Xiphias gladius (swordfish): 120801947
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Entry
120801947 CDS
T07311
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120801947 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120801947 (usp9)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120801947 (usp9)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120801947 (usp9)
Ubiquitin system [BR:
xgl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120801947 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
120801947
NCBI-ProteinID:
XP_040005239
LinkDB
All DBs
Position
LG16:20896369..20934764
Genome browser
AA seq
2610 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILTRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
VQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPT
ALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETG
VEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSG
EFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQE
NESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVI
QQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTE
CKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVK
YISELTISSSKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNP
PPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGPSAQG
CDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDTNLTA
PVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLWQVA
YSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQ
CIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPV
QSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPEDT
SLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTPTPGPGPTPG
PGPRAQENWESTEEVTPAPTSTPAPAPPKE
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaatgatagtcagggccagggccag
gcacctgatgctcagagccaacctccactgccacagaaccagacatcatctcctaactca
tctaatgagaactctccagtcagcccaccagatgagcagggccagggggatgggcctcct
cagctggaagaggaggagcccgccttccctcacactgacctagccaagctggatgacatg
atcaacaggcctcgttgggttgttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctatagacctgagtaaaaaaggactggatgtgaagtgtgaggcatgtcagagg
tttttccgagatggtctgaccatctccttcacaaagatactgacagacgaggcagtcagt
ggctggaagtttgagattcataggtgtatcatcaataacacacaccggttggtggagttg
tgtgtggccaagctctctcaggactggttccctctacttgagctgctggccatggccacc
aaccctcactgcaaattccacatctacaatggcacacggccctctgagaccgtccctgct
ggagcacagctggctgatgatgaactctttgcccgaccaccagacccacgatctcctaag
ggctggttggtggacttaataaacaaatttggcacgttaaacgggtttcaaatgttgcac
gatcgctttatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaaacct
tttggccagtgttatgagttcctcacattgcacacggtaaagaagtacttccttccagtc
atcgaaatggttccccagtttctagagaatctcacagatgaggagctgaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtccatgataatcaagtctctgaagaatctggct
tctcgtgtaccagggcaggaagagaccgtgaagaacttagagatttttaggttaaaaatg
attcttaggttattgcaaatttcttctttcaacggcaaaatgaatgcactaaatgaagtt
aacaaggtgatctccagtgtgtcctactacactcatcggcataaccctgaagaggaagaa
tggctgactgcagagcgcatggcggagtggatccagcagaaccacatcctgtccattgtg
ctcagggacagtttgcaccagccacagtatgtcgagaaactggagaagatccttcgcttc
gttatcaaagagaaagctcttacaatgcaggatctggacaacatctgggctgcacaggct
ggtaagcatgaggccattgtgaagaatgtccatgacctcctggccaagctggcatgggac
ttctcacctgagcagcttgatcacctttttgactgtttcaaggcaagctggaccaatgcc
agcaagaagcagcgtgaaaaattgctggaacttatccgacgcttggctgaggatgataaa
gatggtgtgatggcccacaaggtcctcaacctgctgtggaacctggcacacagcgatgat
gtgcctgtagacatcatggaccaggctcttagtgctcacatcaagatactggattacagt
tgctcacaggacagagacacgcagaaaatccagtggatagatcgcttcatagaggaacta
cgaaccaatgacaaatgggtgatcccggccctgaagcaaatcagagaaatctgtagcctc
tttggagaagctcctcaaaaccttagaaagaaaatgccaattaacatacaaacgaactta
gtgggtcaaacccagagaagtcctcatgtgttttaccgccatgacctgatcaaccagcta
cagcataatcatgctctggtgaccctggtggccgagaacctctcagcctacatggagact
atgaggcagttctccaaagaagaacaagctgagtttgacccccagacggtcaggccagga
agccgctacagccatgtccaggaagtacaggaacgactcaacttcctgaggttcctgcta
aaggacggccagttgtggctgtgtgcccctcaggccaagcagatctggaagtgtctggct
gagaatgcagtgtttctctgtgaccgtgaggcctgcttcaaatggtactccaagctgatg
ggtgatgagccagacctggacccggacatcaataaggacttctttgagaacaacgttctg
cagttggacccatctctgctgacagagaatggcatgaaatgctttgagaggttcttcaag
gctgttaactgcagggagggcaagctggtagcaaagcgcagggcctacatgatggatgac
ctggaactaataggcttggactacctctggagggtggtaattcagggaagtgatgacatc
gccagccgagcaatagacctgctgaaagagatctacaccaacctcggaccaaaactacaa
gtcaatcaggttgaaattcatgaggatttcatccagtcatgttttgaccgtctaaaggca
tcctatgacaccctgtgtgtgttggatggagacaaagacagcatcaactgtgctcgtcag
gaggccatccgcatggtgcgagttctcactgtgctgaaagagtacatcaatgagtgtgac
agtgactaccatgaggagaggactatactgcctatgtccagagcgttccgtgggaagcat
atcacattgatcgtacgcttccccaaccaggggcgtcaggtggatgacctggatatctgg
tcgcacaccaatgatacaattggctcagttcggcgttgcatcctaaccaggatcaaagct
aatgctgcacataccaaaatagagctctttattggtggagaagttgttgatccagctgac
gacaggaagctgattggacagctcaatttgaaggacaaaacgttgatcacggccaagctg
acccaggtgagtgccaatatgccctcaagcccagacagctcctctgactcatccactggc
tctcctggtaaccatggcaaccactacagcgatgggcccaacccagaggtggagagctgt
cttcctggtgtgatcatgtcgctgcatctgcgctacatctccttcctgtggcaggtagct
gacctgggctgcaacctcaacatgcctctgcttagagatggagctcgagttctcatgaaa
ctcatgcccccagataacactacagtggagaatctgagagctgtgtgtctggaccacgct
aagcttggtgagaacagcctcagtccttcactggactcgcgcttcttcggcccatcaccc
tcacaagtgctctacctcattgaggttgtgtatgctttgctgatgccagccagtgccact
ctgggcgaggatgccagtgacttccagtacaacttcttgaagagtggcgggctgcccctg
gtgttgagcatgctcacacggaacaacttcctcccatcagcagatatggagacgcggcgt
ggggcttacctcaatgcgctgaagattgccaagctcctcctgactgctgtgggctttgga
cacgtgaaggctgtggctgaggcctgccagcccaacgcggagggaaatattcctgtctct
ccgattaaccaggccactcatgaccaggccctggtcctccagagtgctctgcaaaacatc
cctaaccctgcctcagaatgcatgttgcgcaacgtagctatccgcctggcccagcagatt
tctgatgagaatttcttccaggcatcaaagtacatcccagacatttgtgtgatccgcgcg
gtacagaaaatagtgtgggcatcgggctgtggtacagtgcagcttgtcttcagttccaat
gaagaaatcagcaaaatatatgagaagacaaatgcagctaaggagccagatggggaagat
gagcaggtgtgctgcgaggcactggaagtgatgacactgtgttttgctctgatgcccacg
gctttggacacactcagtaaggagaaggcttggcagaccttcatcatagacttgctgcta
cactgccatagcaaatctgttcgtcagatggctcaggagcagtttttcctgatggcaact
aggtgctgtatgggccaccgacccctcctcttctttatcaccctcctattcactgtgcta
gggagtacagccaaggagcgagccaaacatgctggggactacttcactttgctcagacat
ctgctgaactatgcctataacagcaacatcaacctgccaaatgctgaggtgctgctcaac
aatgagattgactggctgaaacggataagggatgaggttaagaggacaggggagactggt
gtggaggagaccatcctggagggccaccttggggtcaccaaagaacttttagccttccag
acaccagagaagaaatattacatcggctgtgagaagggaggagcaaacctcattaaggag
ctgattgacgacttcatcttcccagcatccaatgtttacctgcagtacatgaagagtggg
gagttccccacagagcaggccatcccagtgtgtagcacccctgcttcgatcaacgctggc
tttgagctcctggtggcactggctgtcggctgtgttcgcaacctcaaacagatagttgac
actctgactgacatgtactacttaggttgtgaaacattgacagagtgggagtacttgcct
ccagtggggccacggcccaacaaaggctttgtaggtctgaagaatgccggggccacctgt
tacatgaactctgtcattcagcagctttacatgatccctcccatccgcaacggcatcctt
gccattgagggtacaggcactgatgtagacgatgacatgtcaggggatgagaagcaggag
aatgagagtaatgtggatcctcgtgatgaggtgttcagctaccaccatcagtttgatgat
aagccctcgagtaagtcagaggacaggaaagagtacaacattggggtactgcgtcaccta
caggtcatctttggccatctggctgcttccagactgcagtactacgtccctaggggattc
tggaaacagttcaggttatggggtgagccagtgaacttgcgggagcagcatgatgctctg
gagtttttcaactctttggtggacagtctggatgaagctctgaaagccctgggccaccct
gccatgctcagcaaagtgctgggagggtcctttgctgaccagaagatctgtcagggatgc
ccccataggtatgagtgtgaggagtcattcacaacactcaatgtagacatcagaaaccac
cagaacctgttggactcaatggaacaatatgttaaaggagatctgctggagggagccaat
gcctaccactgtgagaagtgtaataagaaggtggacacagtaaagcgcttgctgattaag
aagctgccacctgtcctggccatccagctgaagcgctttgactacgactgggagagggag
tgtgccatcaaattcaatgactactttgagttccccagggagctggacatggagccgtac
acggtagctggtgtggccaagctagagggtgatgacgtcaacccggagaaccaggtgatc
caacagaacgagccctctgaacccacaccaccgggcagctctaagtatcgtctggtggga
gtgctggtccactcaggccaggccagtggcggacactactactcttacataatccagagg
aacgggggtgatggcgagaagaaccgctggtataaatttgatgatggtgatgtgactgag
tgcaagatggacgatgaggaggagatgaagaaccagtgctttggaggggagtacatgggg
gaggtgttcgatcatatgatgaaaaggatgtcgtaccgaaggcagaagcgctggtggaat
gcctacattctattctatgagcgtatggactcactggacaaagacagcgagcttgtgaaa
tacatctcggagctgaccatctcctccagcaagccacatcaggtcaagatgcctggtgtc
atcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaaccgaatgcaatacagc
ctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctatttaaaccct
cctccaggacaagaccatcttctgccagaggcagaggagattgctatgataagtgctcag
ctggctgctaggttcctcttcagcacaggttttcacaccaagaaagtagtacggggtcct
gccagtgactggtatgacgccctctgcatcctgctgagacacagtaagaatgtacgctat
tggtttgcacacaacgttctgtttgcttaccctaaccggttctccgagtacctgcttgag
tgcccgagcgctgaggtccgtggtgcatttgccaagctcattgtcttcatcgctcacttc
tccctgcaagacggtccctgcccctcccccaccgcctcgcccggaccctctgctcagggc
tgtgataacctcagtctaagtgaccacctgttgagagctgttctcaacctgctcagaaga
gaggtttctgaacacggccgtcacctgcagcagtacttcaacctctttgtcatgtacgca
aatctgggcttggcagaaaagacccagttgctcaagctgaatgtcccagccacattcatg
ttggttgctctggacgagggtcctggccctcccattaaataccagtatgctgagctgggc
aagctctacactgtggtttcccagctggttcgctgctgtgacgtctcctcacgcatgcag
tcctccatcaatggtaaccctccgcttccgaacccatatggggacaccaacctgacagcc
ccagtgatgcctgtgcagcagctggtggcagagatcctatttgtgaggaccagctacgtg
aagaagatcattgaagactgcagcaactccgaggagacagtgaagctgcttcgcttcagc
tgctgggagaatccccagttctcctccactgtgctcagtgaactactctggcaggtggcg
tactcctacacttatgagttgaggccttacctggacttgctgctacagatcttgctcatc
gaggactcgtggcagacacacaggatccacaacgtgctgaagggaattccagatgacaga
gatgggctttttgacaccatccagcgctccaagaaccactaccagaaacgggcctaccag
tgcatcaagtgcatggtggccctgttcagcaactgctctgtggcttatcagatcctgcag
agtaatggtgacctgaaacgaaagtggacgtgggcagtagagtggttaggggacgagctg
gagaggaggccatacacagggaacccgcagtacacctacaacaactggtcccctccggtt
cagagcaacgagacctctaatggatatttcctggagcgttcgcacagtgcacgtatgaca
ctggccaaggcctgtgaactctgtcctgaggagctcaagtgtactcagggaagcccaggg
aaggagccagatgaacaggaggcacctgatgatcaagactcctccccacccgaggacacc
tctctgtacccacattctcctggaaccacccagtttcagcagaacaaccacccccatggg
cagccgtataccgggcctgctgctcagcacatgaacaacccccagcgtcctggtcctgcc
tctgccccgactcctggccctacccagacccccaccccaggccctggtcccactcccggc
ccaggcccgcgagcacaagagaactgggagagcaccgaggaggtcacccccgcccccacc
tctaccccagcacctgccccgcctaaggagtaa
DBGET
integrated database retrieval system
