Xiphias gladius (swordfish): 120801857
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Entry
120801857 CDS
T07311
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120801857 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120801857 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120801857 (si:ch211-269e2.1)
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
tRNA_bind_3
NFACT_N
Motif
Other DBs
NCBI-GeneID:
120801857
NCBI-ProteinID:
XP_040005080
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Position
LG16:complement(20849123..20868762)
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AA seq
1183 aa
AA seq
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MIPEPTAAAASRPSEQNQNSRDGANSSGAVNHSEDESGNENRQKSVRRRKRAHEGSENVK
RKRAKAGRSSVRRARGSHNKQRHVEAVTLFEVVTMGRSAMQAVIEDWIEAYVTDRDSSLL
DLISFFIQCSGCKGVVTAEMCQSKEDSDVMSKMVEELDEVASLQYKKFLAFPWILTVTWP
MDTDSVEYPLIQSGPYGRWFHSEFCDFVSVLVAQCQHSVIFDRYLMDTLISLLTELSNSY
VRAFRHTCTLAAVKLLSALVGVALSLSVGIENSQKLYKVQRTKTARQKSTPQLERIQKKI
TELQEKRVEIESMMDIIFKGVFLKRYRDVLPEIRSICMEELGLWMKLYSSAFLSDSYLKY
VGWMMYDKIPDVRLKCVLGLQGLYGDPLLLPKLDLFTSRFKDRMISMTLDKDSEVAVQTM
KLLVLISKTSDDALSPEDYKQLLQFVYSSQRPLAATAGELLFSRLLNTVTPASDTQDERN
EEEAHERRTSARLKALLQFHQESELHKHVVYLVDSLWDCGGALLKDWATLTSILLQDPSS
HSTGLTLAEQAVLVEILVASVRQASEGPALAGRSGAKKVMSAREKKIQMDDCTKLTEHLL
LVLPKLLSKFSSSRDIVASLMRIPQYFHPEGPEAENTQAVSSLMAEMGAVLDLHSGPAVL
EAAARTYLALCGEETTWCATARAARDSLVQTWADRLTVLLEDSLKGDCFSADEEKTGEFL
ATLKKLRAFHNCHDLSRWSLFELLSPLLPAESSRGGAPPEVLLEVLQCLCYFLLWSLNTS
HETLTSRENAVAQRLQLRLFCERSHRCLSHPDNVVRQQAFLGVCDVLTAHSYQLHVWDPT
SFGPLLYTPSPKLQRALLTFVCMHVFVGPECDSQSRVSENSEVERLEDLHKRRNLLAAFC
KLIVHGVLEMSMAAEVFMFYMKYYNDFGDIIKETMYRTRQIDKIESARTLALCLQQLFVR
LKKEQESGGRAHPGVQTFTSIKELARRFALTFGDLVKFRECVVMIHRNGIEFVFQEFSQT
PETPTPPYLSFLTILSEFSCKLLKPDKKTVFSCLQKHTAEHIIDLREECWQPLIYYRASL
LAAAEGEDAVSYVSSDRKPNPPNRSPFSKQKLEEGKSPCPVSPVDSKISKGHRSNFSPSH
QERTTDMDPFSLPLEPSARRLDTEGTIVSTSNEVDDDTVEIEL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgataccagagcccacggccgcagctgcgtccaggccctcagagcagaatcagaactct
cgcgacggggccaactcctctggagccgtcaatcattcagaggatgagtcggggaatgag
aatagacaaaagagcgtgaggagaaggaaaagagcacacgagggctcagagaatgtcaaa
cgcaaacgtgccaaggccggccgcagcagcgttcgcagagcaagaggcagccacaataaa
cagaggcacgtggaggccgtcaccctgtttgaggtggtcaccatgggcaggagtgccatg
caggcggtgatagaggactggattgaggcgtacgtgacggacagagactcctctctcctt
gatctcatcagcttcttcatccagtgctccgggtgcaaaggcgtggtgacagcagagatg
tgtcagagcaaagaggacagtgatgtgatgagtaagatggtcgaggagctagatgaggtc
gccagtctgcagtataaaaagtttctggcttttccatggatcctcacagtcacgtggccc
atggacacagacagtgtggagtatcctctcatacagtccggcccctacggtcgctggttt
cactccgagttctgtgactttgtgtcggtgctggtggctcagtgtcagcacagcgtcatc
tttgacagatacctgatggacacactgatctcgctgctcacagagctgtcgaactcttac
gtgcgagccttccgacacacctgcacgctagcagcggtgaagctgctgagcgctctggtg
ggcgtggctctgagcctgagtgtcgggatcgaaaacagtcagaaactttacaaggtgcag
aggacaaagacagcgagacagaaaagcacaccacagctggagagaatacagaagaagatt
actgagctgcaggagaagagggtggagatagagagcatgatggacatcatcttcaaagga
gtttttctcaaaagataccgggatgtgcttccagaaatccgctccatctgtatggaggag
ttgggtttgtggatgaagctctacagttctgcatttctcagtgatagctacctcaaatac
gtgggctggatgatgtacgacaaaataccagatgtgcgtctcaagtgtgtgttaggtttg
cagggtttatatggagaccctctgcttctccccaaactagacctgttcaccagccgtttc
aaggaccggatgatctccatgaccctggataaggacagtgaagtggcagtgcagaccatg
aaactactggtgctcatctccaaaacttccgatgatgcgctcagtccagaggactacaag
cagctcctccagttcgtttactcttcacagcgacctcttgcagccaccgcaggggagctg
ctcttctcgaggcttctgaacactgtaactcctgcatctgatactcaggatgaacgaaat
gaggaggaggcacatgaacgacgaacctctgccagactgaaggctctgctgcagttccac
caggagtctgagctgcacaaacatgtggtatacctggtggacagtctgtgggactgcggc
ggagctctgctgaaggactgggccactctcacatccatactgctgcaggacccttcctca
cacagtacaggtcttacactggcagaacaagcagtgcttgtagagattctggtggcgtcg
gtgcgtcaggcctcagagggaccagccctggccgggaggagcggagcgaagaaggtaatg
agcgccagagaaaagaaaattcagatggacgactgtacgaagctgaccgaacatctcctc
ctcgtgcttccaaagttactgtccaagttttcaagtagccgggacatcgttgcctccctg
atgaggattcctcagtacttccaccctgagggtcctgaggctgaaaacacacaggcagta
tccagcctgatggcagagatgggagcggttttggacctccactcgggccctgctgttctg
gaggcggcggcccgcacatatctcgccctgtgcggcgaggagacgacctggtgcgccacg
gcccgggcggccagagactctctggtccagacctgggcggaccgcctgacagtcctgctg
gaggactcactcaagggtgactgcttctccgctgatgaggagaaaaccggagaattttta
gccacactgaagaaactccgagctttccacaactgtcacgacctctctcggtggagcctg
tttgagctgctctctcctctcctgccggcggagagcagccggggaggagcgccgcccgag
gtgctgctggaggttctgcagtgtctgtgttacttcctgctctggtctctcaacacgagt
catgagactctaacctccagagagaatgctgtggcccagaggctgcagctgcgtctgttc
tgtgagaggagtcatcgctgtctctcccaccctgacaacgttgtgcggcaacaggctttt
ctgggtgtgtgcgacgtcctgacggctcattcctaccagctgcacgtgtgggatcccacc
tcctttggtccgctgctctacacacccagtcccaaactgcagagggcgctgttgaccttt
gtatgcatgcacgtctttgttggcccggagtgtgacagccagagcagggtcagcgaaaac
tctgaagtggagaggctggaggaccttcacaaacgcagaaacctgctcgcggccttctgc
aaactgatagtacatggagtgctggagatgagcatggcagctgaggtcttcatgttctac
atgaagtattataacgactttggagacatcatcaaagaaacgatgtacaggacccgacag
atagataagatagagagcgctcgcacactggcgctctgtttgcagcagctgtttgttcgt
cttaaaaaggagcaggagagcggtggtagggctcacccaggggtccagaccttcaccagc
atcaaggagctggccaggcggtttgctcttaccttcggggacctcgtcaagtttcgtgag
tgcgtcgtcatgatccacaggaacggcatagagtttgtgttccaagagtttagccagacc
ccagaaacacctacaccgccatacctctccttcctgaccatcctcagtgagttctcctgc
aaactgctcaaaccagacaagaagacagtgttctcctgcctgcagaagcacaccgcagag
cacattattgacctcagagaggagtgctggcagccgcttatctactatcgtgcttctcta
ttggctgcagctgaaggggaggatgccgtgtcctatgttagctctgacaggaagccaaac
ccgcccaatcgctctcccttctccaaacaaaaactagaagaaggcaagtccccctgtccg
gtaagccccgttgattccaaaattagtaaaggtcacagatccaacttcagtccaagccat
caggagaggacaacagatatggatccgttttctctcccactggaaccttctgcaagaaga
ctggacaccgaaggaaccatcgtcagcacgagcaacgaggtggatgacgacacggtggag
attgaactttaa
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