Xiphias gladius (swordfish): 120803686
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Entry
120803686 CDS
T07311
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120803686 (clstn1)
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Cadherin related
120803686 (clstn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
PRIMA1
EphA2_TM
V_ATPase_I
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
120803686
NCBI-ProteinID:
XP_040008366
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All DBs
Position
LG18:complement(12804264..12842066)
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AA seq
981 aa
AA seq
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MRFRGNKRFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVVRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTIDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRASI
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSSNWTVGLPTDNGHDSDQVF
EFNGTQAIKVPDGMVSTSMKEPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQVCDKEWHHYVLNVEFPTMSLFVDGTTFEPFL
VTEDYPLHATKIETQLTIGACWQDNSGHDNDTETVSEPTSGGNARMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNLSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVTVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVEADAESEAAEGADDDPTVQETVVSEEIMHNLDT
CEVTVVGDELDGEHESLEVDMSHLQQRGLEMSSSNLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPLEHVNNAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEDESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaataaacgatttgcatccgctgtcggactggtcctcggactatta
tgtgcggtggaggcagctaaagtcaataagcacaaaccctggattgagacgacataccac
gggattgtaacggaaaatgatgacaaagtacttctggacccccctctaattgcactggac
aaggatgctcccctacgctatgcagagagttttgaggtgaccctcactgaagaaggtgaa
atttgcggcttcaggatccacgggcagaatgtcccatttgaggcagtggtcctggacaag
tccactggcgagggtgtcgtccgagccaaggacaagcttgactgtgagctgcagaaggag
cacaccttcaccatccaagcctacgactgtggagagggtcctgatggcgccaacatgaag
aaatcccacaaggccactgtccacatccaagtcaacgacatcaatgagtattcacccgtg
ttcaaggagaagtcctacaaagccaccgttatcgagggaaaaaaatatgacagcatcttg
aaggtggaggcagtcgacgccgactgctcgttccagtttagccaaatctgcaactatgag
atcgtcacccctgatgtgcccttcaccattgacaaagatggcttcatcaagaacacagag
aaactgagctacggcaaagagcgcatgtataagctgactgtgactgcctacgactgtgga
aagaaccgtgcctccgaggatgtgcttgtcaagatcagcgtcaaacccacctgcaaaccc
agttggcaagggttcaataagaggattgaatatgagcctggcacaggcagcctggccctt
ttccccagcatgcacttggagacctgtgatgagccaatcacctccatccgagccagtatt
gaactggaaaccaaccatattgggaagggctgtgaccgtgacacttactctgagaagtcg
ctgcacaagctgtgcggagccagctccggcaccgtggagctccttcctgcacccagcagc
tcctccaactggacagtagggctgcccaccgataatgggcatgacagtgaccaggtgttt
gagttcaatggtacccaggccatcaaggtccctgatggcatggtgagcaccagcatgaag
gagcccttcaccatctctgtatggatgagacatggccctggggcccatgagaaagagacc
atcctctgcaactctgacaagacagagatgaacagacaccactactcactctacgtccac
aactgcagactgatcctcctcctccgtcaggatccatcagaggctgagaactacaaacca
gcagagtttcactggaaacttgaccaggtgtgtgacaaagagtggcatcactatgtgctg
aatgtggagttccccaccatgtctttgtttgtggatgggactacctttgagcccttcctg
gttacagaggactacccactgcatgccaccaagattgaaacacagctcactattggtgcc
tgctggcaagacaactcaggacatgacaatgacactgagacagtctctgagcccacctca
ggcggaaatgctcgaatggctcagtttttccgggggaacctagcggggctgatgatccgc
tctggcaaactggagaacaagaaggtgatcgactgtttgtacacctgcaaggagggcctg
gatgtgcagctgcctgaggaggtggcgtcagctgtcaaggtggagttcaaccctaacctg
tcctctctgaccgtggagggcgacgacatcgatgcctttgacaaggtcatgcagcacatc
tcctacttgaactcccgccagtttccgacccctggcatcagacaccttcgaatctccacc
actgtcaaatgcttcaatgaggagtcctgcgtaacggtgccagatgctgagggttatgtg
atggtactgcagcccgaagaaccgaagatcagcctgagcggaattgaccacttcgcccgc
agcgctgctgaattcgagagccaggaaggtgtgacgctgttccccgagctacgcatcgtg
agcaccatcacccgcgaagtagaagccgacgccgaatctgaagctgcagaaggagctgat
gatgaccccacggtccaagagacagtggtgtcagaggagatcatgcacaacctggacaca
tgtgaagtgacagtggtgggagacgaactggatggggagcatgagagcctggaggtggac
atgtcccatctgcagcagcgtggtctggagatgagctcttctaacctgggccttgtcatc
acaggtgtgaacaccatggccaactatgagcaggtcctgcacctaatccgttacaagaac
tggcacaccgaggctctctttgacaggaaattcaagctggtctgctctgagctcaacggt
cgctacatcagcaatgacttcaaggtcgaggtgaacgtaatccacacagccaatcccttg
gagcatgttaacaatgccatggtgcagcccaatttcattaaccccgtccatcatgcctct
gtggatctgtctggtcacaacctggtcaacgctcaccaggcctcagtggttcccagcgct
gccaccattgtcattgtggtgtgtgttagcttcctggtgttcatgatcatcctgggtgtg
ttccgcatccgagctgcacaccagcgaaccatgagagaccaggagaatggcaaggagaac
gagatggactgggatgactcagctctcaccatcactgtcaaccccatggagacgtacgag
gaccagcacagcagtgaggaggaggaagaagaggaggatgagagcgaggatggagaggag
gaagatgacatcacgagcgctgagtcagagagtagcgaagatgaggagggcggggagccg
gaagaccagcagggggccagcagacagcaacagctggagtgggacgactccaccctcacc
tactaa
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