Xiphias gladius (swordfish): 120802721
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Entry
120802721 CDS
T07311
Symbol
scaf4a
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120802721 (scaf4a)
03041 Spliceosome [BR:
xgl03041
]
120802721 (scaf4a)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120802721 (scaf4a)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
120802721 (scaf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120802721
NCBI-ProteinID:
XP_040006747
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All DBs
Position
LG17:complement(7271369..7283028)
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AA seq
1128 aa
AA seq
DB search
MDAVNAFNQELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGPDKDVFGPRFTKNITGTFENLCLCPVEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSSSAAAPYTGTDEPGSSPPPAKEPVTAVTANSSAAQLQNSDAF
AAVAQLFQSSQGQQLQQMLQNFQQQPVKPDANTQPPLHTVQTQAQNITTGLGVVTPQPLL
PTQPAQQKTTFDKKLLDRFDYDDEPEVGEETRKDDIASQPSFMQQPPAFPQHMEHFKPPM
INMSQDLSQQVPLPPNGQLQAYGLPPGQSFPVMMPPMGHALPGQPLLGSTGHPSFPGVYP
PHNAAQQQQDLSMDMDRSSNRDGRHGQRSHSGSRSPKRRRSRSNSRTRRSRHRRSRSRSR
DRRHHSPRSRSQERREREKERERRQKGLPPPKSETLSICSTTLWVGQLDKRTQQQDVACL
LEEFGQIESINMIPPRGCAYIVMIHRQDAFRALQKLSRGSYKVNQKAIKIAWALNKGIKA
EFKQYWDVELGVTYIPWSKIREDQLEELKEGGILDVDTLSPEWNGVRKTLDHPEELTHNG
RSEPQQPEETQVLPVAAAAAPPAQVPPMQQPMVGVGSLQPPVFPGPIGMPPPSFPPGVPP
PPFIRPGFNPMQMPPGFPPPGAMPLGPPPPSKGGVEDPPLDPAGLGNRPKNDEVPEGPNI
FNNQMGPMGNKVGVPPGGPPGPISGIPPGGPPGALPGGPPGNIQPPSGGLLGARPGIIPL
QRPPVPPLPHMQRFPPPHVTRPPHPNMPPMPPQMLPRGPHPQMMHHEPPPPKGGFGMPPP
HNIRAPFPPHGHGPPPQGPPPPFIRPGGPRGLEAPEEMDGRPFRGDRPGFRDREPERDRD
WDRDRDRERDRGFGGGRRPFGDGGRGGGGDRMDGRDRLGGWQEDGGNHRGGGWERDRDRD
RDRDRDRDRERDRRDWRERRSSLDSDRERGRGDDGEREHGRAEGGERGRGEGGSRERGRG
TEGKEGDRPRRSERRERTTRWDRDDRLAELENMDRFRTSNSTEQPCVTPVVTVETSKEPS
VEASQQKAESELVAPAPEVTTAAGEPVSSEPLPSAQSEPTETTQEAAS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcaacgcctttaaccaggagttattctctctgatggactccaagcccccg
atctctcgggcgaagatgatctccatcaccaaatctgccatcaaagcgatgaaactctac
aaacatgtggtccagattgtggaaaagtttatcaagaagtgcaagcctgagtacaaggta
gcaggcctgtatgtggtggattccattgttaggcagtccagacaccagtttggaccagac
aaggacgtgtttggcccaagatttaccaaaaacattactggaacttttgagaacctctgc
ctttgccctgtagaagatcggagtaagattgtgcgggtgttgaacctgtggcagaagaat
ggagtgttcaagattgaggtcatccagcccctcttggacatggcagctggctctagcagc
gctgctgcaccatatacaggcacagatgagccaggttcttctccacctccagccaaagag
ccagttaccgcagtaacagccaactcatctgctgctcagctgcaaaactctgatgccttt
gctgctgtggcacagctcttccagtcctctcagggtcagcagcttcaacagatgctccag
aactttcagcagcagccagtgaagccagacgccaacactcagcctcctctccatactgtc
caaacacaggcccaaaacatcaccacggggctgggcgtggtcaccccacaaccactcctg
cccacccaacccgcccagcagaaaacaacctttgacaagaaattgctggaccgttttgac
tatgatgatgaaccagaagttggagaagaaacaaggaaggatgacatcgcatcgcagccc
tcctttatgcagcagcctccagccttcccacagcacatggagcactttaaaccgccaatg
attaacatgtcccaagacctctcacaacaggttccccttccacctaatggccagctccag
gcctatggtttaccaccaggacaaagcttcccagttatgatgcctcctatgggacatgct
ctgccagggcaacccctccttggttctactgggcatccaagcttcccaggggtataccct
ccccacaatgcagcccagcagcaacaggatttgtcgatggatatggaccgttcatcaaat
agggatggcagacatggtcaaaggtcacactcaggctccaggtcgccaaagcggaggagg
tcacggtctaattcccgtacacgacgatccaggcacaggcgatcccgctcgcgctccaga
gaccggcgtcaccattccccgcgctctcgctcgcaggagcgcagggagagagagaaagag
agagagcgtcggcagaaaggcctcccgccacccaagagcgagacactaagcatttgcagt
acaactctctgggtaggccagttggacaaaagaacacagcagcaagatgtcgcctgttta
ctggaggagtttgggcagatagaatccatcaatatgatccctccacgtggttgtgcctat
attgtcatgatacataggcaagatgccttcagggctctacagaagctcagtaggggatct
tacaaagttaaccagaaagccatcaagattgcttgggctttgaacaagggcataaaggct
gagtttaaacagtactgggacgtggagctgggtgtcacctacataccttggtctaaaatc
agagaggaccagttggaggagctaaaagaaggaggaatactggatgtagacaccttatca
ccagagtggaatggagtgaggaagactctagaccacccggaggaactcacccacaacggc
cgttcggagccacagcagcccgaggagacacaggtattacctgtagctgctgcagctgct
cctcctgcacaggtccctccaatgcagcagccaatggttggtgtgggttctctccagcct
cctgtctttcctggtcccataggcatgcctccgccttccttcccccccggcgtcccccct
cctcctttcatcagacctggcttcaaccccatgcagatgccgccaggtttccctccccca
ggtgccatgcctctaggtcccccgcctccttccaaagggggagttgaggacccacctctt
gacccagcaggtctgggcaacagacccaaaaatgacgaggtcccagagggtcccaacatc
ttcaacaaccagatgggacctatgggtaacaaagtaggtgtacctccaggtggaccacca
ggtcctatatcaggtatacctccaggtggacccccaggtgctcttccaggtggtcctcca
ggaaacatccaaccgccctctggtggtctgcttggcgcacggcctggtataatccctctc
cagcgtcctcctgttcctccactaccacacatgcagcgtttccctccaccccacgtgaca
agaccccctcaccccaacatgccccctatgcccccacagatgttgcccagaggaccacat
cctcaaatgatgcaccacgagccccctccacctaaaggaggctttgggatgccccctccc
cacaatataagggctcctttccctccacatgggcatggccctcctccgcaaggtcctcct
cctccttttatcagaccagggggtcctcgtggcctcgaagcgccagaagaaatggatggc
agaccattcagaggagacagacctggattcagggaccgagagccagagagggacagagac
tgggatcgggacagagatagagagagggaccgaggttttggaggtggaaggcgtccattt
ggtgatggggggaggggaggaggtggtgatagaatggatgggagggacaggctcggaggc
tggcaggaagatggaggcaatcaccggggaggaggatgggagagagacagggacagagat
cgggaccgagaccgagaccgtgatcgggaaagagacagacgggactggagggagaggcga
agcagtctggatagcgacagggaaagagggaggggtgacgatggagagagggagcatggg
agggcggagggaggagaaagaggaagaggagaaggagggagtcgggaaagagggagagga
actgaaggaaaagaaggagacaggccaaggcggtcagaacggcgcgagaggaccacgcgg
tgggacagggatgatcgtttggccgaattggaaaacatggacagatttcggacctctaac
agcacagagcaaccctgtgtgactcctgtggttaccgtggaaaccagtaaagaaccaagt
gtggaagcttctcaacaaaaggccgaatctgaacttgtagctccggcccctgaggtaact
actgctgcaggagagccagtgtcctctgagcccttaccttcagctcaaagtgagcccaca
gaaacaacacaggaagcagcatcgtag
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integrated database retrieval system
