Xiphias gladius (swordfish): 120802458
Help
Entry
120802458 CDS
T07311
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120802458 (capns1a)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C2: calpain family
120802458 (capns1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
120802458
NCBI-ProteinID:
XP_040006237
LinkDB
All DBs
Position
LG17:complement(24741255..24747415)
Genome browser
AA seq
216 aa
AA seq
DB search
MFFAKKFISGIIDVVSNIDPAQFVPSDPPPPRRPVAYAEQHESDEEKQFRRVFQQLAGDD
LEVSPTELMNILNRIITKHGDLKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIK
KWQGLYKSYDTDGSGVIGADELPNAFRAAGFPLNDQLFEMIIRRYSDESGNMDFDNYIGC
LVRLDAMCRAFKTLDKDNNGTIKVNIQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgccaaaaaatttatcagtggcatcattgatgttgtaagcaacattgacccc
gcccagtttgtgccatctgaccctcctccaccccgtaggccagttgcatatgcagagcag
catgagagtgatgaggagaaacagttccgcagagtcttccagcaactcgctggagatgac
ttggaagtaagcccaactgagctgatgaacatccttaatagaatcatcacaaagcatggt
gatctgaagacagatggtttcagcattgagtcttgcaggagcatggtggcagtcatggat
agtgacagcactggaaaactcggctttcatgaattcaaacacctctggaacaatataaag
aaatggcagggattgtacaagtcctatgacacagatggctctggtgtcattggtgcagat
gagctgcccaacgctttcagagctgctggcttccctctcaatgaccagctgttcgagatg
atcattcgcagatacagcgatgaaagtgggaacatggattttgataactacattggctgc
cttgtgaggctggatgccatgtgccgtgccttcaaaactctggataaggataacaatggg
actatcaaagtcaatattcaggagtggcttcagttgaccatgtactcttga
DBGET
integrated database retrieval system
