Xiphias gladius (swordfish): 120802320
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Entry
120802320 CDS
T07311
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120802320 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
120802320 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120802320 (pdlim4)
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Motif
Pfam:
DUF4749
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120802320
NCBI-ProteinID:
XP_040005938
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Position
LG17:12263496..12309322
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AA seq
383 aa
AA seq
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MVSFRRFPGCSFRQARTIDATSCIVSANRAKDNRWCSPRISCCRRICGVPETVTPGSKAA
QGDLCPGDTILAINGDSTEQMTHMEAQNRIKTCTQQLTLNISRSGSGEGVWSPTVSEDGK
TSPYTEPDSQNFRPITSGYGGYSRKPSYTPEPQSPQATQPTHLNNGHSRPNNGHSYGYGN
GTGHAPYNNPAGLYAGSNGDRSLPSKMGGLSLSTTHSPEPPIHSPVGPNGFDTQSDVYKM
LQDYEEPASEPKQSGSFKYLQGILEAEDGGVSPTERMRNLKSPVRSPIPKLGSPIPSPMS
GLQKLPQCTRCSNGIVGTIVKARDKLYHPECFMCDDCGINLKQRGYFFIEDNLYCETHAK
ARVQPPEGYDVVAVYPNSKVELV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggtcagctttcggcggttcccgggctgctcctttcgccaggctagaactatagatgct
acgagctgcatcgtctcagcaaaccgagcaaaagataacagatggtgctctccaagaatt
tcctgttgtcggcgaatttgtggagttcctgaaacagtaacaccaggcagcaaggcagcc
caaggtgacctgtgtccaggtgacaccatcctggctatcaatggcgacagcacagagcaa
atgacacacatggaggctcagaacaggatcaaaacctgcactcagcagctcacactcaac
atcagcaggtcgggatcaggagaaggagtgtggtcgccaactgttagtgaagatggcaag
acaagcccttacacggagcctgactcacagaatttccgtcccatcaccagcggatatggc
ggttacagccgtaaaccctcatacaccccggaaccccagtccccgcaggctacccagccc
actcacctgaataacggacactccagacccaacaacggccacagctatggatacggaaat
ggaaccgggcacgctccgtacaacaacccagccggactttatgctggcagcaacggagac
agatctctgccaagcaagatggggggtctcagcctcagcaccacacatagcccagagcct
cccatacactcccctgtgggccctaatggtttcgacacacagtcagacgtctacaagatg
cttcaggactacgaggagcccgcctctgaacccaaacagtctggctccttcaaatatctc
cagggaatccttgaggctgaggacggaggtgtgtccccaacagagagaatgagaaactta
aagtctccagtcaggtctccaatccccaaactgggaagccccatccccagccccatgtct
ggtcttcagaagctaccccagtgcacacgctgctctaatgggattgtcggcaccatcgtg
aaggccagggacaagctctaccaccccgagtgctttatgtgcgacgactgcggcatcaac
ctcaagcagaggggctactttttcatcgaggacaatctgtactgtgagacccatgccaag
gcacgcgtccagcccccagagggctacgacgtcgttgcagtgtaccccaactccaaggtg
gagctagtctga
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