Xiphias gladius (swordfish): 120802442
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Entry
120802442 CDS
T07311
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04142
Lysosome
xgl04144
Endocytosis
xgl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120802442 (cltca)
04142 Lysosome
120802442 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120802442 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120802442 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120802442 (cltca)
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120802442 (cltca)
Exosome [BR:
xgl04147
]
Exosomal proteins
Proteins found in most exosomes
120802442 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
120802442
NCBI-ProteinID:
XP_040006204
LinkDB
All DBs
Position
LG17
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLSWFLQ
ENKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESL
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQTYGYGYQAPAGYAQPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacttagggatc
aatccagccaacataggcttcagcaccctcaccatggagtcagacaagttcatctgtgtc
cgggagaaggtgggcgagcagactcaggtggtgatcattgacatggccgaccccaatacg
cctatccgcaggccaatctcagccgacagcgccataatgaatccagccagcaaggtcatt
gcactcaaagacgccgccaaaacccttcagatcttcaacattgagatgaagagcaagatg
aaggcacacaccatgacggacgatgttaccttctggaagtggatctcccttaacacagtt
gcacttgtgactgacaatgccgtctaccactggagcatggagggtgactcacagcctgtg
aaagtctttgaccgccactccagcctggcaggctgccagatcatcaactaccgcactgac
gccaagcagaaatggctcctgctcatcggtatctcagcccagcaaaatagggtggtgggg
gccatgcagctctactctgttgacagaaaagtttctcagcccatcgaaggccatgctgcc
agctttgcccagttcaagatggagggaaatacagaggagtcgactttgttctgcttcgct
gtcagaggccaagctggaggaaagttgcacatcatcgaagtggggacgccaccaactggc
aaccagccatttccaaagaaagcagtggatgtgttcttccctccagaagcccagaatgac
ttccctgtggccatgcagataagctccaagcaagatgtggttttccttattaccaaatat
ggctacatccacttgtatgacctggagacaggcacctgcatctacatgaaccgcatcagc
ggagagaccatctttgttaccgctccacatgaggccacctcaggcatcattggcgtcaac
aggaagggacaggtgctgtctgtatgtgtggaagaggaaaacatcatcccgtacattacc
aacgtactgcagaatccagatctggctctccgcttagctgtccgcaacaacctcgccggc
gctgaagagctcttcgcacgcaagttcaacaacctgtttgctgctggcaactactctgag
gctgccaaagtggctgccaatgcaccaaagggtatcctacgtaccccagacaccatccgt
cgcttccagagcgttccgactcagccaggccagacctcccccttactgcagtactttggt
atcctgttggaccagggccagctcaacaagtttgagtccttggagctttgcaggcccgtc
ctccagcagggacgaaagcagcttctggagaagtggctgaaggaagacaagttggagtgt
tccgaggaacttggtgacctggtgaaggcagtggatcctaccttggctctcagtgtctac
ctgagggccaacgtccccaacaaggtcattcagtgctttgcagagactggtcagttcccc
aagattgtcctgtatgccaagaaggtgggctacactccagactggatctttctgttgagg
aatgtgatgcgaatcaacccagaacaaggcctgcagtttgcacagatgctggtccaggat
gaagagccactagctgacatcacacagattgtggatgtgttcatggagtacaacctgatc
cagcagtgcacctccttccttctggacgctttgaagaacaacagaccctcagaaggacca
ctgcagactcgcttgctggagatgaacctcatgcatgctccacaggttgctgatgctatc
ctgggcaaccaaatgttcaccaactatgatcgtgcccacattgcccagttgtgtgagaag
gctggactcctgcaaagggcactggagcattacaccgacctgtatgacatcaagcgggct
gtggtgcatacacacctgctcaacccagagtggctcgtgaacttctttggctcgctgtca
gtggaagactctttggagtgcctcagggccatgttgtcggcaaacatccgccagaacctg
cagatatgtgtccaggtggcttccaagtaccatgagcagctcaccacacaggctctcact
gagctctttgagtccttcaagagctttgaaggtctgttctacttcctgggctctattgtg
aacttcagtcaggaccctgaagttcacttcaaatacatccaagctgcttgcaaaacgggc
cagatcaaagaggtggagaggatctgtagagagagcaactgctacgaccctgagcgtgtc
aagaacttccttaaggaagccaaactcaccgaccagctgccgctcatcatcgtctgtgac
cgttttgactttgtccatgacctggtcctctacctgtaccgcaacaacctgcagaagtac
attgagatctatgttcagaaggtgaatcctagccgtctgcctgttgtggttggcggcctc
ttagacgtggactgctcagaggatgtcatcaagagcctaatcttggttgtcaggggacag
ttctccactgatgaactggtcgctgaggtggaaaagaggaacagactgaagctgctgctg
ccatggctggagtctcgcatccatgaaggctgcgaggagcccgcaacccataatgccctg
gccaagatctacatcgacagcaacaacaaccctgaacgcttcctgcgagaaaacccgtac
tatgacagccgcgtggtgggaaagtactgcgagaaaagagacccccatctggcctgtgtg
gcctatgagagaggacagtgtgaccaggagctgatcaatgtctgcaatgagaactccctg
ttcaagagcctgtctcgctacctggtccgtcgcaaagaccctgagctgtgggctagtgtg
ctgctggagagcaatccctacagacgacagctgattgaccaggtggtgcaaacagcactc
tcagaaacccaggacccagaggaggtttcagtcacagtcaaggccttcatgactgcagat
ttgcccaacgagctcattgagcttctagagaagattgtattggacaactctgtcttcagt
gaacacagaaatctgcagaatctgctgatcctgacagcgatcaaagctgaccgtactcgt
gtgatggagtacatcagcaggctagacaactatgacgctcctgatattgctaacatcgcc
atcagcaatgagctctttgaggaggcctttgccatctttaggaagtttgacgtcaacacc
tctgctgtgcaggtgctgattgagcatattggcaacctggaccgggcctatgagtttgca
gaacgctgcaatgagccagctgtgtggagccagctggctaaggctcagctacagaagggc
ctggttaaggaggccattgactcctacatcaaagctgatgacccctctgcatacatggag
gtggtacaggctgctgataagagtggtaactgggaggacttggtcaaatttcttcagatg
gctcgtaagaaggcccgtgagtcctatgtagaaacagagctcatctttgccttagccaaa
accaatcgcctggcagaattggaagagttcattaatggacccaacaatgctcacatccag
caggtcggtgatcgctgctatgatgagaaaatgtatgaggccgcgaagctgctttacaac
aacgtctccaactttggtcgtctggcttcaactctggtgcacctcggggagtaccaggct
gctgtggacggcgcccgcaaggccaacagcacccgcacctggaaagaggtgtgcttcgcc
tgcgtggatggaaaagagttcagactggcccagatgtgtggtctccacattgtggtgcac
gctgatgaactggaggaactgatcaactactaccaagaccgtggttactttgaggagctg
atcaccatgctggaggccgccctgggcctggagcgtgctcacatggggatgttcacggag
cttgccatcctttactccaagttcaagccccagaagatgagggagcacctggagctcttc
tggtccagagttaacatcccaaaggtcctgagagcagcggagcaggctcacctgtgggca
gagctggtcttcctgtacgacaagtacgaggagtacgacaacgccatcatcaccatgatg
aaccacccgacagacgcttggaaagagggacagttcaaagacatcatcaccaaggtggcc
aacgtggagctctactacaaagccatccagttctatttggagtttaagcccttgttactg
aatgatttgctcatagtgctttcccccagactggaccactcccgtgctgtcaacttcttc
agcaaggtgaaacagctgcctctggtaaaaccctacctgcggtcagtacagaaccacaac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaagactatcaggca
ctgaggacatcaatagatgcctatgacaacttcgacaacatctcgctggcccaacgcttg
gagaaacatgagctgattgagttcaggagaatcgctgcctacctcttcaagggcaacaac
cgctggaaacagagtgtggaactctgcaagaaggataagctctataaggatgccatgcag
tatgcgtcagagtccaaggacacagagctggcagaggagctgctgtcctggttcttacag
gagaacaagaaggagtgtttcgctgcctgcctgttcacctgctatgacctgctgcggcct
gacgtggtgcttgagactgcctggaggcacaacatcatggacttttctatgccgtacttc
attcaggtcatgagggagtacctcagcaaggtagataaactagaaacttcagagtcccta
aggaaagaggaggagcaggcaacagagacgcaacctattgtctatggcacaccccagctg
atgctgacagccggccccagcgtacctgtggcccctcagcaaacttatggctacggctac
caggcgcctgcaggatatgctcagccagcagctcagccaggctttggctacggcatgtaa
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integrated database retrieval system
