Xiphias gladius (swordfish): 120802718
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Entry
120802718 CDS
T07311
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04150
mTOR signaling pathway
xgl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120802718 (lrp6)
04150 mTOR signaling pathway
120802718 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120802718 (lrp6)
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120802718 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
EGF
Motif
Other DBs
NCBI-GeneID:
120802718
NCBI-ProteinID:
XP_040006741
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All DBs
Position
LG2:complement(777420..826786)
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AA seq
1623 aa
AA seq
DB search
MGVVLRSLLLCSFCFLIRGVPLLLYANRRDLQLVDAAHEKANATVVVGGLEDAAAVDYVY
SQGFIYWSDVSEEAIKRTVFNQSGASTVQTVVPGLASPDGLACDWLGKKLYWTDSETNRI
EVAELDGSLRKVLFWQELDQPRAIALDPERGYIYWTDWGEIPKIERAGMDGTNRSMIIDK
EIYWPNGLTLDYSQQKLYWADAKHNFIHRSNLDGSSREVVVKGELPHPFALTLYEDTLFW
TDWHTHSIHSCRKQTGDEQRIVHSDIFSPMDIHVFSPKRQPILSSPCSVKNGGCSHLCLL
SPGKPYFQCACPTGVQLLEDGKTCRNGATQMLLLARRTDLRRISLDTPDFTDIILQVDDI
RHAIAIDYDPVEGYIYWTDDDVKAIRRSLLDGSDAQFVVTSQVNHPDGIAVDWVARNLYW
TDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDGM
ERVVMANTSLGWPNGLALDYDERKIYWGDAKTDKIEVMNMDGTGRRVLVEDKLPHIFGFT
LLGDYIYWTDWQRRSIERVHKRTAEREFIIDQLPDLMGLKATYVHQSFGTNPCAENNGGC
SHLCLYKPQGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPLT
GVKEASALDFDITDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL
YWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAMD
GTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPFGLT
QYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTNGH
CSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKTAINRMVIDEQQSPDIIL
PIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVSSSLGGPSQGLQLYDL
SIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLLER
SPKIERAALDGTEREVLFFSGLGKPVALAIDNEMGKLFWVDSDLRRIESSDLSGANRIVI
ADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVHELDM
REYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCTSG
EVDCIPQAWRCDGYAECDDKSDEEDCPVCSESEFQCDSRQCIDLSLRCNGEFNCQDRSDE
NKCEGVTVRCPLDQFTCSNGQCIGKHKKCDNNMDCTDNSDEIGCYPTEEPPPPPNNTIGS
IVGVVMALFVVGAVYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPSSLSSSL
PGMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRS
QYTMEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSGVAAS
AAAKGYTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCT
DSS
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgtgctgcggagtctgttgttgtgtagtttttgttttctcatacgaggcgtg
ccgctgctgctgtatgcgaaccgacgggaccttcagctcgtcgacgcggcgcacgaaaag
gccaacgccacggtggtggtgggagggctggaggacgccgccgccgtggactacgtctac
tcccagggtttcatctactggagcgacgtgagcgaggaggccatcaaacgcaccgtcttc
aaccagtcgggggccagcacggtccagacggtggtaccgggtctggcctccccggacggg
ctggcctgtgattggttagggaagaaactttactggacagactcagaaaccaatcggatc
gaggtggcggagctggacgggtccttgaggaaggtcctgttctggcaggagctggaccag
ccgagagccatcgctctggatccagaacgagggtacatttactggacggactggggtgag
atcccaaagatcgagcgggcggggatggacgggacgaatcgatccatgatcattgataaa
gagatctactggcccaacgggctgactctggactacagccagcagaaactgtactgggcc
gacgccaaacacaacttcatccaccgctccaacctggacggatcctccagggaggtggtg
gtaaagggagagctgcctcaccccttcgccctcaccctgtacgaggacactctgttctgg
accgactggcacacccactccatccactcctgtagaaaacagaccggagacgaacaacga
atcgtccactcggacatcttctcgcccatggacatccacgtcttcagccccaagagacaa
cccatcttgagcagtccgtgctctgtgaagaacgggggatgttcccacctctgcctcctc
tctccggggaagccctactttcagtgtgcctgtcccaccggggtccagctgctggaggac
gggaagacctgcaggaacggtgcgactcagatgctgctgctggctcggcggacggacctg
cggcgaatctccctggacacgccggacttcaccgacatcatcctgcaggtggacgacatc
cgccacgccatcgccatcgactacgacccggtggaggggtacatctactggacggacgac
gacgtgaaggccatccgccgctccctgctggacggcagcgacgcccagttcgtggtcacg
tctcaggtgaaccaccccgacggcatcgcggtcgactgggtcgccagaaatctgtactgg
accgacaccgggacggaccgcatcgaggtgacccggctcaacgggaccatgcgcaagatc
ctgatctccgaggacctggatgagcccagagccatcgtactggacccagtggccgggtac
atgtactggactgactggggcgaggtgccaaagatcgagcgggcagatctggacgggatg
gagcgagtggtgatggcgaacacctccctgggctggcccaacggcctcgcgctcgactat
gacgaacgcaaaatctactggggagacgccaagactgataagattgaggtgatgaacatg
gacgggacgggtagacgggtgctggtggaggacaaacttccccacatcttcggcttcacg
ctgctgggcgactacatctactggaccgactggcagcgccgcagcatcgaacgcgtccac
aaacgcaccgcggagagagagttcatcatcgaccagctgcccgacctcatgggactcaag
gccacatacgtacaccagtcctttggtacaaacccgtgtgcggagaacaatggcggctgc
agccacctctgcctctacaagcctcagggcgttcagtgcggctgtcccatcggactcgaa
ctcatcgccgacatgagaacctgcatcgtccccgaggccttcctgctcttctcccgccac
accgacatccgccgcatctccctggagaccaacaacaacaacgtggccatcccgctcact
ggcgtcaaggaggcctcggcgctcgacttcgacatcaccgacaaccgcatctactggacc
gacatcactctgaagaccatcagtcgggccttcatgaacggcagcgctctggagcacgtg
gtggagttcggtctggactacccggaggggatggcggtggactggctggggaagaacctg
tactgggccgacaccggcaccaaccgcatcgaagtggccaaactggacgggcagcaccga
caggtcctggtctggaaggacctggacagcccgcgagccctggctctggatcctgccgaa
gggtacatgtactggaccgagtggggcgggaagccgaagatcgaccgagcggcaatggac
gggacgggtcggatcactctggtggccgacgtgggccgagccaacgggctcaccatcgac
tacgcggagcgccgcctctactggaccgacctggacaccacgctcatcgagtcctccaac
atgctcggtctggagcgtgaggtgatagctgacgacctccctcacccgttcggcctcacc
cagtaccaggactacatctactggactgactggagccagcgcagcatcgagcgggccaac
aagaccagcggtcagaaccgcaccgtcatccagggccacctggactacgtcatggacatc
ctggtgtttcactcgtccagacagggaggctggaacgcctgcgcctccaccaacggacac
tgctcccacctctgcctcgccgtccccgtcagcagcttcgtctgcggctgccccgcacac
ttctccctcaactacgacaacaagacctgcagcgctcctacttcgttcctgctgttcagc
cagaaaacggccattaaccgcatggtgatcgacgagcagcagagtccggacatcatcctg
cccatccacagcctgaggaacgtccgagccatcgactacgacccgctggacaaacagctg
tactggatcgactccaagcagaacgtcatccgccgagctcaggaggacggaaaccagagt
atgacggtggtgtcgagctctctgggcggacccagccagggtctgcagctctacgacctg
agcatcgacatctacagccgcttcatctactggaccagcgaggtcaccaacgtcatcaac
gtcacccggacggacggcagcagagtcggcgtggtgctgaggggggagcatgacaagccc
agggccatcgtggtcaacccggagagagggtacatgtacttcaccaacctgctggagcgt
tctccaaagatcgagcgggcggcgttggacggtacggagcgggaggttttgttcttcagc
ggcttggggaaacccgtcgctctggccatcgacaacgagatggggaagttgttctgggtc
gactcagacctgcgacgcatcgagagcagcgacctttccggagccaatcggatcgtgatt
gcggactccaacatcctgcagccggtcgggctgacggtattcggcaaccacctgtactgg
atcgacaaacagcagcagatgatcgaacgcatcgataagacgacgcgggagggacgcacc
aagatccaggctcgtatcgcctacctgagcgacatccacgccgtccacgagctggacatg
agggagtacagtaaacacccatgcacctgggataatgggggctgctcccacatctgcatc
gtaaagggagacgggaccactcgctgctcgtgccccgtccacctggtgctgctgcaggac
gagctctcctgtggagagccccccacctgttctccggagcagttctcctgcacgtccggc
gaggtggactgcatccctcaggcctggagatgcgacggctacgccgagtgcgacgacaaa
agcgacgaggaggactgtccggtctgctccgagtccgagttccagtgcgacagccggcag
tgcatcgacctgagcctccgctgcaacggagagttcaactgtcaggaccgctcggacgag
aacaagtgtgaaggtgtgacagtgcgctgtcctctggaccagttcacctgctctaacgga
cagtgtatcggaaaacacaagaagtgcgacaacaacatggactgtacggacaactccgac
gagatcggctgctatccaacggaggagccgccgcctccacccaacaacaccatcggctcc
atcgtgggcgtggtcatggcgttgttcgtggtcggcgctgtgtatttcgtgtgtcaacgc
gtcctctgcccgcagatgaaggacgacggcgagacggtcaccaacgattttgtggttcac
gggccgtcgtccgtgccgctgggatacgtgccgcatcccagctcgctgtccagctcactg
ccaggcatgtccagagggaagtccgtgatcggctccctcagcatcatgggcgggagcagc
ggacctccgtacgaccgggcccacgtcaccggggcttcgtccagcagctcgtccagcacc
aagggcacctacttcccgccgatcctgaatcctcctccgtctcctgctacggttcgctct
cagtacaccatggagttcggttactcctccaacagtccctccacgcacaggtcctacagc
taccggccctacacctaccgccacttcgcccctcccaccaccccctgcagcaccgacgtg
tgcgacagcgactacacgccaggacgccgggcgccgctcaagtccggcgtcgccgcctcc
gccgccgccaagggctacaccagcgacctcaactacgactcggagcctttcccgccgccg
ccgacgccccgcagccagtacctgtcggcggaggagaactgtgagagctgcccgccgtcg
ccttacaccgagcgcagctactcccaccacctctacccgccgccgccgtcgccctgcacg
gactcctcgtga
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