Xiphias gladius (swordfish): 120803389
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Entry
120803389 CDS
T07311
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03030
DNA replication
xgl03410
Base excision repair
xgl03420
Nucleotide excision repair
xgl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120803389 (rfc2)
03410 Base excision repair
120803389 (rfc2)
03420 Nucleotide excision repair
120803389 (rfc2)
03430 Mismatch repair
120803389 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgl03032
]
120803389 (rfc2)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120803389 (rfc2)
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120803389 (rfc2)
DNA replication proteins [BR:
xgl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120803389 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
120803389 (rfc2)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120803389 (rfc2)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120803389 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
120803389 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
Rad17
Viral_helicase1
AAA_11
Mg_chelatase
RuvB_N
AAA_24
AAA_19
MipZ
DEAD
nSTAND3
AAA_5
AAA_18
AAA_assoc_2
AAA_30
MeaB
DNAX_ATPase_lid
ABC_tran
AAA_28
AAA_25
NTPase_1
SLFN-g3_helicase
RNA_helicase
AAA_23
AAA_2
MCM
bpMoxR
FtsK_SpoIIIE
DUF815
Motif
Other DBs
NCBI-GeneID:
120803389
NCBI-ProteinID:
XP_040007731
LinkDB
All DBs
Position
LG18:28613818..28618768
Genome browser
AA seq
387 aa
AA seq
DB search
MKRQFAVVRLLRRERFCCCSRAGGVETGVAMDVVMAESECEQKPTESGLKTDTEAGESSS
KSSGSAYELPWVEKYRPQKLKEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL
CLARALLGASMKDAVLELNASNERGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT
DGAQQALRRIMEIYSKTTRFALACNASNKIIEPIQSRCAVLRYSKLTDGQILARLQEVVE
EERLSVSDDGLEAVIFTAQGDMRQALNNLQSTNSGFGYINSENVFKVCDEPHPLLVKSML
GHCVDGNIDKAYKVVEQLWALGYSPEDIIGNIFRVCKTYQMAEYLKLEFIKEIGYTHMRV
AEGVNSLLQMAGLLGRLCSKTTPPAAS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcagtttgctgtcgtgcggttgctacggagggaaaggttctgctgctgttcg
cgggctggcggagtggagacaggcgtcgccatggacgtggtgatggcggagtctgagtgt
gaacagaaaccgacggaaagcggactgaagacagacacagaggccggagagagttcgtct
aaaagctccggcagcgcctacgagctgccctgggtggagaaataccgtccgcagaagctg
aaggagatcgtggggaacgaggagactgtgagccggctggaggtgttcgccagagaggga
aacgtccccaacatcatcatcgcaggtcctcccggcacaggaaagaccaccagcatcttg
tgtttggcccgagcgctgcttggagcctccatgaaggacgccgtgctggagctcaacgct
tcgaatgagaggggaatcgacgtggtgaggaacaagatcaagatgttcgctcagcagaaa
gtcacactgcccaaaggacgacacaagatcatcatcctggacgaagccgacagcatgacc
gatggagctcagcaggctttgaggaggatcatggagatctactcgaagacgacgcgcttc
gctctcgcctgcaacgcctcaaataagatcatcgagcccatccagtctcgctgcgcggtg
ctgcgttactccaaactgacagacggacagatcctcgcccggctgcaggaggtggtggag
gaggagcgtctgtccgtgtcggacgacgggctggaggccgtcatcttcaccgcccaggga
gacatgagacaggcgttgaacaacctgcagtccaccaactccggcttcggctacatcaac
agcgagaacgtctttaaggtgtgcgacgagcctcaccctctgctggtgaaaagcatgctg
ggacactgtgtggacgggaacattgacaaggcctacaaagtggtggagcagctgtgggca
ctgggctactctccagaggacattatcggaaacatcttcagggtctgcaagacctaccag
atggccgagtacctgaaactggagttcataaaggagatcggttacactcacatgcgggtg
gctgaaggtgtgaactccctgctgcagatggccggtctgctgggtcgactctgcagcaag
acaacgccccccgctgccagctga
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