Xiphias gladius (swordfish): 120802775
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Entry
120802775 CDS
T07311
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120802775 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
120802775 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120802775 (thoc2)
03041 Spliceosome [BR:
xgl03041
]
120802775 (thoc2)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120802775 (thoc2)
Spliceosome [BR:
xgl03041
]
Complex C
Other components
EJC/TREX
120802775 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120802775 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
120802775
NCBI-ProteinID:
XP_040006847
LinkDB
All DBs
Position
LG17
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPGEWFKNWEKSGKHEFVQLCKELTEKTDHGSEVKDIQAALYELCWQVVQGNLKL
DLVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHISAALLHHNLIELEDLYVHFMPPDATIVEEHKRDISE
AKQIARKLVMVVLPSEKSEDKEKEKEKEEEKNEKPPDNQKLGLLEALLKIGDWHHAQSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGVPKGARGCVMHPLTNKRAPRPAESFE
DLRRDTFSMLCYLGPHLSHDPILFAKIVRLGKAFMKEYQTDGRPDVKDKLETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGSVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHAAYEREVNKL
KAQIKAIEENPEIPLNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPG
STGKPATSTSKTDEGTSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKSKEKGDRSAVAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHVNYNSVARSKSRERETEKKDSEN
TQGRSKEKKEEKDRKDRKRDHVVNDRETSQESKRRKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKAESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggttcaaaaactgggaaaaatcaggaaaacac
gagtttgtacaactctgcaaagaacttacagagaaaacagatcatggaagtgaggttaaa
gatatacaggccgccttatacgagctctgctggcaagttgtacaggggaacctgaagttg
gatcttgtcgccagcgtccttggggacatgatggaactccgagatgacatgccatcaatt
ttagcagatgtgttcagtatactagatttagagactggcgcactggaagaaaaaaacaaa
cgtgatcattacacacaattggtgggagcatgtttgttttttgttccggaggccatcctg
aaagagaggctggatccagaaactcttgaatctcttggacttataaaacaagctcatcag
ttcaatcagaagattgtaaaaatcaagactaaactattctacaagcaacagaagtttaat
ttgctaagggaggagaatgagggctatgccaaactaatcactgagcttggccaagacctg
tcaggcaacatcaccagccaccttgtcctggagagcatcaagtccctcataggatgtttc
aacttagacccaaatcgtgttttggacataatcctggaggtttacgagagtcgatctgac
caagatgagttcttcctgtctctcatcaagtcctatatgtgtgagccactcaccctttgc
cacattctgggctttaaattcaaattctaccaggagcccaacgaggaaacccccaagtcg
ctttaccacatttctgctgctctgcttcaccacaacctgatagagctggaagatctctat
gtacattttatgccaccagatgccaccatcgtagaggaacacaaaagagatatctctgag
gccaagcagattgcccgcaagttggtcatggttgtgttgccctcagagaagagtgaagac
aaagaaaaggagaaggagaaggaggaggagaagaatgagaagccgcctgataaccagaag
cttggtttgttggaagcactgcttaaaattggagattggcaccacgcccagagtattatg
gaccagatgccttccttctatgctacttctcataaggccattgcactggcgctctgccag
cttgtgcacctgactgtggagcctctttacagaagggccggcgttccaaaaggggcaagg
ggatgtgtaatgcacccactgacgaacaagcgagcccctcggcctgcagagagctttgaa
gacctacgcagggacacattcagtatgctctgctacctgggccctcacctctcccacgac
cctatcctctttgccaagattgtgcgtctgggcaaggccttcatgaaggagtaccaaact
gatggcagacctgatgtgaaagacaaattggaaacactactgagttgtttcctgagcatt
gcagaccaggtgcttctcccttctctctccctgatggagtgtaatgcttgcatgtctgag
gaactgtggggtctcttcaaactctttccctaccagcataggtaccggttatacggacaa
tggaaaaatgagacttattcgagtcatccactgttggttaaagtcaaagcgcagactgtg
gaaagggccaaatacattatgaagcggttgaccaaagagaatgtgaaacagtctggaagg
cagattggcaaactgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccagtggtacgacaacctcatcgttccagtggtggactccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcattatcgaggctctagccaatcctgagaaggag
aagatgaagcatgatgacaccactatctcctcgtggcttcagagcctggcaagtctttgt
ggatccgtgttcagaaaatacccaattgagttggctggccttcttcagtatgtcaccaat
cagctaaaagcagggaagagttttgacctgttgatccttaaagaggtggtgcagaaaatg
gctggcattgagatcacagatgagatgacatcagagcagttagaggccatgactggaggg
gagcaactcaaagctgagggtggctactttggccagatcaggaacactaagaagtcatca
cagcgtctgaaggacgcgctgctggaccacgaactggccctgccattgtgtctactcatg
gcccagcaacgaaatggtgtggttttcttagaaggtggagaaaaacatcttaaacttgtt
ggccacctctatgaccagtgtcatgacacattggtgcaatttggaggctttctggcctcc
aacctcagcacagaggactacattaagcgggttccctctatcgacatcctttgtaaccaa
ttccacaccccacacgatgctgccttcttcctgtcccggcccatgtacgcccatcagatt
ttgtctaagtacgatgagctgaagaaagcagaaaaaggcaaccggcagcagcagaaggta
cacaagtatgttgcagcctgtgaacaggtgatgacaccggtccatgaggctgtggtgtcc
ctccatcctgccagggtctgggacgacctccgcccgcagttctacgccaccttctggtcc
ctcaccatgtatgacctggctgtgcctcatgctgcctatgaacgcgaggtcaacaagctc
aaggcccagataaaggccatcgaggagaaccccgagatacccttgaataagaaaaagaag
gagaaagaacgctgtactgccctgcaggaaaaactgcaagaggaggagaagaagcagctg
gagcacgtccaaagggtcctacaccgcctcaaactggaaaaagacaactggttgttggcc
aaatccacaaagaatgagaccattacaaagttcctgcagctctgtctgttcccgcgctgc
atcttctcctccatcgatgctgtgtactgtgcccgctttgtcgagctggtccaccagcag
aagacacccaacttctgcaccctcctgtgctatgacagggtgttctctgctatcatttac
actgtggccagttgtacggagaatgagtctcaccgctacggacgcttcctctgctgcatg
ctggagacggtgacccgctggcacagcgaccgtgcaatctatgagaaggagtgcgtcaat
taccctggcttcctgaccatcttccgagccacaggctttgatggagggaacaaagcagat
cagctagattatgagaacttcaggcatgtggtgcacaaatggcactacatgctgactaaa
gcttcagttcactgcctggagacgggagattacacccacatccggaatattctcatcgtg
cttactaagatcctgccctgctaccccaaggtcctgaacctgggccaagcgctggagtgc
cgtgtccacaagatctgccttgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtccctgagaatgagttt
caccacaaggagcagcctgcgcgcagtgccacccctgccagtcaacagaatggccccggc
agcacaggcaagcctgccaccagcacaagcaagacagacgaggggacatcagaggatggc
gatcggggaaaggataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaacggtgctctaaacagcaccaaagccgtaaaa
gaacgggacgacaaagagaagagcgggaaagagaaaaaagagaaaaaggaaaagacgcca
ggcagcactcctgagacaaaggcggagaaccgtcgggagaagcagagagacgagagagca
gggaaggaggagcgggcggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaggctgaggagaagagcagcaaagatgacaaggccaaagctggcaatggggag
cccatggagccgtccagggagcgcgacgccatcaaggagtccaagagcaaggagaaagga
gacaggagtgctgtagccgggtccctcaagtcaccagttcccagatcagaatcggccgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgtcaactac
aattcagtagcccggtccaagagcagagagagggagacggagaagaaagactcagagaac
acacaaggccgatccaaagagaaaaaggaagaaaaggatcggaaagacaggaaacgagac
catgttgtcaatgaccgtgagacaagccaagaatccaaacgtagaaaggatgagaatgga
accaattcctccaaaaacagcaagagcacaagtccttcctgtgactccccactttcagct
gaaaaagagaagagcaaaagatccaaatcttccagcaaagagaaggcggagtctgtgaaa
cctgagcgtacgtcctccggaggcaaaaaggagtccagacacgataaagagaaatctgag
aagaaagaaaagagggacagcagcggcggaaaggaagagaaaaagcatcataaatcctcc
gacaagcacagataa
DBGET
integrated database retrieval system
