Xiphias gladius (swordfish): 120803568
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Entry
120803568 CDS
T07311
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120803568 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120803568 (hnrnpa1b)
03041 Spliceosome [BR:
xgl03041
]
120803568 (hnrnpa1b)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120803568 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
120803568 (hnrnpa1b)
Spliceosome [BR:
xgl03041
]
Common components
Common spliceosomal components
hnRNP proteins
120803568 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
120803568
NCBI-ProteinID:
XP_040008089
LinkDB
All DBs
Position
LG18:15674927..15679421
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AA seq
334 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TRQEMQSAGMGMRGRNSGGRPYDYDRGFNQGGRGRYGDGPYNCNGGDGGYGGGPSGPGGY
NNGGNRGYNQGYNQGGGGGYGGNGYDSNGYGNCGGGGGGGGGGGNYNNMGHYDPQASNFG
PMKNNFGGGGGGGRNFGGYGGGSNNGGYGRPGRF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagatgtcccacgtgagccagagcagctccgcaagctgttcatcggaggtttg
agcttcgagacaacagacgagagcctgcgggctcattttgagcaatgggggagccttaca
gattgcgtggtcatgagggatcccaacagtaagagatccaggggctttggctttgttaca
tactcatcagtacaagaagttgatgctgccatgagtgctcgcccccataaggtcgacgga
agagtggtagagcctaaacgcgctgtttccagggaggactcaaaccggccaggtgcccat
gtaacagtcaaaaagatctttgttggaggcatcaaggaagatacagaggagtcgcacctg
cgggattacttccagcagtttggtaaaattgaggttattgatatcatgactgatcgtaat
agtggaaagaagaggggcttcgcctttgtcacctttgatgaccacgattcagtcgacaga
attgtcatccagaaataccacacaataaactctcacaactgtgaagtgaggaaggccctt
acaaggcaggaaatgcagagtgcaggaatggggatgagaggtcgcaacagtggcggaagg
ccctatgactatgacagaggcttcaatcagggtggcaggggtcgatatggagatggccct
tacaattgcaatggaggtgatggtggctatggaggtggtcctagcggacctggtggatat
aataatggtggcaaccgtggttataaccaaggttacaaccaaggtggaggcggaggctat
ggaggaaacggttatgacagcaacggttatggcaactgtggtggtggaggcggtggtgga
ggcggcggcggtaactacaataacatgggccactacgacccccaggcctctaactttggc
ccaatgaagaacaactttggtggcggcggcggtggtggcaggaactttggtggctatgga
ggtggttcaaataatggtggatatggccgtccaggacgattttga
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integrated database retrieval system
