Xiphias gladius (swordfish): 120803667
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Entry
120803667 CDS
T07311
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120803667 (zgc:193690)
03015 mRNA surveillance pathway
120803667 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120803667 (zgc:193690)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120803667 (zgc:193690)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120803667 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120803667
NCBI-ProteinID:
XP_040008321
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All DBs
Position
LG18:25009339..25017019
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AA seq
487 aa
AA seq
DB search
MSEDSWALAVDVQEATTPSAQFDYSKKVDRARGPRNTRGDINGNIVPEKSENGGWIGEGD
KVDLAEQSLLNKLIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNMGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPANKWTQCLCISPTY
ELALQIGQVIEQMGKFCPDVKLAYAIRGNRMERGIKLQEQIVIGTPGTVLDWCTKYKLID
SKKITMFVLDEADVMIATQGHRDQSIRIHRQLTKDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVVCKEKEDKFTALCNLYGSLTIAQAMIFCHTRKMAAWLTAH
LTKEGHQVALLSGEMTVEQRAAVIERFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMDGNADNETYLHRIGRTGRFGRRGFAVNMVDSKHSMDIINQIEMHFNRRITKLDTSNLE
EMESLMS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagactcgtgggcgctggctgtcgatgttcaagaggcgacaactccatcagcc
cagtttgactattcaaagaaagtggatcgagcgcgtggtccacgtaacacgagaggagac
ataaacggcaacattgtgccggagaagagtgaaaatggaggctggataggagaaggggac
aaagtggacctggctgagcagtccctgctgaacaaactgattcgccgctctctggtgcgg
aacagaaaccaggtggaggtcctgcagagggaccccacctctcctctgtactccgtgaag
acgtttgaggagctcagactgaaacctgagctgttgaagggtgtgtacaacatgggtttc
aacagaccatccagaatccaggagaacgctttgcccatgatgctggcacagccacctcag
aacctgatcgcccagtcacagtctggcacaggtaaaacagctgctttttctctggccatg
ctcagccatgtaaaccctgccaataagtggactcagtgcctgtgcatctcgccaacgtat
gagctcgctctgcagattggtcaagtcatcgagcaaatggggaaattttgtccggacgtg
aaactggcgtacgccattcgaggcaacagaatggagcgaggcatcaagttacaggagcag
attgttatcggaacaccaggcacggtcctcgactggtgcaccaagtacaagctcatcgac
tccaagaagatcaccatgtttgtgttggacgaggctgatgtgatgattgccacacagggt
catcgggaccagagcattcgaatccaccgacagctgacaaaggactgccagatgctcctt
ttctcagcgaccttcgaggactccgtgtggaggtttgcagagcaggtggttcccgacccg
aatatcatcaggctgaagcgcgaagaggagacgctggacaccatcaagcagttctatgtg
gtctgcaaggagaaggaggacaagttcacagcgctctgcaatctatacggaagccttacc
attgcacaggccatgatcttctgccacactcgtaagatggccgcttggctgactgcacac
ctgaccaaagagggccaccaggtggcgctgctgagcggggaaatgacggtggagcagaga
gccgctgtcatcgaacgctttaggaacggcaaggagaaggtgctcgtgaccacaaatgtg
tgctccagaggtattgatgttgagcaggtgtcgcttgtagtcaacttcgacctccccgtg
gacatggacgggaatgccgacaatgagacgtaccttcaccggattggccgcacgggacgc
ttcggcaggagagggtttgctgtcaatatggttgacagcaaacacagcatggatatcatc
aaccaaattgagatgcatttcaacaggagaatcacaaaactcgacactagcaatcttgaa
gaaatggagagcctgatgagctga
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