Xiphias gladius (swordfish): 120802349
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Entry
120802349 CDS
T07311
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120802349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120802349
03036 Chromosome and associated proteins [BR:
xgl03036
]
120802349
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120802349
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120802349
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120802349
NCBI-ProteinID:
XP_040005998
LinkDB
All DBs
Position
LG17:complement(18657631..18685260)
Genome browser
AA seq
1917 aa
AA seq
DB search
MSAAMLSTTTNKLNVLVNKLHEYLAHSTVEDSNGTPTSEDADGLTNRSCSVGNSTGHTAF
EAAVDTKYSRRKPSVVIKHSGLDESGDSNASEDLDLPVNANGHLDINRLPKGTVLVRPEP
VDNGRDDFRGPEFRSRKSSVLRKEFSRRRGGVEHMGIVSCTACGRQVNHFQRDSFYRHPV
LKVLICKSCYKYYLSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRK
ELSGILESKWYCYVCSPEPLFDLVMACDSVLENMERLWHQQRRRNRAEPEKSLLYGDMLP
HLPQNIPLDKWDHTGMDGNVVFNYNTLQISKDMTKKAKHLVDSTNTLNRIFINFIHTVTT
NKQTPGVRHLYLKHFMSVVKGLRKSLTVLEDSLKEEFSDLDVFSCWEKFLSDDFDTQPVT
DTELDISDERCLRDLQKLAAEHLEDDDSDSKGFIDGRNTHDCPGEDMESDSHEARPRTQK
VGPKPPETGVNMTKKLIVKLTPVAMEQEPSSHVPKMEEDIHMKDKKSKGKDVSEDKETGV
ACAKTDSKMSNDNSSASLHLEEEQGNRRSPRVKTTPLRRPSDVKAKSSLSAADSDSDSDP
EETPSAVPAKNTEEQSANRATDDSDSDEVPPALLERAAMTQSSDEPQSDEDGGKASTKVA
KKCLFWLTKSTPISPEKMRHKRKMLDRSPESDSSDRRVKARRESGTDSSSDDQDLQKKIQ
HLNTLRSIGKPHLIKREEEGVARKQGRMQAGKSKTKASQEAMELSSSSSEDEHDDDSGSD
GSDQKMKPITEDVALLGAAAFHQSSGDEEQSGPSWAAEDDDDPENRIAKKMLLAQIKANY
SSGDDISSDEETQEEETESEDDKEVKLGNEDNGTDENGEDLASQSSDTTSDGPNSRHHLL
RHKLTLDERPSSDKAVAEREVRKQEKKKRVSRKHLSSDSESGGESIESKLEDLGLSEELS
QSEDDTNEETLKSSRLSAKVKEAHGSCERKKQVPCIWLPDSSSGKSDQEDGDKEMESKGT
PKRRKKIHRIIEDVNLSAETQEALREEEERCKRLADRDQQMEDRREIIVREDELYQVVCP
ITTKLVLDQDEETKKPLVQVHANLVTRLKPHQVDGVQFIWDSCCESVKKANSSPGSGCIL
AHCMGLGKTLQMVTFLHTVLLSTNLKFRTALVVCPLNTILNWVSEFKKWQDNMGEDKVKV
TELVTIKCPTEQLRALQRWQRGGGVMIMGYERYRILSQAQKINNEEWKSELKSILVDPGP
DFVVCDEGHILRNDASSISKAMNAIKTRRRVMLTGTPLQNNLVEYHCMVNFIKKNLLGSL
SEFRNRFINPIQNGQCADSTPKDVRIMKKRAHVLHAVVAGCVQRRDYSELTQFLPPKHEY
VLSVRVSPLQYKLYRYYLDHIAGLGSMTNRAKMTAGANLFKDFQVLSRIWTHPWCLQLSY
IHKGNKKTQVKAAALLRHEEATVAESGLRENKGTARNNPNNSRMVITDVSKGAPAVEGEN
QATISSGSPCTDEGWYKNLLSEMDAKILDHSGKMVLLFEILRMAEDLDDKVLVFSQSLIS
LDLIEDFLEASHRARDPSSFKVASWIRNLDYYRLDGSTSAMSRKKWAEQFNNTANIRGRL
FLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTME
EKVYDRQVTKQSLSYRVVDQQQIERHFTLSELTELYIFEPDLLNDPNSKKSKKTTSVLPK
DKVLAQLLQTCKDQIVSYHEHESLLDHKQEEELSEAERKDAWAEYEAESNTASISVSSSQ
ETLDMKTNEQLLEMLNKCRADVSAAFLSLQRMRSNTIEDYMLRTRHQYPHLPEDNIKNKA
RIWRLCDEKEQERRQAFYRDVLAQQQSLTLRIQAILSHRRNQAMQTTVTTVNQPGQI
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcgatgctcagcaccactaccaacaagctgaatgtattggtcaacaagctg
catgagtacttggctcattccaccgttgaggacagcaatggcacaccaacctcagaggat
gctgatggtctgacaaaccggagctgctctgtgggaaactcaacaggtcatactgcattt
gaggcggcagtggataccaaatactcaaggagaaaaccttctgttgtcataaaacactct
ggactggatgaatctggggactcaaatgcaagtgaggacttggatttaccggtcaacgca
aatggtcaccttgatatcaatagactgcctaaaggcactgtattggtcaggcctgaacct
gttgataatggaagagatgactttaggggtcctgagtttcgcagccggaaatccagtgta
ctgcggaaagagttctcgagaagacgtggaggagttgaacacatgggaattgtcagttgc
actgcgtgtggcagacaagttaaccacttccagagagattccttctatcggcatccagtt
ctgaaagtacttatttgcaagtcatgctacaagtattacttaagtgacgacatcagcaag
gatggagatggaatggatgagcagtgcagatggtgtgctgaaggaggcaacttgatttgt
tgtgacttctgtagtaatgctttctgcaaaaagtgtattctaagaaatttgggaaggaag
gagctttctggcatcttggagagcaaatggtactgctatgtgtgtagcccggagcccctt
ttcgacctggtgatggcctgtgacagtgtcctcgagaacatggagcgtctgtggcatcag
cagcgcagaaggaaccgagcagagccggagaaatctttactttatggcgatatgttgcca
cacttaccacaaaacattcctttggataaatgggatcacactggtatggatggtaatgtg
gtgttcaactataacacactgcagatttcgaaggacatgaccaaaaaggctaaacattta
gtggactcaacaaacaccttaaaccgaatttttatcaatttcattcatactgtgacaaca
aacaaacaaacacctggtgttcgccatctgtatctgaagcattttatgtcagtagttaaa
ggcttgcggaaatcacttacagtacttgaggatagccttaaggaagaattcagtgacttg
gatgtatttagctgttgggaaaagttccttagtgatgactttgatacacaacctgtaaca
gacacagagctggatatctctgatgaaaggtgcttgagggacttgcagaaattggcagct
gaacatttggaggatgatgattctgactccaagggcttcatagatgggagaaatacacat
gactgccctggggaggacatggaatcagattcacatgaagccagaccgaggacacaaaag
gttggcccgaagccccctgaaacaggggtcaacatgactaaaaaactaatagtaaaactt
acacctgtagctatggagcaggagccttcctctcatgtcccgaagatggaggaggacatc
cacatgaaggataaaaagtcaaagggaaaggatgtatcagaagataaagagacaggtgtt
gcatgtgcaaaaactgacagcaagatgagcaatgacaactctagtgcatcattacaccta
gaagaggaacaaggcaatagacggtctcctcgtgtcaaaacgacacctttgcgtcgacct
agtgatgtcaaggccaaatcgtctctttcagcagcagacagtgacagtgactctgaccct
gaggaaactcccagtgcagtaccagccaaaaacactgaagaacaaagtgcaaacagagca
acagacgactctgactcagacgaagtccctccagctctgcttgagcgagcggctatgacc
caaagctctgatgaaccccagagtgatgaggatggtggaaaagcatcaaccaaggtggcc
aagaaatgtctcttttggctcactaagagcaccccaatctcaccggagaagatgcgccac
aaacgcaagatgctggaccgctctcctgagtctgactcaagtgacagaagagtcaaagct
cgaagggaaagtgggacagattcctccagtgacgatcaagacttgcagaagaaaatacaa
cacttgaatacactgaggtcaatagggaagcctcacctcatcaaaagagaggaggaaggt
gtggctagaaagcagggtaggatgcaggctgggaagtctaagactaaagcttctcaggaa
gcaatggagttgtcatcgtcatcaagtgaagatgaacatgatgatgactctgggagtgac
ggaagtgatcagaagatgaagccaatcactgaagatgtggctttattgggggcagcagca
ttccaccaatcatcaggggatgaggagcaatctgggccctcgtgggcagcagaagatgac
gatgatccagaaaatagaatcgctaagaaaatgctattggcccaaatcaaagccaactac
tcctcgggtgatgatatctcttcggatgaggaaacacaggaggaggaaactgagtcggag
gatgacaaagaggtcaaactaggcaatgaggataatggaacagatgaaaatggggaggac
ttggcttcacaatcatctgacaccacgtctgatgggccaaactccaggcatcatctgctc
cgccataaactcaccttagatgagcgaccatcaagtgacaaggccgtggcagagagggaa
gtacgaaagcaggagaagaagaaaagagtcagcagaaaacacctgagctctgatagtgaa
agtggtggtgagagtatagaatcgaagctggaagaccttggattgagcgaggagctgagt
cagtcagaggatgacaccaatgaagaaacgctaaaaagctccagattatccgctaaagtg
aaggaagcacacggtagttgcgaacggaagaagcaagtgccctgcatttggttgcctgac
tccagcagtggaaagagtgatcaagaggatggagataaggagatggagagtaaaggtact
cccaaaaggcgcaaaaagatccacagaattattgaagatgtgaatctcagtgctgagacc
caggaagcactgagagaggaggaggagagatgcaaacggttggcagatagagatcaacag
atggaggacaggagagagataattgtcagagaggatgagctctatcaagtggtgtgtccc
attaccaccaagctggtcctggatcaggatgaggagacaaagaagccacttgttcaggtg
cacgcgaacctggtgacgagactgaagcctcaccaggttgacggtgtccagtttatttgg
gacagttgttgtgagtctgtcaagaaggcaaactcttctccaggatcaggctgtatactg
gcacactgcatgggcctggggaagactctgcagatggtaacattcctccacacggtgctg
ctgtcaacaaacctgaaattcagaacagccctggtcgtgtgtccacttaatactatcctc
aactgggtcagcgagttcaagaaatggcaagacaacatgggagaggataaagtcaaggtc
acagaactggttacaataaagtgtcctacagaacaacttagagctctgcagaggtggcag
agaggcggaggcgttatgataatggggtatgagaggtaccgcatcctgtcacaagcccag
aaaatcaacaatgaggaatggaagtcagagttaaagagcatactggtggatccaggccca
gactttgtggtttgcgacgaggggcacattctgcgcaatgatgcatccagtatctccaaa
gctatgaatgccatcaagacccgacgaagagtgatgctaactggcacaccactgcaaaac
aacctggttgagtaccactgcatggtcaatttcatcaagaagaatcttctgggctcattg
agcgaattccgaaaccgctttatcaaccccatacagaatggccagtgtgctgactccacg
ccaaaagacgtccgaatcatgaagaagcgagcacatgtacttcatgcagtggtggctgga
tgtgtgcagagaagagattactctgagttgactcagtttctacctcccaaacacgagtat
gtgctgtcagtgagggtttccccgctccagtataagttgtaccgctactaccttgatcac
atcgctggtctgggttccatgactaacagagcaaagatgacggctggagcaaatctgttc
aaggacttccaggtgctcagccgaatttggactcatccctggtgccttcagctcagctac
atccacaaaggaaacaagaaaactcaggttaaagcggcagctctgctgagacatgaagag
gccactgtggctgagagtggactgagagagaacaaaggaacagcaaggaacaaccccaac
aacagtaggatggtcatcactgatgtttccaaaggagctccagcagtggaaggagagaac
caagcaaccattagctcagggtctccgtgtacagatgaaggctggtacaagaacctgctg
tctgaaatggacgccaaaatcctggaccactcagggaagatggtgctcttgtttgagatt
ctcagaatggctgaagacctggatgataaagtgcttgtgttcagtcagtccttgatctca
ttagacctaattgaggatttccttgaggcttctcaccgtgccagagacccatcatcattc
aaagtagccagctggattagaaaccttgattactatcgtcttgatggctccaccagtgct
atgtccaggaaaaaatgggcagagcagttcaacaacactgccaatatccgcggacgattg
tttctcatctcaacgagagcgggttctcttggcatcaaccttgtggctgccaacagggtt
atcatctttgatgcttcatggaacccgtcatatgacatacagagcatatacagagtgtat
cgctttggtcagctgaagcaagtgtttgtgtaccgcttcttggctcagggcaccatggag
gagaaggtctatgatcgtcaggtgaccaaacagtctctgtcctatcgagtggtggatcag
cagcaaattgagaggcacttcaccctttctgaactgactgaactttacatatttgagcca
gacctgctgaatgacccaaactccaagaaaagcaagaaaaccacctctgttttgccaaag
gataaggtcctggcacagctattacaaacctgtaaagaccagatagtgtcataccacgag
catgaatctctgctggaccataaacaagaggaggagctcagtgaagcagaacgcaaagat
gcctgggccgagtacgaggctgagtcaaacacagctagcatatcagtgagctcgagccag
gagaccttggatatgaagaccaatgaacagctattggaaatgctaaacaagtgccgagca
gatgtatcagcggccttcctgtcacttcagaggatgaggtctaacactattgaggactac
atgttacgaacgcggcatcagtatcctcacttgcctgaagacaacattaaaaataaggcg
aggatttggagactgtgtgatgagaaggagcaggaacgtagacaggccttttatcgagac
gttcttgcacagcaacaatcactcacactccgcattcaagccatactgagccatcgaaga
aatcaagcgatgcagacgaccgtgaccactgtgaaccagcctgggcagatttga
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integrated database retrieval system
