Xiphias gladius (swordfish): 120802633
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Entry
120802633 CDS
T07311
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120802633 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xgl04091
]
120802633 (frem2a)
Lectins [BR:
xgl04091
]
C-Type lectins
Lecticans
120802633 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
120802633
NCBI-ProteinID:
XP_040006589
LinkDB
All DBs
Position
LG17:complement(7577779..7634028)
Genome browser
AA seq
3134 aa
AA seq
DB search
MVWITSVAKMLLYRLLLCFSAAGIGFAQPDSSGLFYALRSELSEDAILVANNGIRVPFGR
SVFVDPINDLVIQTQPGDRCSITVLDNDPLAQRPGHLSPKKFPCDFGPNDVTYSHYGSRS
PARDRVRLQLRYDAQTETVIIPFMMEVEVVFTQLELLTKNMPLTVDNLKGTSNPIDKKTL
EFTYDRDSHKCEVASLSSGSALPRYGRLIDGGKLSKMMDCDEFTQTDIRYEHTSDRKSPN
RDYVPMVVELHDKEGNLVKQEYFHLMIRIKEGEENTPPKPSFVSMMMMEVSQFVMTALTP
DMLAAEDAESDPDELIFNITSPLSYEEGYIVSTDDRNLPITSFYQRDLRDLKIAYKPPSL
DSDTERIFQLEFEVVDTDGAVSDPFAFMIVVKPMNSLAPVVTRNTGQLLYEGQSRPLFSD
HNLEISDEDNLDAVTITVVDGLRHGDLMVLGSHRKFFTPADLTTGAVVYQHDGSDTYSDN
IVYKMTDGKNEVEFLFPITIVPTDDEPPIINANTGLVLFKNQMMPISPLMLSAADIDSED
STIKFTIVPPFSTIGTVLLRQSDAPEDPSSWKFNGEDEVYEKEVTEWLQKDITDGKLFYK
HTGPHNTDTIMDQFVFTVQDDNDPPNESGESAFIIRVLPIDDVPPELFPGTTLQMTVQEY
KLTHFSKEVLRYTDLDSEDRDLKYIVIQPPTDTDENNPVVFGSLVLTDSPDTEVTEFTQA
QVNHHKISFGPPNVELGITAHVVQFRYTVEDTAGNSVEGAFTIYLQPVNNKPPQITNTGF
TVFERGMHIITIAELDATDLDTESQQITFTLSQPPKHGQVQAAFTDLEKKGVFRLEDISE
GKISYIHGGEETLSDEFQLDVSDGFHVVTVTVKVNVKPVDDETPTVSLPEGTIGSHMDVL
ENGATEITTNVIQGHDDDTDDLQLTFIVEDPPVMGEILVKGVPATRFTQADIINGVVVYA
HIGGEIGLTSQQDGFNLTLTDMSDDWTVGGNKVNGVHVRVTILPVDSQAPEVGVGIQFSV
IEGEKYAIGPQHLDADDNDTPTDEILCTIIVQPTAGYVENISPAPGSEKSRSGTAITAFT
IRDIKEGNIYYVQSIHKGVEPLEDRFTFRCSDGINFSENHFFPIVIIPANDEKPEIYLRE
IVVMEGMNIIIDTPILNGADADIPPEELMFIISKPPKHGAILNQLPTGSVLVTNFTLEQI
REASSIIYEHDDSETTEDSFDVILSDGKYSVQKTAMVMIVAVDDETPRMLINDGLEVEIG
ETKEINNKVLKATDLDSDDSTLTYIIRFGPSQGLLQRKTPYGSLENITLGMNFTQAELDE
GLIVYTHNGQEGIRDLVKFDVTDGMNPLIDRYFYITVGSIDMVFPDVVSKGVSLREGGRV
TLTTDLLSTTDLNSPDENLVFTVTRAPIRGHLECTDTPGMPIVSFTQMQLAGSKIYYIHT
SDDEVKMDSFEFEVTDGYNPIFRTFRISIVDVDNKKPVVTVNSLVVTEGQIKLITPFELT
AEDQDTAEKLLKFTVTQLPVHGKLLYNQSTHVTSFTKQDLNENLISYKHDGTESSEDSFS
FTVTDGTHTDFYVFPDTVFETRHPQTMKITIVAIDNGIPQIVLNKGAPTLKILATGHLGF
PISSKVLRAEDRDSSPASLVFHITTQPKHGYIINLGHGNNSINTFSQADIDDLNICYVLR
NEENATSDLFHFSVEDNGGNKLKGQQFRLDWAWMSLEKEYYVVDEEDKFLEVVLRRRGYL
GETSFIGIGTQDGSAKKEEDFKGKSQRQVQFNPGQTRATWRVRILTDGKYEQAESFQILL
SEPVMGVMEFPATATVEILDPSDESTVFFPEQIHSVEEDVGELFIPVHRSGDISQELMVV
CYTQQGSASGTIPTTVLSYSDYISRPEEHGSVLRFDKGEREKQCRVVIIDDSLYEEEESF
NVTLSLPVGGRLGVHYPTTKVNILEDMDDAPVFYFGELEYHVDESDGHVEVKVWRTGTDL
SKTGTVTVRSRKAEPVSAEAGIDYVGISHNLDFAPGVSMQTFKVTILDDLGQPQLEGTES
FELVLRMPVHGILGEPAKATVFINDSVSDLPKVQFREPVYTGEESDGQIAVTVYRSGDVS
HKSTVRCYTRQGSAQVASDFDERPNTDASIIAFLPGEAEKLCILSLVDDTLYEEGEELRL
ILGNPKSNSQFGASVGALNETLVKIKDTADKPIIRFLETKFSVSEPKEAGAMATVRIPVV
RVGDTSKVSVVRVHTKDGSAVSGEDYYPVSQDIEFKQGDKEHVVEVEVLFDGVREMREAF
TLHLKPDENMVAETQVTKAIVYIEETNSMADVTFPSLPHVVSLFHYDNVARTPDNLHPPA
GYPVICVTACNTRYPDYDKTGSICVSEQINNTLTRYRWLISAPAGPDGVTSPMREVDFDT
FFTSSKMITLDSVYFQAGSRVQCAARAVNSNGDEGLELSSPIVTISQEEGMCQPRKMGTV
GAEPFSAKLRYTGADDLKHPNLIKVTVTMPHIDGMLPVISTRPLMNFDLTLSPDGTRVGN
HRCSNLLDYNEVTTGHGFITASTRSPESMGDSVPYQFSGSLRGNSTLRFYRNLNLEACLW
EFTSYYHMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGTGGWQHFDLQ
SELRLTFVYDTAILWKDGIGSPPQAELQGALYPTSMRINDQGRLVVNFRTKARFRGLFVE
SHSGGRIKRAGTSKSSMVMSVDHPGLTFNLTLMRSEPTYNQPVQQWIFTSDFAVRDYSGT
YTLKLIPCTTAQNMEYTVPPVCSPREPVTFDLDIRFQQVSDPVAVEFSLNTQMFLLSKRS
LWLSDGSMGFGQESDVAFSEGDTIYGRVMVDPVQNLGDSFFCNIEKVFLCTGADGYVPKY
NPTKFEFGCLADSPSLLYRFKIVDKAQPETQARVFGDISFNAVLAVDDPSAMSLVRQPGS
DGFRLDSTAMFQVAAGREWYIHTIYTVRSKENANRGIGKRSLEYHSLAATSNDLTLTPSS
GKGHRSRRSAGNEVPELAEDIGAGNNRGTNIMHIALDRTKRQEGGSNEVFAQGLESSELS
AEEEEEGLVTVVGALVGLLLTVLIIVTTVLVLKSRQKDVKEGWREGVQEVVKGSVSTEPM
LVVRMQDCHNSSEV
NT seq
9405 nt
NT seq
+upstream
nt +downstream
nt
atggtttggatcacatccgttgccaagatgttgctctatagacttctcctgtgtttttca
gcagcgggaattggtttcgcacagcccgacagctctggattattttacgcactgagatcc
gaattgtcagaggatgcgatcttagtggccaacaacggaatacgcgtgcctttcgggagg
tcggtcttcgtcgatcccattaacgatctggtcattcaaactcagccgggggatcgatgc
agcatcaccgtcctggataacgacccgctcgcacagagaccggggcatctctctcccaag
aagtttccgtgtgatttcggtcccaatgatgtgacgtactcccactatgggtcccggagc
ccagctagagacagagtgaggttgcagctcaggtacgacgcgcaaaccgaaaccgttatc
atcccgtttatgatggaggtggaagtagtttttacgcagctagagctactcaccaaaaac
atgcctctcactgttgataatctcaaggggaccagtaatcccatcgataagaagacttta
gagtttacctacgatagagactctcacaaatgcgaggtggcatccctgtctagcggcagc
gctctgccgagatatggaagactcatcgacgggggtaaactttccaaaatgatggactgt
gacgaattcactcaaactgacatccgctatgagcacacgtctgaccgcaagtctcccaac
agggattatgttcccatggttgtggagctgcatgacaaggaaggcaacctagtgaaacag
gagtatttccatctcatgattcgcatcaaggagggagaagaaaacaccccccccaaaccc
agctttgtgtccatgatgatgatggaggtcagccagtttgtcatgactgccctcacccct
gatatgctcgctgcagaagatgcagagtcggacccagatgagcttattttcaacatcacc
tctcccttatcttatgaggagggctacattgtcagcactgatgacagaaacctccccatc
acatccttctaccagagagacttgcgtgatctgaaaatagcttacaagcccccttccctg
gactcagacactgagaggatttttcagctcgagttcgaggtggtagacacagacggggcc
gtctcagacccctttgcgtttatgatcgttgtgaagccgatgaattctttggcccctgtt
gtgacacgtaacacgggtcagctgctgtacgaggggcagtctcggcctctcttcagcgac
cacaacttggagatcagcgatgaagacaacctcgacgctgtcaccatcacggtggtggat
gggctgcgccacggagacctcatggtgctgggctctcacaggaaattcttcacacctgct
gacctcacgacaggagctgttgtgtaccagcacgatgggagtgacacatacagcgacaac
attgtctacaagatgacggacgggaaaaacgaagtagaattccttttccccattacaatc
gttcccactgatgacgagccaccaattataaatgccaacactggcctggtgctattcaaa
aaccagatgatgcctatatctcccctcatgctcagtgctgccgatattgactccgaggac
tcaactattaaattcactattgtccctcccttttctacaattggcacagtgctcctaagg
cagtcagacgcccctgaggatccctcctcttggaagttcaacggtgaagatgaagtatat
gagaaggaggtgacagagtggcttcagaaagatatcactgatggaaagttgttttacaag
cacacaggccctcacaacacagataccatcatggatcagtttgtgttcacagttcaggat
gacaatgaccccccaaatgagtcaggagagagtgcatttataattcgggttttgcctatc
gatgatgtaccccctgagctgttccccggcaccaccctgcagatgacagttcaggagtac
aagctcactcactttagcaaagaagttttgcgctacaccgatttggactctgaggaccgt
gacctcaaatacatagttatccagcccccgacagatacagatgaaaataacccggttgtg
ttcggttctttggtgctgacagacagcccggacactgaggtcacagagttcacacaagct
caagttaaccatcataagatatccttcggccccccgaatgttgagcttggaatcacagcc
cacgttgtgcagtttcgttacactgttgaagacacagctgggaacagtgtagaaggggct
ttcactatctacctccagcccgtcaacaataaaccccctcagattacaaacactggcttt
actgtgtttgaacgcggcatgcacatcatcaccattgctgagctagacgccacagacctt
gacacagagagtcaacagattacatttactctaagccagccccctaaacatggccaggtc
caggctgcattcactgacctagagaaaaagggggttttcagacttgaggatatctcagag
gggaagatatcatatattcatggtggggaggagacgctgagtgatgaatttcagctggat
gtgagcgatgggttccatgttgtaaccgtgacggtcaaagttaatgtaaagcctgtcgat
gatgaaacgccaactgtcagcctacctgagggaacaattgggtctcatatggatgtgctg
gaaaacggagccacagaaatcacaactaatgtcattcaaggccatgatgatgacacagat
gacctccagctgacctttattgtggaggatcctccagttatgggtgaaatactggttaaa
ggagtgcctgctactaggtttacacaggctgatattatcaatggtgtagttgtgtacgca
cacatcggtggcgagataggtctgacctctcagcaggatggcttcaatttgactcttaca
gacatgtccgatgattggacagtaggtggcaataaggtcaacggagtccatgtacgagta
actatccttcctgttgacagccaggcccccgaggttggtgttgggattcaattcagtgtc
attgaaggggagaaatacgccatcggccctcagcacttggatgctgatgataatgacact
ccaacagatgaaatcctttgcaccatcatcgtccagcccactgctggctatgtggaaaat
atatcgcctgccccaggctcagaaaagtccaggtcaggaacagctatcactgcttttacc
atcagagacataaaggaagggaatatctactatgtgcagagcattcacaaaggggtagag
ccattggaggacaggttcacatttaggtgctctgatggcatcaatttctcagagaaccat
ttcttcccaatagttatcatccctgcaaatgatgaaaagccagagatttatttgagggaa
atagtcgtgatggaggggatgaacatcatcattgacaccccgattctgaatggggctgat
gccgatattccacctgaggagctgatgttcatcatttccaaaccccccaaacacggtgcc
attttaaaccagctacccacaggctcagttctggtgactaatttcactttagagcagatc
agggaggcatcaagtattatttatgagcatgatgactcagagacaacagaagacagcttt
gatgtaattctgtcggatggaaaatactctgtgcagaaaacagccatggttatgatcgtt
gctgttgatgacgagacaccccgaatgcttatcaacgatggtctggaggtggaaattggc
gaaaccaaagagatcaacaacaaagtgctcaaagcgacagatctagattcagatgacagt
acgctcacatatatcattcggtttgggcctagtcagggtctcctgcagaggaaaactcca
tacgggtctctggagaacatcaccctcggcatgaatttcacacaagctgaactcgacgaa
gggcttatagtttacacacacaacggacaggaaggcatccgagacttggtcaaatttgat
gtcacagatggaatgaacccactaattgatcgctacttctacatcactgtgggcagcatc
gacatggtcttccccgatgtcgtcagtaaaggcgtgtctctgagggaaggtggcagagtg
actttgaccacagatcttctcagcactaccgacctcaacagccctgatgagaacttggtc
tttactgtcacaagggctcccatcaggggccacttggagtgtacagatacccctgggatg
cccattgtgtcttttactcaaatgcaactggctggcagtaagatttactacatccatacc
tctgatgatgaggtgaaaatggacagttttgagtttgaagtcactgatggctacaatcct
atattcagaacattcagaatctctattgtggatgttgacaataagaaacctgttgtgact
gtaaatagtctcgtcgtcacagaagggcagattaagctgattacaccatttgaactcact
gctgaggaccaggacacagctgagaagctgctgaaattcaccgtcacccagttgcctgtt
catggtaaactcctctacaaccagtccacacatgtcaccagcttcacgaaacaagaccta
aatgaaaacctcatcagctacaaacacgatggcacagaatcatcagaggactccttctcc
tttactgtcactgatggcacacacactgacttctatgttttccccgacactgtttttgag
actcggcaccctcaaaccatgaagatcactattgtggcaatagacaacggcatcccccag
attgtgttgaataaaggtgctcccactttgaagatcttggccacaggtcacctggggttc
cccatcagctccaaagtgctgagggcagaggacagagacagcagcccggcctctctggtg
ttccacatcaccacccagcccaaacatggttacatcattaacctgggacacggaaacaac
tccatcaacacatttagtcaagctgacattgatgacctgaacatctgctatgtgttgcgg
aatgaggaaaatgctacatctgatcttttccatttctctgttgaggataacgggggtaac
aagctaaagggacagcagttccgtctggattgggcctggatgtctctggagaaagagtat
tatgttgtggacgaggaggacaagttcctggaggtggtgctcagacggagaggctatctg
ggagagacttctttcatcggcatcggcactcaggatggcagtgcaaagaaggaggaggac
ttcaagggtaagtcccagaggcaggtccagttcaacccgggacagaccagagccacgtgg
cgggttcggatcctgactgatgggaagtatgaacaggcggagtccttccagattttgcta
tcggaaccggtgatgggagtgatggagttccctgccacagcaacagttgagatcctggat
cccagtgatgagtcgaccgtgttcttccctgagcagatccattcagtggaggaagatgtt
ggggagcttttcatcccggtgcaccgcagtggagacattagccaggagctcatggtggtg
tgctacacacagcaggggtctgcctcaggaacaattcccaccaccgtcctgtcttactcg
gactacatctcccgtccggaggagcacggcagcgtccttcgcttcgacaagggtgagagg
gagaagcagtgtcgcgtggtgatcatcgacgactctctgtacgaggaagaagagagcttc
aatgtgactctgtcgctgcccgtcgggggacgtctgggagtgcactaccccaccaccaaa
gtcaacatcttggaagatatggatgatgctccagtgttttactttggagagttagagtat
cacgtagatgagagtgatggacatgtggaggtcaaagtgtggaggacgggaactgatctg
tccaagaccggcacagtcaccgtccgctctcgcaaggccgagcctgtctctgctgaggcc
ggtatcgactacgtgggcatcagtcataacctggactttgccccgggtgtcagcatgcag
acgttcaaggtcaccattctggatgacctaggacagccacagctggaggggactgagagc
tttgagctggtcttacgtatgccagtgcacggcatcttgggagagcctgcgaaggctaca
gtgttcatcaatgactcggtgtctgacttgccaaaggtccagttccgcgagccggtgtac
actggagaggagagtgacggtcagatcgcggtgacagtgtaccgcagtggtgacgtcagc
cacaaatccactgttcgctgttatacccgtcagggctctgcacaggtcgcctctgacttt
gatgaacggccaaacacagatgcatccatcatcgctttcttaccaggtgaggcagagaag
ttgtgtattctgtcactagttgacgacacgctgtacgaagaaggagaagagctgcggttg
atcctaggcaacccaaagagcaactcacagtttggcgcatcagtgggagctctgaatgaa
accctggtgaaaatcaaggacacagctgacaaacccatcatccgttttttggaaaccaag
ttcagtgttagtgaaccaaaagaggctggcgccatggcaactgtgaggatccctgtagta
cgagtgggtgacacatcaaaggtgtcagtggtccgcgttcacaccaaagacgggtcagct
gtctcaggagaggactactaccccgtgtctcaagacattgagttcaaacagggggataag
gaacatgtggtggaggtggaggtgctatttgatggtgtcagagagatgagagaagccttt
actctgcacctgaagcctgatgaaaacatggtggctgaaactcaggtaactaaagcgata
gtctacatcgaggagaccaacagcatggctgacgtcaccttcccctccttgcctcatgtg
gtgtctctcttccactatgacaatgtcgccaggacgccagacaacctccacccaccagcc
ggctaccctgtcatctgtgtgacagcttgcaacacaagatacccagactacgacaagacg
ggctctatctgtgtcagtgagcagatcaacaacaccctgacccgctaccgctggctcatc
agtgccccagctggccctgatggcgtcaccagtcccatgagggaggtggactttgacacc
ttctttacctcctccaagatgatcacattggactcagtctacttccaggcaggctccagg
gtccagtgcgctgctagggctgttaattctaatggggatgaaggtttagagctcagcagt
cccattgtcactatcagccaggaggaaggaatgtgtcaaccgcgtaagatggggacagtt
ggcgctgagcctttctctgccaagctacgctatactggagcagacgacctgaaacatccc
aacctcatcaaagtgactgtcaccatgcctcacatagatggcatgctcccagtaatctcc
actcgccctctgatgaactttgacctgactctcagtcccgatggaacccgggtcggaaac
caccgctgctccaacttgcttgactacaacgaggtcaccaccggtcacggcttcatcacc
gcctcgacgcgtagccctgagagcatgggagactcggtgccctatcagttcagcggctct
ctgcgggggaacagcacactgcgcttctacagaaacctcaacctggaagcctgtctctgg
gagttcaccagctactaccacatgtctgagctgctcactgactgcggaggcaccataggg
actgatggacaggtgctgaacctggtccagtcctacgtgaccctgcgcgtccctctttac
gtgtcgtatgtattccactcccctgtgggaaccggtggctggcagcactttgacctgcag
tccgagctgcgcctcacttttgtgtatgacacggccattctctggaaggatggcatcggc
agccccccacaggctgaactacagggtgcattgtatccgaccagcatgcgtatcaatgac
cagggacgtttggtggtaaacttccgcaccaaggctcgtttcaggggtctgtttgtggag
tctcattctggaggcagaataaaaagagctggaacctccaagtcatccatggtgatgagc
gtggaccaccccggcctgacctttaacctcaccttgatgaggagtgagcccacctacaac
cagccagtccagcagtggatattcacctctgacttcgctgtgagagactactctgggacc
tacacattgaagctgatcccctgtacaacagcccagaatatggagtacactgttccacct
gtttgcagtcccagagaaccagtcaccttcgacctagacatcagattccagcaagtgagc
gacccggttgcagtggaattcagtttgaacactcagatgttcttgttgtccaagaggagc
ctgtggctttctgatggctccatgggtttcggtcaggagagtgacgtggccttttctgag
ggtgatacgatctatggccgtgtgatggtggaccctgttcagaacctgggagactctttc
ttctgtaacattgagaaggtgttcctctgcactggtgctgacggatatgtaccaaagtac
aatccgaccaagtttgaatttggctgcctggctgactctccgtctctgctttatagattc
aagattgttgacaaggctcagccagagactcaggcgcgtgtgtttggtgatatcagtttt
aacgctgtgctggcagtggatgatccatcagctatgtcccttgtcagacagccagggtct
gatggctttagactggactctacagccatgttccaggttgctgcaggccgtgagtggtac
attcacaccatttacacagtccgctccaaagagaatgctaacaggggcattggaaagcgc
agcctagagtaccactccttggctgccacaagcaacgatctcaccttgactccatcaagt
ggcaaaggtcatcgctccaggaggtcggctggcaatgaggtcccagagctcgccgaggat
atcggagcaggcaacaaccgtggtaccaatatcatgcacattgctttggaccgcaccaag
cggcaggaaggggggtcgaatgaagtgtttgcccaagggttggaatctagtgagctgagc
gcagaggaggaagaggagggtctggtgaccgtggtgggggcactggtggggcttctgctg
actgtcctcatcattgtcaccaccgtacttgttctgaaatccagacagaaggatgtcaag
gaggggtggagggagggggtgcaggaggtagtgaaagggtctgtcagtacggagcccatg
ctggtggtgaggatgcaagactgccacaacagctcagaggtttga
DBGET
integrated database retrieval system
