Xiphias gladius (swordfish): 120802289
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Entry
120802289 CDS
T07311
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120802289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120802289
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120802289
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120802289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
120802289
NCBI-ProteinID:
XP_040005889
LinkDB
All DBs
Position
LG2:1451840..1465692
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AA seq
541 aa
AA seq
DB search
MFGANRKKFMEGGVESDYADDSSLYYSQQSMFTPHRPDKDMLVSSPASSTGQLSQLGASL
YGPQSALGFPMRGINSSAAPQLSRSGLNQSASQLSSHASTPNTGTMHTPPSPSRGILPMS
SRSVLNHSQQVGGPTGQTGGMGGGGVGERGGGGGGGGRSGSMGSPSRSSPSIIGMPKQQQ
ARQPFTINSMSGFGVNRNPGFSLNNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRRDG
GSNPTPLLNPLAGRAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDPTSTSEDSK
TNLTSSGKPTSNSDGPKFPGDKSSVPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFGMIG
LLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPS
EYLTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWI
TRAPGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQA
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaccggaagaagtttatggaggggggggtggagagtgactatgcggat
gactccagcctctactacagccaacagtccatgttcactcctcaccgccccgacaaagat
atgctggtgtcttcccctgcttcgtcaacgggtcaactgtcacagctaggagccagctta
tatggcccgcaaagtgctttggggtttcccatgcgtggtataaacagcagcgcagcacct
cagttaagtcgaagtgggctgaaccagtctgccagccagctctccagtcatgccagtaca
cccaacactggtacaatgcacacgcctccctcaccgagcaggggtatcctgccaatgagc
agccggagcgtgctgaaccacagccagcaggtggggggtccgacgggtcagacgggaggg
atgggagggggtggagttggagagaggggaggcggcggcggtggaggagggaggagtggc
agcatggggagccccagccggtcgtcacccagcatcatcggcatgcccaaacagcagcaa
gcaaggcagcctttcactattaacagtatgtcagggtttggggtgaacaggaatcccggc
ttcagcttgaacaactcgctatccaacaacatcttcaatggcacagacggcagtgaaaat
gtgacggggttggacctgtcggattttccggcgttagcagacaggagtcggagggacgga
ggctcgaatcccaccccgctgctcaacccgctggccggacgggctccttacgttggcatg
gtaaccaagccgtccagtgagcagtcgcaagacttctccatccacaacgaagatttccct
gctcttcctgggccaaactaccaaacaaaagaccccaccagcaccagcgaagacagcaaa
acgaacctgacctcatcaggaaagcccacgtctaactcagatggtccaaagttcccaggt
gataagagctctgtgcccagcaacaacaaccagcagaagaaggggattcaggtgcttcct
gatgggcgtgtgacaaacatcccagttggcatggtaacggaccagttcggaatgatcggc
ttgctgacgttcatccgggcggcagagacggatccgggtatggtccacctggcgctgggt
tctgacctcaccacactcggcctcaacctcaactcgccagagaatctctatcctaagttt
gcgtctccctgggcgtcagctccatgtcgaccgcaggatatagacttccacgtcccctca
gagtatttaaccaacatccacataagggacaagttagcagctatcaagttgtctcggtat
ggtgaagacctgctgttttatctctactacatgaacggaggagacctactacaactcctg
gctgcagtagaactcttcaacagggactggaggtaccataaagaggagcgggtttggatc
acacgggccccgggtatggagcccacgctgaagaccaacgcctacgagagagggacctac
tacttcttcgactgcctcaactggaggaaggtggccaaggagtttcatctggagtatgac
aagctagaagagcgacctcacgttccctccacgttcaactacaatcctgcccagcaggcc
ttctga
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