtgccgtgtctgacagcgaagatgaacgactccagaatggg
tctggttctgaatcacaaaatcctcatcgacatcagcctcacctgcgccaccaagagtcc
ccctcagtctgtcagcaggtcaggctggacctgacaccaaaccgatcccagggatgcccc
acacagccagaaacaacacctcctactgaccctgtcacagactgccgcaccaaagtggag
tttgctctcaagctaggctactctgaggagctggtgctgctggtgctgaggaagctgggc
aaagacgcactcattaacgatgtcctgggagagctggtgaaactgggaaccaagacagag
atggagcagcaaggaggtcccactgtctctgactctccctccgtctctttgtcatcctct
ttggcctgctcctcctcgtcctccaactcctctctggactcctgtcggctgctttgtccg
tctcagctgctggaggacaaggaaaaccttcggcctgtcgtggtggatgggagcaacgta
gccatgagtcatggaaataaggaggtgttctcctgtcaaggcatccagctggctgtagat
tggttcttggagcgaggtcaccgtgatatcactgtctttgttcctgcctggaggaaggag
cagtcgcgccctgatgctgtcatcacagaccaagagattctacggcgactcgagaaagag
aagatcctggtcttcactccatctcgccgtgtgcaggggcgccgtgtggtttgctatgac
gaccgcttcatcgtcaagctggcctatgagtcggacggcatcattgtttccaacgacaac
taccgtgacctagccaatgagaagccggagtggaagaaattcattgatgagcgtctgctg
atgtactcctttgtgaatgacaagttcatgccaccagatgaccccctgggacgccatgga
cccagtcttgagaactttctgaggaagaggcctgttattcctgaacacagaaagcagcca
tgcccttatgggaagaagtgcacatatggccacaagtgcaagttttaccaccctgaaagg
ggaagccagccccagcgtgccgtggctgatgagctccgtgccagtgccaaaatttcatca
gtagtttccagaggtctgctggaagatgccctgatgaggaagagccaaagttctggtcaa
ggaatggctgatgccgagccaagtcggggcactccaaagaaacagccaaaccccatccct
caaagctccttcactgacctcctggaggacaggtttcgggtccagtccaaagtggaaggc
tgtaggggaagcaacagtagcagcagcagtagctttagcagcagctttctagggcatcct
gctccaggggggcccccttcatcgggaagtctggatcgatgggaacaccctgggggtaga
ggtggaagcagttccaggattgctggagtttcaggaccaagccaggctgacacttgccac
agatacgagtctccagagctggactacagctcaatgttaaagacctactcaagcctcagt
ctggtagtgccacagagtcctgaatgcttcttcccagctgatctgcgagctggatccctg
ctgtcagactgtagcagtgaaggcagtgtcagctcagactctttctcccctgactccttg
ttagatgatggccccaagtgccaccaccaccaccatcctcatcaccatcatcactgctct
ggccagtacacccatcctgctagccgtgtcccacctggactgggccagctggctccacat
ggctatccagttcctcaagcactgcagagacagcatggttttggcttggaaaacctttca
tcttctgttacctctcatgcttctccacatccttataaaaccccttcagcctatgtccca
ccccaccttcagcatccattactgagcagtttcccaggggaattcccaactcgtccacaa
tgccaacctcaaacatccactgctcactcccactctcagagctccgtccttggccgcaaa
ccgatgggctccctttggcaggaaggcgggctccaggactcccgagtgtatgaagggtca
ccacttcattccagaagaaactaccctgggctaaacccacaaccacagcatctgataagc
tgggacacccattaccagcagtcccctaagccttgctatgatctgtttaccttccagagc
catccggaagtccatgaaaaggattggcactctctttggggcaggcaagcccattcatca
ccacgtggcctttcaaatttaagtcttccaccacctgcgcagctttcccttccatccaac
tcttcccaaaaaacccaactgccctcagtgccccagcatcaggagccccctgccttgggt
cgataccaggaccttagagagaggatgttcattaacttgtgtggcatcttccctacagat
ttggtgagaatggtgatgaccagaaaccctcatgttatggatgctcaggagcttgcagct
gcaattttgatggagaaatcgcagctcgggtcttga
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