Xiphias gladius (swordfish): 120801818
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Entry
120801818 CDS
T07311
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120801818 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Protocadherins
120801818 (si:ch211-199f5.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RibLong
FctA
DUF4577
DNER_C
DUF5783
Motif
Other DBs
NCBI-GeneID:
120801818
NCBI-ProteinID:
XP_040005016
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All DBs
Position
LG16:16160386..16163756
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AA seq
980 aa
AA seq
DB search
MTRGKFTTYWYRWIFISSIHQFLFASLARSEGNTVRYQTSEEEAPGTVIGNLAKDMSLSV
SHSSKTSFRMMKQFNDSFIRVRESDGELAVGERIDRERICRHTPQCLITFDVVNFSKDRY
KLIHVEVEVRDVNDNSPEFPNKESTAEISENAAVGSRIPLDPAVDADVGSNYIQSYQISV
NSHFTIDVLLRADGVKYAELVLMRELDRETQSSYAVELVATDGGNPCRSGSTKITIKVTD
FNDNSPVFDQNSFSVSLPEDAPVGTVILDLNAVDADEGLNGEVVYGFGKQVSHEIRELFQ
VDSKSGRLTLRSPVDFEDKRTYELDVQATDQGPNPTPSVCKIIIHVTDVNDNAPEISITP
MTSITTGVAYISEAADKDSLVALISTLDRDSGVNSQVHCTLYGHDHFKLRQAYEDSYMIV
TAAALDRERIREYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTKAVYEVSVVENN
APGAYITTVEASDADLGNNGKITYRLGDSVIMGSPVNTFVSLNSVSGSIYALRSFNYEVM
KQLDIHIQASDGGSPQLQSTAVIRLKIVDQNDNQPSIIEPVLYKGSAEVFLPKDAPAGYV
VTQIKATDADEGINAQLSYKITEGENLGFSINKETGKVRVSRQLTYDLTDNVKVTVSVSD
NGSPALTSTAIIHLTFIEGTLPSLPSFAQNGSEELFEWDMSIAIIIVLAGSCSLLLLAII
LITTICSRRKKETRGRGCDEKEDIPNVEKVESGHIDSVIASHKGKVFDAHPFPEKPPMAS
SNTTETGCEDGRQTAGIFESNSRVMEGQLKGYSTLPGYGKETVRPITIWKGNSFTTISAR
DPHISGKDSGKGDSDFNDSDSDISGDVHKKDSPPMNSLWACTSECKVLGHSDRCWSPSAT
RPNTSLACGPHLSTFSKTASLPRDTRRENYYPAHITKTNGLQSVYEKVQHQEFDYILVGP
PTPARIQETDEISIPEYTNS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgacacggggcaaattcaccacctactggtaccggtggatttttatatcctcaatccat
cagtttttattcgcctcactggcccgatccgaaggaaatactgtgcggtaccagaccagt
gaggaggaagcgccaggtacggtcatcgggaacctcgccaaggacatgtccttgagtgtg
tctcattcctccaagaccagttttaggatgatgaaacaattcaacgattcgttcatcagg
gtgcgagagagcgacggggaactcgccgtcggggagcggattgacagggaaagaatctgc
agacacactccccagtgtctcattacttttgacgtggtgaatttctccaaagatcgctac
aaactgattcacgttgaggtggaagtaagggacgtcaacgacaactccccggagtttccg
aacaaggaatctaccgcggagatctcagagaacgccgcggtcgggtcccggatccctcta
gacccagccgtggacgctgatgtcgggtcaaactacatccagagctatcagatttccgtc
aacagtcactttaccattgatgtgctcttgagagcggatggggttaaatatgcggaattg
gtgctaatgagagagctagacagggagactcagtcatcatacgctgttgagctggtcgcc
acagacggcgggaacccatgcaggtcggggtccacgaagataactataaaagtcacggac
tttaacgacaacagccccgtttttgaccagaacagcttctcggtcagtttgccggaggac
gcaccggttggcaccgttatactggacttgaacgcagttgatgcagatgagggtttaaac
ggagaggtcgtctacgggttcgggaaacaggtttctcacgagatccgagaacttttccaa
gtggacagtaaatcgggtcgcctgacgctcaggagcccggtggattttgaggacaaacgc
acctatgagctagacgtgcaggcgactgatcagggacccaacccgaccccctccgtgtgc
aaaatcataattcatgtcacagacgttaatgacaatgcccccgaaatcagcatcaccccg
atgacctccatcacgacaggcgttgcgtacattagcgaggcggcagacaaggacagtctg
gtggctctgatcagcaccttggacagggactcgggtgtaaacagccaggtccactgcacg
ttatacggccacgaccatttcaaactccggcaggcttacgaggacagctacatgatagtc
acagcagcagccctggacagggagaggattagggagtataacttgacggtcatggctgag
gattttgggtcacctccgctgagaaagatcactcagtacaccatcaggctcagcgacgag
aatgacaacgcccctcacttcaccaaggctgtctacgaagtttcggtggtggaaaacaac
gccccgggcgcttacatcaccacagttgaggccagcgacgcggatctgggcaacaatggc
aaaattacttacagacttggggacagtgttatcatgggctccccagtaaacaccttcgtg
tcgcttaactcagtgtcaggctccatatatgcactaagaagtttcaattatgaagtaatg
aaacagctggacatacacatccaagcgagtgatggggggtcaccacagttgcagagcaca
gctgtcatcagactaaaaatagtcgatcagaatgacaaccagccttctatcatagagcca
gtcctttacaaaggatctgccgaggttttcctgcccaaagatgcacctgcaggttatgtg
gtaacccagataaaagccacagacgctgatgaaggcataaatgcacagctgtcctataag
atcaccgagggggaaaacctgggcttctctatcaacaaagaaacagggaaggtgcgcgtg
agcagacagctgacatatgatctcacggacaatgtcaaagtcacggtgtcagtcagtgac
aatggatcccctgcacttacctctacagccattatacacttaacttttatagaaggaact
ctacccagcttgccttcttttgctcaaaatggcagcgaggagctctttgaatgggacatg
tccatagccataatcattgtactggcagggagctgctctctcctcctgctggctatcatt
ctcatcacaaccatttgcagccggcggaaaaaagagacaagggggagggggtgtgatgaa
aaagaagacataccaaatgtggagaaagtggaaagtggtcatattgattcagtgattgcc
agccataaaggcaaagtgtttgatgcccatccatttccagagaaacctccaatggccagc
agcaacacaacagagaccggctgtgaggatggcaggcagacagcaggcatctttgaatcc
aacagcagggtgatggagggtcaattgaagggttattctacactgccaggatatgggaaa
gaaactgtcagaccaataacgatatggaagggtaattcattcacaacaatctcagcaaga
gatccccacatcagtggcaaggacagtggaaaaggggacagtgacttcaatgacagtgat
tctgacataagtggagatgtgcacaaaaaagattcgccaccaatgaacagtctctgggca
tgtacaagtgagtgcaaggtgttgggacactccgaccgatgctggagcccttcagctaca
aggcccaacacgagtctggcctgtggaccgcatctgtcaacgttctccaagacagcttca
cttccccgggacaccagaagggaaaattactacccagctcacataaccaaaaccaacggg
ctgcaaagtgtgtacgaaaaagtccaacaccaggaatttgattacatcctcgttggtcca
ccgacaccggccagaatacaggaaacagatgagatatcaattccagagtacacaaattct
taa
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