Xiphias gladius (swordfish): 120802121
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Entry
120802121 CDS
T07311
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xgl03009
]
120802121 (ddx52)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120802121 (ddx52)
Ribosome biogenesis [BR:
xgl03009
]
Eukaryotic type
90S particles
Helicases
120802121 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
120802121
NCBI-ProteinID:
XP_040005541
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Position
LG17
Genome browser
AA seq
672 aa
AA seq
DB search
MDAFELFRKLGAGAKFDLKRFGQDAVRFKVVRCHKGEASLDPLSAIDYFGTGPVSGAQSR
TTVLEEEDGGGGGGGEEYEEGSESGDSGAGAKRKRKDEESGVRKKKKKKKTKRNQVEVEA
GGGPLKDTEGNGITWTSALDIKIQNLPSDGKEKNSLKRLKHQHQEKVNRIRSQHRINVHG
CDIPDPVCTFEELQSEYRLNLRVLQNLKDAGLNSPTPIQMQAIPLMMHGRELLACAPTGS
GKTLAFCLPLLAHLQQPANLGFRAVIISPTRELASQTYRELLRLSEGVGFRVHIIDKASL
AAKKYGPQSNKKYDILVSTPNRLIFLLQQDPPALDLSSVEWLVVDESDKLFEDGRTGFRE
QLATVFLACSGSKVRRAFFSATCTLDVEQWCRLNLDNLVSVNIGHRNTAVKTVEQQLLFV
GTESGKLVAMRDIIKKGFLPPMLVFVQSIERARELFHELVYEGINVDVIHADRTQQQRDN
VVNSFRAGKIWVLICTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGTAI
TFFTENDKPLLRNIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEKQPPKRSTICTTPRFL
MKKKGKAQEQKQIVGGEQKEEKKTKGQGLKKNKKQKEEGTEKHKKASQKMGSDSSGAKLK
KKKGRKNKQQED
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcgagttgtttcggaaactcggagctggggctaagtttgacttgaagagg
ttcggtcaagacgccgttcggtttaaggttgtcagatgtcacaaaggggaagcgtcctta
gatcctctatctgcaatcgattactttggcacaggaccagtcagtggagctcagagcagg
accacagtattggaggaggaggatggtggaggaggtggaggaggagaggagtatgaggag
ggaagtgagagtggagactctggtgcaggagcgaaaaggaagcgaaaggatgaagagagc
ggcgtgaggaagaagaagaaaaagaaaaagacgaagagaaaccaggtggaggtggaagct
ggcgggggaccgctgaaagacacggagggaaacggcatcacctggacctccgcattggac
ataaaaatccagaacctgccgagtgacgggaaggagaaaaactctctgaagaggctgaag
catcagcatcaggaaaaggtgaaccgtattcgctctcaacaccgtataaatgtgcacggc
tgcgacatacccgaccctgtgtgcacatttgaagagctgcagtctgagtatcgtctcaac
ctgcgtgtccttcagaacctcaaagacgcagggctgaactccccgacgccgatacagatg
caggcaataccgctcatgatgcacggtcgggagctcctggcctgcgctcccacaggatcg
ggaaagactctggctttctgtctcccgctgctcgctcacctgcagcagccggccaatctg
ggcttcagagctgtgattatctccccaaccagagaactggccagccagacctacagagag
ctgctccgcttgtcagagggagtcggttttagagttcacatcatagacaaagcttccctg
gcagccaagaagtatggaccacagtcaaacaaaaaatacgatatactcgtcagtactcca
aacaggctcatcttccttctccagcaggatcccccagccctcgacctcagcagtgtggag
tggctggtggtcgatgagtccgataagctgtttgaagatggtaggacgggcttcagggag
cagctggccacagtgtttctagcctgctctggttcaaaggtgcgcagggctttcttcagc
gccacctgcacgctggacgtagagcagtggtgccgtctgaacctcgacaacctggtgtca
gtcaacatcggacacagaaatacagctgttaagacggtggaacagcagctgctgtttgtc
ggtacggagagcggcaaactggtggccatgagggacatcatcaaaaaaggttttctgcct
cccatgctggtgtttgttcagtctatagagcgagcacgggagcttttccacgagttggtt
tatgagggcatcaatgtagatgtgatccacgcagaccgcacacagcagcagagggacaat
gtagtgaacagttttcgcgctggtaagatttgggtgttgatctgcacggctctgctcgcc
agaggaatcgacttcaaaggagtcaaccttgtgctgaactacgacttccccaccagcgct
gtggaatacatccaccgaattggtcgcacgggcagagctggacatcaggggacggccatc
accttcttcacagaaaatgacaagccactgctgcgcaacattgctaatgtcataaaacaa
gctggatgtcctgtacccgattacatgattggcttcaagaagatacacagcaaagtgaag
cgcagacttgagaagcaacctcccaagagaagcaccatttgcacaactcctcgcttcctg
atgaagaaaaaaggcaaagcacaagaacagaagcagatagtgggtggagagcagaaagaa
gaaaagaagacaaaaggacagggacttaagaaaaataaaaaacagaaagaagagggaaca
gaaaaacacaagaaggcgtcacagaagatgggatcagattcctctggagccaagttaaaa
aagaaaaaagggaggaaaaataagcaacaagaagattag
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