Xiphias gladius (swordfish): 120803805
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Entry
120803805 CDS
T07311
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120803805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120803805
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Major cadherins
120803805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Cadherin_CELSR2_9th
DUF2254
DUF2304
DUF5527
Motif
Other DBs
NCBI-GeneID:
120803805
NCBI-ProteinID:
XP_040008664
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Position
LG18
Genome browser
AA seq
934 aa
AA seq
DB search
MRTDFALVLTAALLLDKFWRNNGEHASKDPCRPGFSQSFYSVLISRDVLQGQGILKDTTV
SSQKVKFDDCMGNEAVVFQSSDPIFSVRTDGSIFAQGEGASLNEPVQFRLKASGPHTHIW
ETVVQLALMDPPSTQQNGNEVTKEEGKLAERKEKTDAFQAPPPIIMFSGSGLNSSKGLRR
QKRDWVIPPINVAENSRGPFPQMLVSIRSDQDQDISIRYSITGVGADQPPNEVFNIDPVL
GKMFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSV
DEGSKPGTYVMHLSAFDADDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAPG
LDREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENRV
DVVVANLTVIDADQPHSPNWNAIYRIISGDPSGHFTIRTDPVTNDGMVTVVKPVDFEMNR
AFMLTVVVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPYFPTNPKHIRFEEGVPAGTSL
TTFSASDPDRLQMQQTIRYSKLNDPADWLSINRTNGQIVTTAMLDRESIYVKNNIYEATF
LATDNGAPATSGTGTLQIYLIDINDNPPALIPRESQICERMNKNVNGVNITAADADTDPN
AGPFVFELHNFPTSIRRNWTISRLSGNYARLGLRYQIYLEPGVYEVPVIVSDSGNPPLSN
RSVIKVKVCPCDENGDCTTLGAVAAAGLGTGAIISILICIIILLSMVLLFVVWIKRREKE
RQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIINKPPGVRRVDER
PIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSS
LNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgacttcgctctggtcctgacagcagcccttcttcttgacaaattctggagg
aataatggggagcatgcttccaaagatccctgccgacctggcttctcacaaagcttctac
tctgtgctgatttcaagggatgtactgcaaggccagggcatacttaaagataccacagta
tcatcacaaaaagtgaagtttgacgactgtatggggaatgaagcggtggttttccagagc
agtgaccccatcttcagcgtgcggacagatggatccatctttgcccagggagagggagct
agcctaaatgaaccggtccagtttagactgaaagcaagtggtccacacacacatatctgg
gagactgtggtccaactggctctgatggacccaccatcaactcaacaaaacggaaatgag
gtcacaaaggaagaggggaaacttgctgagagaaaagagaagacggacgcgttccaagct
ccacctcctatcatcatgttctcagggtctggcctgaacagctccaagggtctacggagg
caaaagagggactgggtgatccctccaatcaacgtggcagaaaattctcgaggaccgttc
cctcagatgctagtcagcattcgttcagaccaggaccaggacatctcgatccgatatagc
atcactggggtgggagcggatcagccaccaaatgaggtcttcaatattgatcctgtgctt
ggaaagatgttcgttaccaaacctcttgatcgagaacatcgctcttcttaccatttgcgt
gcccatgccgtggacatgaatgggaaccaggttgagaatcccatcgatctgtacatcttt
gtcattgacatgaatgataacagacccgagttcaaaaaccaagtctacaatggctctgtg
gatgaaggctctaaaccaggaacctatgtgatgcacctgtcagcgtttgatgccgacgac
aacaccaccgctaatggaatggtgcgctatcgaatcctgtcccagacgccacacagcccc
atccctaacatgttcaccatcaacagtgagactggagatattgtgacagtggcacctggt
cttgatcgagagaaagtgtcccagtataccatcatcgtgcaggccacggacatggagggc
aacctgaactttggcctttccaacacagccactgccatcatcactgtcacagacatcaac
gacaaccctcccatgctgacttccagaactttttcaggtgaggtcccagagaatcgagtg
gatgtcgtggtggctaatctgacggtgatagatgctgaccaaccacactcgcctaactgg
aacgccatctacaggatcatcagcggagacccatctgggcatttcaccatccgcactgac
cctgtaaccaatgatggcatggtcaccgtggttaagccagtagactttgagatgaaccgt
gccttcatgctgacggtggtggtatccaaccaggcccaccttgcaagtggcatccagtct
tcgctccagtccacagctggggtcaccatatctgtccaggatgtcaatgaacccccttac
ttccccacgaacccaaaacacatccgctttgaagagggtgtccctgctggcacaagcctg
acaaccttctcagcctcagatcctgaccgactacagatgcagcagacaatcaggtattca
aagctgaatgaccctgcggactggttgtccatcaacagaaccaatggtcagatagtaacc
acggcaatgctcgaccgggagtccatctatgtcaaaaacaatatatatgaagccacattc
ctggcaacagacaatggcgctcctgccaccagtggcacaggcacattgcagatctatttg
atagatattaatgacaaccctccagcactcatacccagggagtctcagatctgtgagagg
atgaacaagaatgtcaacggtgtcaacatcactgccgctgacgccgacacggaccccaac
gctggaccttttgtcttcgagctccacaacttccccaccagtatccgtcgcaactggacg
atttctcggctcagtggcaactatgcccgcctcggtctgcggtaccagatatatttagag
ccgggggtgtatgaggtccctgtaattgtgtcggactcaggaaaccctccattgtccaac
aggtcagtcatcaaagtgaaggtgtgtccctgcgatgaaaatggagactgcaccactctc
ggggccgtggcagccgctggcctgggaactggagctatcatctccatcctgatctgcatc
atcatactgctcagcatggtgctattgtttgtggtatggatcaagcgcagagagaaggag
aggcaaacaaagcagctgctaattgaccctgaagatgatgtcagagacaacatcctcaaa
tatgatgaagagggaggaggagaagaggaccaggactatgacctgagccagctgcagcag
cccgactccttggagcacatcatcaacaagccgcccggtgtccgcagggtggacgagcgt
cccatcatccctgagtcccagtacccgattagacctgtcgtgccccatcctggagacatc
ggggacttcatccacgagggtctgcgagcagcagacaacgaccccaccgctcctccttat
gactccctgctggtgtttgactatgagggcagcggctccaccgctggctctgtcagctct
cttaactcctccagcacaggggaccaggactatgactacctcaacgactggggcccacgc
ttcaagaagctggccgacatgtacggaggaggggatgatgattaa
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