Xiphias gladius (swordfish): 120803633
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Entry
120803633 CDS
T07311
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120803633 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120803633 (hdac6)
04131 Membrane trafficking [BR:
xgl04131
]
120803633 (hdac6)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120803633 (hdac6)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120803633 (hdac6)
Protein phosphatases and associated proteins [BR:
xgl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120803633 (hdac6)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120803633 (hdac6)
Membrane trafficking [BR:
xgl04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120803633 (hdac6)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120803633 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
120803633
NCBI-ProteinID:
XP_040008234
LinkDB
All DBs
Position
LG18:complement(29962502..29985052)
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AA seq
1112 aa
AA seq
DB search
MQSGPSGPDPPGSGLKSVRRSPRLSPQGSSSKEKEERKGGRSSLQEVKRRGRMEKSREEA
EEELNSRLQTLDLSSRSAASGTGLVYSEVFTHHKNLREPSHVESPDRVTSIMKELERQEL
LSHCIRVEPREATEEELLLAHMKNYVDAMRSTETMSESELHTLSEKYDSVYLHPESFQVC
VLAVGSVLQLVDQVMTSDLRNGFAVIRPPGHHAQASESNGFCVFNNVAIAARYAQTRHSV
SRVLIVDWDVHHGQGIQYLFQEDPRVLYFSVHRYEQGSYWPHLPESDSWFVGRGRAEGRN
INLPWNQTGMTDADYIAAFQQLLLPVACEFQPQLVLVSAGFDAAVGDQKGQMCVSPQCFH
VLTHMLMSLAEGRLVLALEGGYNLQSTAEGAAACVRALLGGACPPLSLPTAPSDSALQSI
SQTVSALYPHWASLQVLEGGPLAEGSVIRAINNQQSTKQTSPAPSVAMTTGLVYDERMME
HLNMWDRHHPEQPQRISKIFSKHQQLGLVDRCQRIPVRLATEEELSMCHSVQHIEQMKAT
AVMKPRDLHKLGEEFNSIYINNQSFQSAQLAAGSCFSAVERILTGQVSNGLAIVRPPGHH
AERDSPCGFCFFNTAALTARHAQKISHHAPLRVLILDWDVHHGNGTQHMFEDDDSVLYIS
LHRYDNGTFFPSSEDAAANRVGVTKGAGFNVNVAWSGGRMGDSDYLAAFHRVVMPIATEF
NPGLVLVSAGFDAARGDPLGGYHVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLSSISDS
MVMCTSVLLGDPPPSLVTPLPPPHHSAVATINEVIRHHAPYWRSLRIHIPDSVRASLPSL
KYRGKRSSKGKGRKSEQSSTNKPPLPPTGPEDTTTQCGLDQLTQGLASLDISQTSANHTP
AMSTPVGGARPKVRLSTEKVTCEGEAKAEPSVAVPEQSQSADSTPPQTQTVAAAMSKSVA
VGDEAAAGAGAEPETEGACGWSKPQTSLELMCEGQTDGSTLYVVDPLSWCPHLDVVKPPP
PSGIDVFLSCQDCSSDAENWICLTCYQVFCGRYVNEHMVIHGATSEHPLVLSFSDLSVWC
YLCEAYIHNQILFEAKNAAHCAKFGEEVPPRS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggaccgtctggaccagatcctccaggatctggactgaagtcagtcagaaga
tctcctcgtctgtctcctcagggcagcagcagtaaagaaaaggaggagaggaaaggagga
agaagcagtctgcaggaggtgaagaggagaggaaggatggagaagagcagagaggaggca
gaggaggagcttaacagcagactgcagacgttggacctgtccagcagatcagcagccagt
ggtacaggtctggtttactctgaggtcttcactcatcataagaacctgcgggagcccagt
cacgtagagagtcctgacagagtgacgtccatcatgaaggagctagagagacaggagctg
ctgtctcactgcatcagagtggagcccagagaagctacagaagaagagctgctgctcgct
cacatgaagaattatgtggatgcgatgaggtcgactgagaccatgtcagagagtgaacta
cacacactgtctgagaaatacgactctgtttaccttcatcctgagtccttccaggtgtgt
gtgttggcggtgggttccgtcctccagctggttgatcaagtgatgacctctgatctcaga
aatggcttcgctgtcatcagacctccaggtcatcacgctcaggccagcgagtcaaacggt
ttctgcgttttcaacaacgtggcgattgcagctcgatatgctcagaccagacactcagtc
agcagggtgttgatagtggactgggatgttcatcatggtcagggcatccagtacctgttc
caggaagaccccagggtcctttacttcagcgtccaccggtacgagcagggctcttactgg
cctcacctcccagagtctgacagttggtttgttggcagaggacgagctgaaggaagaaac
atcaacctgccctggaaccagacggggatgacagacgctgattacattgctgcttttcaa
caactgctgctgcctgtagcctgcgagtttcagcctcagctggttctggtctctgctgga
ttcgatgctgcagtcggagaccagaaggggcagatgtgtgtgagtcctcagtgtttccat
gttctgactcacatgttgatgagtttggctgaaggtcgactcgttctcgctctcgaggga
ggttataacctgcagtcgacagcagagggcgctgcagcctgtgtcagagctctgctggga
ggagcctgtcctcctctgagtctccccactgctccgtctgacagtgctctgcagtcgatc
tctcagaccgtctctgctctgtatccacactgggcctctctacaagtactggaaggtggc
ccattggctgagggcagtgtcatcagagcaataaacaaccagcagagcacaaagcagacc
agccccgccccctctgttgccatgacaacaggtctggtctatgatgagaggatgatggag
catctgaatatgtgggacagacatcaccctgaacagcctcagagaatctccaaaatcttc
tccaaacatcagcagctgggattggtcgatcgttgccagcggatacccgttcgcttagca
acagaggaggagctgtccatgtgtcacagtgtgcagcacattgagcagatgaaggctaca
gcagtgatgaagcccagagatctgcacaaactgggggaagagttcaactccatctacatc
aacaaccagagcttccagtctgctcagctggctgctggaagctgcttcagcgctgtggag
aggatcctgactggacaggtgagtaacggcttggcgatcgtccgtcctcctggtcaccac
gcagagagggactctccctgtggtttctgtttcttcaacacagcagcgctcactgctcgc
cacgcccagaagatctcccatcatgcaccgctgagagtcctcatcctggactgggacgtt
caccacggcaacggcacacagcacatgttcgaggatgacgacagcgtcctgtacatctcc
ctccatcgctatgacaacgggacattcttcccgtcgtcggaggacgccgctgccaaccgg
gtgggcgtgaccaaaggggcggggtttaacgtcaacgtggcctggagcggaggaaggatg
ggcgactctgattacctcgctgcctttcaccgcgtcgtcatgccaattgctaccgagttt
aaccccggtctggtcctggtgtcggccggattcgatgcagctcggggggatccgctgggt
ggatatcacgtgaccccggagggatacgcccacctcacacacctgctgatgtcattggct
gggggccgggtcctactcatactggagggaggttacaacctgtcgtccatctctgactcc
atggtgatgtgcaccagcgtgttgctaggagaccctcctccatccctggtgacgcccctc
ccccctcctcatcacagtgctgtggcaacaatcaacgaggtcatccgacaccacgccccc
tactggaggtcactgaggatacacatcccagattctgtgcgggcgtccctgccctccctg
aagtatcgtgggaaacgtagctctaaaggaaaaggcaggaagtcagagcagagcagcaca
aacaaacctccgctgccccccacaggaccagaggacacaacgacgcagtgcggtctggac
cagctcactcagggattggccagtttggacattagtcaaacctcagccaatcacactcct
gctatgtccaccccagtgggaggggccaggccaaaggtccgcctgagtacggagaaggtc
acctgtgaaggtgaagcgaaggcggagcctagcgtagccgtacctgagcagagccaatca
gcagacagcacaccacctcagactcagactgttgctgcggcaatgtcaaagtcggttgcc
gttggagacgaggctgccgctggagcgggggcggagccagagacggagggagcgtgtggt
tggtcgaagcctcagacgtctctggagctgatgtgtgaaggacaaacagacggatccact
ctgtacgtggtggaccctctgtcctggtgtcctcacctggatgtcgttaagcccccgccc
ccctcgggtatagatgtcttcctgtcgtgtcaggactgcagctctgatgctgagaactgg
atctgtctcacctgctaccaggtgttctgtggccgttacgttaacgaacacatggtgatc
cacggtgctacctctgaacatccgctggttctgagcttctctgatctctctgtgtggtgc
tacctgtgtgaggcctacatacacaaccagattctgtttgaagctaaaaacgccgctcac
tgtgccaagttcggagaagaggtccctccacggagctga
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integrated database retrieval system
