Xiphias gladius (swordfish): 120802849
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Entry
120802849 CDS
T07311
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120802849 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120802849 (cadm1a)
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
Nectin family
120802849 (cadm1a)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
C1-set
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
120802849
NCBI-ProteinID:
XP_040006954
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Position
LG17:complement(5782187..6156291)
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AA seq
445 aa
AA seq
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MANAGSGSLATTLFLFMFQAALHKGAAQYPVVSQNLVTDNVSVVEGEMAIISCRVKNNDD
SVIQLLNPNRQTIYFRDMRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIEARDEVLSEGNETEMTCTAMSSKPAATIRWMKGDKELPGKPK
VELTYDKMYTVTSRLTFTVSKEDDGVPVVCIVDHPAVKDFQAQKYLEVQYKPEVKIVVEF
PQGLTREGENLELTCQAKGKPQPKRVNWVKVDDDVPSHAVITGGDLYIENLNKSYNGTYR
CVASNSVGESYDDYILYVYDAPTTTPIPTTATTTTTTTTTITTTIFYPEASQDTAPSTEP
AAHDSRAGEGAPRTVDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDA
ADADTAIINAEGGHTNSDEKKEYYI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgctggcagtggctctctcgcgactactctctttttattcatgtttcaagcg
gctctgcacaaaggagctgcacagtacccagtggtgagtcagaacctggtgacagacaac
gtgtccgtggtggagggagagatggcgatcatcagctgtcgggtgaagaacaatgacgac
tccgttatccagcttcttaaccccaacaggcagacgatttacttcagagacatgaggcca
ctgaaagacgctcgctttcagctggtgaacttctcagacaacgagctgcgggtgtcgctg
tctaatgtctccctgtctgacgagggtcgatatgtttgccagctctacacagaccccccg
caggaagcctacgctgacatcactgtcctaatccctccaggtaaccccatcatcgaggcc
cgggatgaggtcctgagtgagggcaacgagacagagatgacctgcactgccatgagcagt
aagcctgccgccaccatcagatggatgaagggagataaggagcttccagggaagcccaaa
gtcgagctgacctacgacaagatgtacacagtaaccagccgcctgacattcaccgtgagt
aaggaggatgacggtgtaccagtggtttgcatcgtcgaccatcctgcagtcaaggacttc
caagcacagaaatacctggaggtgcagtacaaaccggaggtaaagattgtggtggaattt
cctcagggtctgaccagggaaggagagaacctcgagctgacgtgtcaggccaaaggcaaa
ccccagccaaagcgggtgaactgggtgaaggtggatgatgatgtgccctcccatgccgtc
atcaccggtggtgatctttacatcgaaaacctaaacaagtcctacaacggaacctaccgc
tgtgtggcatccaattcagtgggggagtcttacgacgactacatcctctatgtctatgat
gctcccaccaccacccctatacccaccacagccaccaccaccaccaccaccaccaccacc
atcactaccaccatcttctaccccgaagccagtcaagacactgcgcccagcactgaacct
gcagctcatgattctcgagctggagaaggagcacccagaacggtggaccatgcagtgatt
ggaggggtggtggccgtggtcgtttttgccatgctctgtttactcatcgtcctggggcgc
tacttcgcaagacacaaaggtacctacttcacacacgaagccaaaggagcagatgatgca
gcggacgcagatacagccatcatcaacgcagagggtggccacaccaattcggacgaaaag
aaagagtactacatctaa
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