Xiphias gladius (swordfish): 120802477
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Entry
120802477 CDS
T07311
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120802477 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120802477 (nup98)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120802477 (nup98)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120802477 (nup98)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120802477 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
120802477
NCBI-ProteinID:
XP_040006274
LinkDB
All DBs
Position
LG17:938996..977594
Genome browser
AA seq
1844 aa
AA seq
DB search
MFNKTFGTPFGGGTGGFGNSSTFGQQNTGFGTTGGFGTSAFGTASNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGNSGTGTSGGLFSQQNNAFGANKPTSFG
SFGTSTSSGGLFGSTNTASNPFGGTNSLFGGSGFSAAQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNQMAAATGGLFGSATATSSATT
GLFGSTAPNTSFSFGQNKSTFGATAAGGFGTTAGGLFSQQPQQQAGSLFKPFGQTTTTQN
TGFSFGNTNTMGQANTSTMGLFGNTAASQSGGLFGAAQTSTATGFGTGTGLFGQTNTGFG
NVGTQPSLFGNKTTGFGTTTTSAPSFGTGTGLFGNKPALTLGTGTNTSTFGFGANPAGGS
LFGNKPATGGLGAGLGTSFGTAVGTGQTSLFGSNQNKLGTTLGTMGTFGGTGFNSGTGTL
GFGAAQQPVALTDPNTAAAQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTN
PTAQKALTTPTHYKLTPRPATRVRPKALTSSASSKSQLFDGLDDDEPSLTNGAFIPRKSI
KKLVLKNLNSSQYSSQTETDDLASPSEYPQNGHSLVEEEVVLRELAGPSSRVDDDPEVTQ
FYVNPIAKPIPQGRTQTSLQDTIGDLNMHKPARNSLELSSDDVSASLGEESLQEEREEEQ
QETRQSPHPAGIVLNRVGYYTIPSMEDLAEMVDENGECVVENFTVGRKGYGSIFFPGEVN
VTGLNLDEIVHFRRKEVIVYPDDKNKPPEGDGLNRRAEVTLDGVWPNDKTTCTQIRSPER
LTDMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEDVPPQADPKK
LKTMMSLPPSRLQQQLPPSQQQVAPQAQSTDVVDLPGGVAELDSDMADITQSLPTESMLG
GEEGDPLGGEMDTTGGKLGLISAEHDSISASSHIASTLGINPHTLQIMKASLFSEDEEGS
DMFQDQGAMKVSTDISSPRLVLPGAQSRPSVGGLLQARFTSGLFSQLSDSPRLTHPPPFL
SRASPAIVETPRSLHWAGPAPSSFLLPPRTPEPSVRTVGVRRLGGPVPLKESVTLGKGGL
LMDAGLFAGRSFRVGWGPGWTLAHCGHRLSSLPSKQLDHQDLTAKTDFSFLPKPARSKPL
IESPYKVVLEQMVGLEPPALKTSDEEEEDEESQVVLQRPLEICLEHSTISTTDASACPLV
RPEPGVAALHKYAKWITELNDKQGEADPLLGYWAEVWTLCEALWGRLGPADQEPDIEMPS
DYEQQLERRRTFSAWLSHGATCRVEEEVTLAGKGRHTEAIFSYLTGNRISEACRLAQKEG
DHRLSLLLSQAMGSQYCRDLLALQLADWNRMQTDCYLPEERLRIFTLLAGKPVWQSSDSV
VNVCSQLDWKRCVAVHLWFMLPPTASVADALAKYEAAFQGTCEGGKYACAPLPPYLEAEE
PDMDDEEEEDEESSPSSKRPLYDLCFHLLKLYSDRHYSLQQLLDPLTITWERLDYRVSWH
LWGVLQALHYSHLSASRQGLLHASYAAQLESAGLWHMAIFILLHIPDHAQRERAVREMLT
LHCPLQETDDSVQRERFLIERLLIPEQWIHEAKATRARREADRHQEALHLYRAGYWSQCH
RLLIQHLASDCIINDNHDYLLEFLEGLAVPEHSSTIQDWDTAGRVYLDYIRVIKTLQDIQ
QMENAGYELERLYTDVTSLCSRIELLPCSTARDRLAQSEMAKRVANILRVVLSLQQGDAA
SDSLSIPLAQLAPHITRLPMPEDYTLEELRGLTQSYLRQLIVSQ
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagacatttggtactcccttcggtggagggacaggtggatttggcaactca
tcgacctttggacagcaaaacacaggttttgggacgacgggaggctttgggacgtctgca
tttgggacagccagcaacacaggagggctgtttggttccacacagaataaacctggtggt
ctgtttgggtccagtacattcagccagccagcgacttcctccaccagcaccggcttcggt
tttggtgcagcgagcggcacgtccaccagcttgtttggcaactccggaacaggcaccagc
ggcggactcttctcgcagcagaacaatgcctttggtgccaacaaacccacatcttttgga
agctttgggacgagcacgagcagcggcgggctgttcgggtcaaccaacaccgcctccaac
cctttcggtggaacaaactccctgtttggaggctcgggtttctccgcagcacagcagcca
gggacaactgtaaaattcaaccctccaacaggaagtgacaccatggtgaaagctggtgtg
accacaagcatcaacaccaagcaccagtgcatcacagccatgaaggagtacgagaacaaa
tccctggaggagttgagactggaggactaccaggcgggcaggaagggccccaccaaccag
atggctgcagcgacgggcggtctgtttggttcagccacagccacatccagcgccactact
ggcctgtttggctccacagcccccaacaccagcttctcctttggacagaacaagagcacc
tttggagcaacagcggccggcggtttcggtaccaccgcaggcgggctgttcagtcagcag
ccccagcaacaagccggaagcctcttcaagccatttggtcagaccaccaccacacagaac
accggcttctcctttggcaacaccaacactatgggacaggccaacaccagcaccatgggt
ttgtttgggaacacggcagcgtctcagtcaggcgggttgttcggcgcggctcagaccagc
actgccactggctttgggacgggcaccgggctgttcggccaaactaacacagggtttgga
aatgttggcacacagccgagtttattcggtaataagacgaccgggttcggcaccaccacc
accagtgctccgtccttcggcaccggcactgggctctttggcaacaagcccgccctcaca
ctgggaactggaaccaacacctccaccttcggttttggtgcaaaccctgctggaggaagt
ctgtttggaaacaagccggccactggaggactgggggccggactgggaaccagctttgga
acagcagtgggcaccgggcagacgtctctctttgggagtaaccagaacaaactgggcacc
acgctaggaacgatgggaacattcggaggaactggattcaacagtggaaccggcaccctg
ggcttcggagctgcacaacaacccgtcgcactcactgatccgaacacagcagccgcgcag
caggccatgcttcagcagcagctcagcgttttggcatattcaccgtacggagactcaccg
ctgttcagaaatccgctgtccgaccccaagaagaaagaggagcgcctgaaaccaaccaat
ccgacggcccagaaggctctgaccacgcccacccactacaagctgacccctcgacctgca
accagggtccgccccaaggctctgacttcatccgcctcctccaaatcgcagctcttcgac
ggcctggatgatgacgagccctcactcaccaatggagccttcattcccaggaagagtatc
aagaaacttgtgctgaagaacctgaacagcagtcagtacagcagtcagacggagaccgac
gacctcgcttcaccatcagagtatccacagaacggacacagccttgtggaggaggaggtg
gtgctgagggagctggcaggccccagcagccgtgtagacgacgaccctgaggtcacccag
ttctacgtcaaccccatcgccaagccgatcccgcagggccgcacccagaccagcctgcag
gacaccatcggtgacctaaacatgcacaaaccagcgaggaacagcctggagctgagcagt
gatgacgtgtcggcatctctgggggaggagtctctgcaggaggagagggaggaggagcag
caggagacccgacagtctcctcacccagcgggcatcgtcctgaaccgtgttggttattac
accatcccctcgatggaggatctggctgagatggtggacgaaaacggagagtgtgtggtg
gaaaacttcaccgttggcaggaaaggctacggctccatcttcttccctggtgaggtgaat
gttacggggctgaacctcgacgagattgtccacttcagacgcaaggaggtcatcgtgtac
ccggacgacaagaacaagccaccagagggggatggtcttaacagacgggcagaggtgact
ctggacggcgtttggccaaacgacaagacgacctgcactcagatcaggagccccgagcgt
ctgaccgacatgaactacgagggtcggctggagaaggcctcacgcaagcagggagcccgt
ttcctggagtacagacctgagacaggatcctgggtgttcgaggtggcccatttctccaaa
tacggccttcaggactctgacgaggaggaggacgtcccgcctcaagccgaccccaagaag
ctgaagacgatgatgtcacttcctccctccaggctgcagcagcaacttcccccctcccag
cagcaggtggcgccacaggctcagtccactgacgtcgtggatcttcccggtggtgtggca
gagttggacagtgacatggccgatatcacccagagcctcccgacagagagcatgctggga
ggagaggagggcgacccgctcgggggggagatggacacaacgggtgggaagcttggattg
atctctgcagagcacgacagcatctctgcatccagccacatagcatcaacgctggggatc
aacccgcacaccctccagatcatgaaggcgtctctgttttcggaggatgaagaggggagc
gacatgtttcaggatcagggagcgatgaaggtctccaccgacatctcgtcccctcgcctc
gtcctgccgggagctcagagtcgaccctccgtgggtggtctccttcaggctcgttttacc
tccggcctcttctctcagctctcagactctccccgccttactcatcctcctccttttctg
tctcgggcgtctccggcgatcgtcgaaaccccccggtcattacactgggcgggaccggcc
ccctcctccttcctgctgccccctcgaactccagagccttcggtcaggacggttggcgtc
cggcggctgggtggccccgtccccctcaaagagtcggtcactctggggaagggaggtttg
ttgatggacgctgggctgtttgcgggtcggtcctttcgggttgggtggggtcccggctgg
acgctggcacactgcggccaccggctgagttcactaccctccaaacagctcgaccaccaa
gacctgacggccaagaccgacttcagcttcctgccaaaacctgcaaggagtaaaccactg
atagaaagcccctataaggtggtgttggagcagatggtgggtctggagcctccagcactg
aagaccagtgatgaggaggaggaggatgaagagagccaggtggtgctgcagcgcccccta
gagatctgcctggagcacagcaccatcagcaccacagacgcctcagcctgccctctggtc
cgtccggagcccggtgtggcggcgctgcacaaatacgccaagtggatcacagagctgaac
gacaagcagggtgaagcagaccccctccttgggtactgggccgaggtctggaccctgtgt
gaggccctgtggggtcgcctgggccccgcggaccaggagccagacatcgagatgcccagt
gactacgagcagcagctcgagagaaggcggaccttctcggcctggctctcccacggcgcc
acctgcagggtggaggaggaagtgactctggcagggaagggtcgccacacggaagccatc
ttcagctacctgacgggcaaccgcatcagtgaggcgtgtcgactagcacagaaggaagga
gaccaccgtctgtccctgctgctgtctcaggccatgggctctcagtactgccgggacctg
ctggcccttcagctcgccgactggaaccgcatgcagacggactgctacctgccggaggaa
cgactgcgcatcttcacgctactcgcagggaaacctgtgtggcagtcctctgactctgtg
gtgaacgtgtgctctcagttggactggaaacgctgtgtggctgtccacctctggttcatg
ttgcctccgaccgcctcggtggccgacgccctcgccaaatatgaagcggccttccagggc
acatgtgaaggggggaagtacgcctgtgcccccctgcctccgtacctggaggcggaggag
ccagacatggacgatgaggaggaggaggacgaggagtcgtcgccgtcgtctaaacggcca
ctgtacgacctgtgcttccacctgctcaaactctacagtgacagacactacagcctgcag
cagctgttggaccctctgacgatcacctgggagcgtctggattaccgtgtgagctggcac
ctgtggggcgtcctgcaggcgctgcactacagccacctgagcgcctcgcggcaggggctc
ctccacgccagctacgccgctcagctggagagcgccggtctctggcacatggccatcttc
atcctgctccacatccccgaccacgctcagcgggagcgggcggtaagggagatgttgacc
ctccactgccccctgcaggagacagacgactcggtccagagggagcgcttcctgatcgag
aggctgctgatcccggagcagtggatccacgaggctaaggccacccgagcccgccgagaa
gccgacagacaccaggaggccctgcacctgtaccgggccggatactggagccagtgtcac
cggctgctgatccagcatctggcctcagactgcatcatcaacgacaaccacgactacctg
ctggagttcctggaggggctggcggtcccggaacacagcagcaccatccaggactgggac
actgcagggagggtttacctggactacatccgggtcataaagactctgcaggacatccag
cagatggaaaacgccggttacgagttggagcgtctctacaccgacgtgacgtctctctgc
agcaggatcgaacttctgccctgcagcaccgccagagaccgcctcgcccaatcagaaatg
gcaaagcgcgttgccaacatcctgcgcgtggtgctgagcctgcagcagggcgatgcggcg
tccgactccctcagcatcccactcgcccagctggcaccgcacatcacccgcctgccgatg
ccggaggactacacgctggaggagctgcgaggcctcacgcagtcgtacctgcgacagctc
atcgtcagccaatga
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