Xiphias gladius (swordfish): 120802646
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Entry
120802646 CDS
T07311
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120802646
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
DSCAM family
120802646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
120802646
NCBI-ProteinID:
XP_040006620
LinkDB
All DBs
Position
LG17:complement(18404056..18456357)
Genome browser
AA seq
2127 aa
AA seq
DB search
MHGSLERRGGDMGGAEAPLISPPCLAGQQGWRDLRGAQSPVQHGDPPGQKTAPHTCQDCQ
IFLKNIPAIYGMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPA
GGTPSAILRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQA
GKIRSPNIRIKAVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIV
PGNRFSLTSFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTIL
DSFQAGEVYAGQSIELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDS
GSYACEVTNSFGSKEVSGQLHVVDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTITWY
RNTEPIIPDQHISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPR
IVSSFSERVVNPGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSH
VNVSSPLIRDGGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTFITCRVI
GYPYYSIKWLKDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTV
HVTVKVPPLIQPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIET
KEFMSSLQISKVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAG
VLNCSVEGYPPPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLC
QASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDT
VIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQA
NIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVVLQPMTSQSIRVTW
RAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYR
VVFWSLFPDGGGCCGGQAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAG
DGVRSNVLYIQTREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSG
QPAPSEYEANPEMLFYRITHLTRGKQYHIWAAAVTTAGRGNISAKVTVEPAGKVPAKILS
FGGTVTTPWMKEVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVK
AEDSGYYTCTATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIR
GFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKT
HGREPVFNKDQPLLTHINSTHAGLNLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTT
QLFLSELREATWYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFS
IGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSG
PLIDMSDIRPGTNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGS
HGITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTIT
ECFISDSSSDQMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHR
ANKSEFCNLPLYMKTDPFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAK
QQALTLGHSGLGSLGSSSGTATLPQRTLTMPSSNTAATASTSSTGSNPTNSNKVGGSRDS
LLESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtagtcttgagaggagaggaggggacatgggcggggctgaggcgcctctcatt
tcccctccatgcttagcggggcagcagggctggagagacctccggggagcacagtcgcca
gtccagcacggagacccgcctggccaaaaaaccgcgcctcacacttgccaggattgccag
atattcctgaaaaatatacctgctatttatggcatgtggcttgtaactttactcctgctg
tactctctccaagaagtacacagtgaggatgtgggctctaccaggctgtactttgtgaat
gcctccctgcagagggtaacctactccagctcggtgggggtgtccctgccctgtccagca
gggggcacccccagtgccatactgcgctggtacctggccaccggcgatgacatctacgac
gtgccccacatccgccacgtgcacgccaatggcactctacaactgtaccccttctcgccc
tccgcctacaacagctacatacacgacaacgactacttctgcactgctgaaaaccaggcc
ggcaagatccgcagcccgaacatccgcatcaaagctgttttcagggagccctacaccgta
cgagtggcagaccagcgctcgatgcggggcaacgtagctgtgttcaagtgcctcatcccc
actgccgtgcaggagtacgtcagcgtcgtgtcctgggagagagacaccgtttccattgtg
ccaggtaacaggttctcgctgacctcctttggagctctttacatctctgatgttcagaag
gaggatgccctctctacataccggtgcatcaccaaacataagtacagcggcgagacacgg
caaagcaatggagccaggctctccgtaatggaccccaacgagtcctcacccactatcctg
gacagtttccaagcaggggaggtgtatgcaggccagagtatcgagcttccctgcatagcg
ggaggttaccccagccccaccgtgcgctggctgaaagatggtcgcccgttgccctcagat
gcgcgctggacacggcgtttgacagggctgaccatcagcgacctgaggcaggaagacagc
ggcagctacgcctgcgaggtcaccaacagttttggctcaaaggaggtgtctggacagctt
cacgttgtagatccactacgtgtgaccttatcccctaagaatctgaaaacgggcatcagc
agcacactgttcttcacctgcactgtggagggctctccagaatacaccatcacctggtac
aggaacacagagcccatcatccctgaccagcacatctccatccaggggcaacataatgac
accctgcagatcactgcagcacagaagttccactctggggcctaccagtgctttgcctcc
cgaaagggccacaccgctcaggacttttccattattctgctagaggatggtactcctcgt
attgtgtcttccttcagcgagcgggtggtgaaccccggcgagccattctccctcatgtgt
gcggccaaaggagccccgcccccctccatcacctggacgctagacgacgagcctgtggtg
cgagactccacctacaagaccagccagtacaccctgtcggatggcctgaccgtgtcacac
gtcaacgtcagcagcccgctcattcgagatgggggggtgtatcgttgcgtcgcacgcaac
tcggccggtagcgccgagtaccaagcgcgcataaacgtaagaggtccacctcgaatcaga
cccatgcgggacatcaccgcagtggcgggcaggaacaccttcataacatgccgtgtgatt
ggttacccgtattactccataaagtggctgaaggatggcatgcagctgcctgataatcat
cgtcaagtggtgtttgagaacggcaccctgaggctgacagacgtgcagaagggtgcagac
gagggcacttacttgtgtagcgtactgatccagccccaggtgtcaatcaaccagaccgtc
catgtgactgtcaaagtgccaccgctcatccagccctttgatatcccctctacctcagtg
gggaagctcatgtacatcgcctgtgtggtgtcatctggggacatgcccatacgcatcacc
tggcacaaagacggccagctcatcgtgccaggctctgcctctggcgttgcaatagagacc
aaagagttcatgagctccctacaaatctccaaggtgacactgaagcacaatggaaactac
acctgcatcgccagcaatgccgctgccaccgtcagctgggaaagacaattgattgttact
gtgccaccacgttttgtggtgcagcccaacaaccaagactgtatctacggcaaagctgga
gttctcaactgctctgtggagggttatccaccaccaaaggtcatgtggaaacatgccaaa
ggtgtaggaaaccctcagcagtaccacccagtccctctaactggccgtatccagatcatg
tcaaacggctctctgctcatccgacatgttcttgaggacgatcgagggtactacctctgt
caggcctccaatggagtgggttcagacatcagtaagagcatgatcctcactgtcaagatt
cctgcaatgatcaccagccaccccaacaccaccatggcgagaaagggccagactaaggag
ctgaactgcacagcacgtggcgagcaacccatcatcatccgctgggagagaggggacacc
gtcattgacgcagagaggaacccccgttattccatcactatcaacaagaagggcgacgaa
gtcatctctaccctaaagctgaacccagccgagcgaggagattctgtcttcttctcctgc
catgccatcaactcttatggagagggtcgagggctaatccagctcactgtgcaagaacca
ccagatcccccagagctggaagtgagggaggtgaaggacaggagcatgaacctgcgttgg
atccaaaggtttgatggaaacagcatcatcaccagctatgacatagagtacaagaacaag
tcagactcctgggatcacatgtacaccaccaggaacatctcacccaccaacaaccaagcc
aacattgtagagttgcacccggcctgtgtttacagcattcgaatgtactcctacaataag
atcggccgcagccttcccagcaaagaactcacaatcagtactgaagaagcaccgcctgac
gggccgccaatggacgtagtcctccagccgatgacatcccagagcatacgggttacatgg
agggctcccaagaaagagctgcagaatggggtgatccgaggctaccagatcggttacaga
gagaacggtccaggcagcaacggccagtacagcatagtggagatgaaagctacgggggac
agtgaagtgtacaccttggacaacctaaagaagtttgcccagtacggggtagtggtccag
gccttcaacagagctgggaccggcccatccagtactgagatcaatgctaccacgctggaa
gatgtgcccagtgagcctccgcagaatgtgcgagccatctcggtgacgtcggatgaggcg
gtgatcacatgggcagagcctccacggctgacactgcacggtgtgctgaaaggctaccgg
gttgtgttttggtccctcttccctgacggaggtgggtgctgtgggggccaggcccagtgg
ccaatgcagaaatggggggagatgcagaatatcaccactactcgtgaacaggtggagctg
cgaggattggagaagttcaccaactacagtgttcaggtgctggcctacacacaagctgga
gatggggtccgcagcaacgtcctgtatatccaaacccgtgaggaccttcctggtccaccg
gctggcatcaaggcagttccctcttctccaagtagtgtggttgtgtcctggttacctcct
cacaaaccaaatggtgtcatccgcaagtacaccatctactgctcaagtccagggtctgga
caaccggcgcccagtgagtacgaggccaacccagagatgctcttctatcgtatcacgcac
cttacccgtggtaaacaataccacatctgggctgcagccgtgacaactgccggccgtggc
aacatcagcgcaaaggtcacggtggagcctgctgggaaagtcccggctaagatcctgtcc
tttgggggtacggttaccacaccctggatgaaggaagtgcgtctgccctgcagctcagtg
ggagagcccgcccccacaattaaatggaccaaagacagtgaggactctgccattccagtg
acagctgacagtcagcggcagatcttatccaacggcacactggtgctacgttcagtcaaa
gcagaggattctgggtactacacctgtacggcaactaacacactgggctttgacaccatc
atagtcaatcttgtggtgcaagttcctcctgaccagcctcgtctgactgtctccactacc
tccacctcctccatcaccctggcttggatccctggggacaatggaggaagctccatcaga
ggatttgtgctgcagtattctgtggacaacacagaggaatggagggatgtgttcatcagc
tccagtgagcgttcattcaggttggacaatctgcgctgtggaacctggtacaaggtcaag
ttggctgccaagaacagcgtgggctcaggccgcatcagtgagatcattgaggctaagacc
catggaagagaaccagtgttcaacaaggaccagccgctgctcacccacatcaactccact
catgcaggtctcaacctgcagggctggaccagcggcggctgccccatcactgacctgatg
ctggacttcagacccaaaggtacctgggcctggcagagcctcaaggccaactccaccact
cagctcttcctcagcgagctgcgggaggccacctggtacgagctcaaaatgaaggcctgc
aacagtgcagggtgtggaaaccagagctcccagtttgcaactactgactatgatggcagt
acaatcccccccatcaaatcagctcgcggagaaggcgatgatgtgaaaaagctgttctcc
attggctctcctgtcatcctggttactttgggtgttgctttactcttcattatccgcaag
aaacgcaaggagaagaggcttaaacgtcttagggatgctaagagccttgctgagatgctt
atcagcaagaacaatcgcagtatagacactcctgtgaaggggcctcctcaaggaccaagg
ctccatattgacatcccacgtgttcagctactcattgaggacaaggaaggcattaaacag
ataggggaagacaaggcagcagtgccagtgacagacactgaatttagccagtcagtgaat
cctcagaacttctgtacaggcgtgtctctgcaccaccaagcccttatccagaattcaggg
cctttgatagacatgtcagacatccgcccagggacgaaccccgtgtccaggaagagtatc
aaatcagctcacagctccaggaacagatactccagccagtggacactgagccgaccgagt
cagagccagtcgacagcctcggcacgaactctgacctcagactggcggacaatgggctca
catgggatcactgcgactgagagtgacagctacagtgccagcctctcccaagacacagat
aagggtcgaaacagcatggtgtcgacagagagcgcctcctccacctacgaggagctggcg
agggcctatgagcacgccaagctggaggagcacctgcagcatgcaaagttcaccattaca
gagtgtttcatctccgacagctcgtctgaccaaatgaccacaggtactaatgacccagca
gacagcatgacctccctcagcacaccgtccgaaccaggcatctgccgcttcactgcctca
ccacccaaaccgcaggactacgaccgtggtaaaaatgtggctgtgcccattccccaccgc
gctaacaaaagtgaattctgcaacctacccctctacatgaagacggatccattcttccgt
aagcaaggggagctgcatgacccatgcccggctgtgccaccgcgggaagcctcaatccgc
agcctaacgcagcgggcgtatcacacccagggccgtcacaagactctagaccctgccaag
cagcaggccctaacattgggtcattctgggctgggcagcttgggatcgagctcgggcact
gccaccttaccccaaaggactctcaccatgcccagttccaacactgcagcaacagcttcc
acttctagcacgggcagcaaccccaccaacagtaacaaggtggggggctccagagactcg
ctgctagagagcagctcttctgcactggggagactgcagaaacagagtgttggggcctac
tccaagtcatacacactggtgtag
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