Xiphias gladius (swordfish): 120802415
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Entry
120802415 CDS
T07311
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120802415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120802415
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120802415
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120802415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
PA
Motif
Other DBs
NCBI-GeneID:
120802415
NCBI-ProteinID:
XP_040006130
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Position
LG17:complement(21938286..22026292)
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AA seq
752 aa
AA seq
DB search
MQYHPLSLCNTSEDEQQESDFIIIVKLEHRVPRCLPLLDKARMALNKGAKAVIFDVSDDA
NAAAELREKDSLHQPVVLVEAADAEELMGLVNKNEEAKVQIEIMVEQSRWPHYDVGILLT
IVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYSSQGCSGSQRHRAAWGS
ASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCPLCMHNIMGEDKH
ISRTERQPQRSRLQQSPEQSQGFLHPQPYSSPHNHPFPQHAIPFSMRPHYPRGPSGPYPS
LGHYSGSSPMDTQTLRFLTSRPLGSGCGYRVPAEGPGRPHRTGANCRTSTHHYTPRRSCH
NYRSSCPTQRSASCSRLHHTTSVTPQTRGAPAHSRQDEGSCSGGSYHTERSGYLADGPAS
DSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGAGPGRGPRRNSL
EAGAQARPRSLDSVVNKGGCPEEQPQTVFSHIHYHRHRHHHYEEGEHNQGPSRGSDEEHG
AAAAAPVSLILDKDSPVCPPKHSPCLCPKPDPTDRPSPGQTECQDLDHSSPTGPPVLMSP
IPLQVQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLQDDRSIHIHYGQGSGFCC
SPPELHPALLPMPLILDSGGMEDWRCCSGAHVVWQKRVQQARSEPQLLGPGTAMDRPPCR
FHRGPAADCNTDICLYCQTLHHNQGSEEESGV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcaccctttgtctctgtgcaacacaagcgaggatgaacaacaagagagtgac
ttcatcatcattgtcaaactggagcacagggtaccccgatgtctgccgctgctcgataag
gctcgcatggcgctgaataaaggagccaaggctgttatctttgatgtcagtgatgatgcc
aatgctgctgctgagctgcgagaaaaggactcccttcaccaaccagtcgtgctggtggag
gccgcagatgctgaggagctgatgggtttggtcaacaagaacgaggaggcaaaagttcaa
attgagatcatggtggagcagtctagatggccacattatgatgtgggtatcctgctcacc
attgtcctggctattctgaccatcgtcttaatctttgctttccgctacaagtgcaagtcc
aacagaacctgggactctgtccatcagcagaccatgcgggccattagtcgattggagacc
aaaacctacagctctcagggctgctcaggctcacagcgccaccgagcagcctgggggtcg
gccagcagctccaattcgagccctgtctgtgctatatgcctggaggagttccaggatggg
cagcatttgaggatcatctcctgcgctcatgagttccataaagactgcgtcgacccttgg
ctgctgcagcaccgcacctgtcccctctgcatgcacaacatcatgggtgaggacaagcat
atttccaggacagagcggcagccccagagaagcagactccagcagagtccagaacaaagc
cagggcttcctgcaccctcagccttatagcagcccacacaaccaccccttccctcagcat
gctatccccttctctatgaggccccactatcctcgtggaccctctggaccatacccctct
ctgggccactacagtggctcttctcccatggacacacaaacactacgtttcctcaccagc
aggccgcttggctccggctgtgggtaccgtgttcctgcagagggtcccggaaggccccac
agaactggagccaactgcaggacgtccactcaccactacacccctcgtcggtcctgccac
aactatcgttcatcctgtccaacccagcgcagtgcatcctgctcaagactgcaccacaca
acctctgtcacaccacagacccgtggagcaccagcccacagccgccaggacgagggcagc
tgctcaggtggcagctatcacacagaacgcagtggatacttggctgacgggccagcgagc
gactccagttcagggccctgccatggctcctccagtgactctgttctcaactgtactgac
gtatccctgcagggggtttatggcagctggtcaaccttccgtagctctctgagtagtgac
tacgatccatttgtgtattacggggcaggtcctgggcggggcccccggagaaacagcctg
gaggctggtgcccaggcccggcccaggtctctggattctgtggtgaacaaaggaggctgc
cctgaagaacagccacagactgtgttcagccacatccactaccatcgccacagacaccat
cactatgaggagggggagcacaaccagggtccaagcagaggctcagacgaggagcacggg
gctgctgctgctgcacccgtttctcttatcctggacaaagattcacccgtgtgccctcct
aagcacagcccctgcctgtgcccaaagccagaccccacagatcggcccagcccgggacag
acagagtgtcaggaccttgaccacagcagtcctacaggacctcctgtcctgatgtcccca
atccccctacaggtccaaccccactgctgccaccagggacacggacaccctcccgctcct
cttgggcgagtgggtggctgtgtgcttgatggaccctctgttcgcttccaccagagcctg
gatctgcaggatgaccgtagcatccacattcactacggccagggctcgggcttctgctgc
tctccccctgagctgcaccctgctttgcttcccatgcccctcattctggactctggaggg
atggaggactggcgttgttgttctggggcccatgttgtgtggcaaaaacgggtgcagcag
gctcgctcagagcctcagctcctgggacctgggactgctatggacaggccaccttgcagg
ttccaccgcgggcctgctgctgactgcaacacagacatttgtttatactgccaaacatta
caccacaatcagggatcagaagaggagtctggtgtgtga
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