Xiphias gladius (swordfish): 120802347
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Entry
120802347 CDS
T07311
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120802347 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120802347 (exosc8)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120802347 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120802347
NCBI-ProteinID:
XP_040005997
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Position
LG17:complement(7812146..7815717)
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKIGNTTVIC
GIKAELTNPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQLVADVIESSEVIQ
TEDLCIERGKLCWVLYCDMMCLDYDGNVLDACIVALLAALKNTQLPEVTINTETLTPEAD
LEKRHGLHIRKHPVATSFCIFDNSILIVDPTSEEESLATAQLTVVTDEEDRLCSVHKPGG
TSLSGEKLQECIGRATARQREIQKLVEKVIRSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagactgctgagcctctggagtaccaccggagctttctgaaagaa
aactgccgacccgatggacgagagctgtcagaattcagaaccacaacactgaacataggc
tccatatccacagcagacggctcagccctggtgaagattggaaacaccacggtcatctgt
gggatcaaagcggagttgacaaaccccacagtggaagcacctggtaaaggttacattgtg
cccaatgtggacctgccgcctctgtgttcgtctcggtttcgaccgggcccgccgggagaa
caggctcaggctgccagccagcttgtcgccgatgttatcgaaagctctgaagtgatacaa
acagaggacttgtgcattgaaagaggaaagctctgctgggtgctctactgcgacatgatg
tgtctcgactacgacgggaacgtgttggacgcttgtattgtcgccctgctggctgccctg
aaaaacacacaactcccagaggtcaccatcaacacagagacacttacaccagaggcggac
ttagaaaagaggcatgggctgcacattcgcaaacatccagtcgccacctctttttgtatc
ttcgataactccatactgattgtcgaccccacatccgaggaggagagtctggcgactgct
cagcttactgtggtgacagatgaggaagatcggctctgctctgtacacaaaccaggtggg
acatcactgtcgggagagaagctgcaagagtgcattggccgagcaacggcgcgacagaga
gagatccagaaacttgttgaaaaagtcatacgtagtgtgaagacagcgcaataa
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