Xiphias gladius (swordfish): 120803861
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Entry
120803861 CDS
T07311
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04120
Ubiquitin mediated proteolysis
xgl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120803861 (ube4b)
04120 Ubiquitin mediated proteolysis
120803861 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120803861 (ube4b)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120803861 (ube4b)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
U-box type E3
120803861 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
120803861
NCBI-ProteinID:
XP_040008773
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All DBs
Position
LG18:complement(12770597..12790651)
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AA seq
1344 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPNTPLSTPLTSPQRETPPGPLHGPSGAPPQPLPPAA
SQSLGLSVHNGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCDKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSSNSDVSEEQALQLISKILRVS
WKEQDRDVIFLPSLAAEFHQNPKDAYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATS
QPIAAAKSPDHRLTLVQPSSLGGSPMGPSAGSFGASSLSSLYGCGSPHPMALDAAKRTSP
SLPTPTTPSAPSTPSTPQFIVPPSPPVTATPRHPLNPPSAPMPISQRYRPYSVASPWGAP
SPSSSGHRGLGIFGPTPSSAGPSVPPNTPVPVPPPSPQSLSLSSPRARNLPSSTPPLMVP
PSLRSNTRQTAFGSRIPPSSLGACGGGMSCDSPSDRFTIEACKETEMLNYLIERFDSVGM
EERKAPKMCSQPNVSQLLSNIRSQCISHVALVLQGTMTQPRSPLQQSLLVPYMLCRNLPY
GFIQELARITHQEEEVFRQIFIPILHGLALAVKECSFDSDNFKFPLMALAELCEIKFGKT
HPVCNLVTSLPLWCPKPLSPGCGREIQRLSYLGAFFSLSVFAEDDTKVGDKYFSGPAITM
ENTRVVSQSLQHYLESARGDLFKVLHNILLNGETRELALNYMAALVNYNVKKAQMQTDDK
LVSTDGFMLNFLWVLQQLSMKIKLETVDPYYIFHPRCRLVVSLEETRLKATMEELKSWLT
ELHEDLTKFSEPKFPTECFFFTLHTHHLSILPGCRRYIRRLRAIRELNRTVEELKNSESQ
WKDSPLASRHREMLKRCKTQLKKLVRAKACADVGLLDENLLRRCLQFYSTVIQLILRMVD
PSYPNITLPLNPEIPKSFAALPEFYIEDVAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFI
CSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQRFSEMMENHPLSIKQLVPALMKFYTDVEH
TGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLD
ESLESLKRIHEVQEEMKNKEHWEQLPREQQQSRQSQLTQDERVSRSYLALATETVEMFHI
LTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIY
LQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNS
QSEMDYSDAPDEFKDPLMDTLMTDPVILPSGNIMDRSTILRHLLNSPTDPFNRQPLTESM
LESVPELKERIHAWMREKQGGRPV
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattgagcgcagatgagattcgcagaaggcgactggcgcgactggcaggggga
cagacttcacagcccaatacccctctcagcacacccctgacatccccacagagagagact
ccacccggaccccttcatggaccctcaggcgccccaccccagccccttccaccagctgcc
tcccaatcattggggctcagtgtccacaatggtacccctgccacatcccctatgggcacc
tctggggttgcatatggtagtcagagcagcgagggtgtcagttccctgtccagctccccc
tcaaacagccttgagacccagtcccagagtttgtcccgatcgcagagcatggacattgac
actgcctcctgtgataagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggaggacagcgatcggagagagaagaggaatttgactgaaaaggaaacctcttca
aactcagatgtctctgaagaacaggctctgcagctcatctctaagatcctccgcgtatcg
tggaaggagcaggatagagatgtcatctttctcccttctctggctgcagagttccaccag
aatcctaaagatgcatactctgacttcaaagacctgatcggacagatcctgatggaagtc
ttaatgatgtccacccagtcacgtgtccacaacccctttgccagcttgaccgccacctct
cagccaattgcagcagccaaatctcccgaccatcgtctgacgctggtgcagccctccagc
ctaggtggcagtcccatgggccctagtgcagggtcctttggagccagctctctgtctagt
ctgtatgggtgtggtagtcctcacccaatggctttggatgcggcaaagaggacttctccg
tctctccccacccctactacaccttctgcaccttctacaccctctaccccacaattcatt
gttccgcccagcccacccgttactgctactccaagacaccccctcaacccaccatctgcc
cccatgcccatctcccaacgctatcggccttactctgtcgcctctccctggggggctcct
tccccatctagctcgggtcacagaggattgggtatctttggacccactcctagctctgca
gggccctctgtccctcccaacaccccagttcctgtgccaccacccagcccccagtccctc
tctttgagctcacctagggctcgcaacctaccctcctctacaccacctctcatggtgccc
ccttctctcagatcaaatacccgacagaccgcctttggatccaggatcccaccgtctagt
cttggtgcatgtggaggagggatgtcctgcgattcacccagtgaccgcttcaccattgaa
gcatgcaaagagacagagatgctgaactacctcattgagcgttttgacagtgttggcatg
gaggagaggaaagctcccaagatgtgcagccaaccaaatgtcagccagcttctcagcaac
attcgctctcagtgtatttctcatgttgctctggtcctgcaaggcaccatgacccagcct
cgaagccctctccagcagtctctgctggtaccttatatgctgtgtcggaaccttccatat
ggctttattcaggagctggcacgcattacccaccaggaggaagaagtgttcagacagatc
ttcattcccatcctccatgggctggctcttgcagttaaagaatgttcttttgacagtgac
aactttaaattccccctcatggcattagctgagctttgtgaaatcaagtttggaaagact
cacccagtgtgcaatttggtaacgtcgctccctctatggtgtcccaaacctcttagccct
ggttgtggcagagagatccagagactgtcctacctgggagccttcttcagcctctctgtg
tttgctgaggatgataccaaagtaggagacaaatatttctcaggcccagccatcaccatg
gagaacacgagagttgtcagccagtcattgcagcactacctggagtcagcaaggggtgac
ctgttcaaagttctccataatatcctactaaatggagagacacgcgagttagctcttaat
tacatggcagctttagtcaactacaatgtgaaaaaagcccagatgcagactgatgacaag
ctggtgtctacagacggtttcatgctcaacttcttatgggtgctgcaacagctgagcatg
aagatcaagctggagacagtggacccttattacattttccatccacgctgtcgtcttgtt
gtcagcctagaggaaacgcgtctaaaggccactatggaggagctcaagagctggctgacg
gaactgcatgaagacctcaccaagttctcagaacccaagttccccactgagtgtttcttc
tttacgctgcacacccaccatttgtccatcctgcctggctgcaggcgttacatccgtagg
ttgcgagccatccgtgaactgaataggactgtagaggagctgaagaacagtgaaagccaa
tggaaagattctcccctggccagtcgacacagggagatgctcaagcgatgcaaaacccag
ctcaagaaactggtgcgagccaaagcttgtgctgatgtgggccttctggatgagaacctg
ctccgcagatgtctgcagttctacagtacagtcattcagctcattctccgcatggtggac
ccttcctaccccaacattaccctgccactgaatcctgagattcccaaaagctttgctgct
ctccccgagttctacattgaagatgtggccgagtttctgctttttgtcgtgcagtattct
ccccaggttttatatgagccgtgcgtccaggacattgtcaccttcttggtagtgttcatc
tgcagccagaactacatcaggaacccctaccttattgccaagttggtggaggtgctgttt
gtcaccaacccagctgtacagcctcgtactcagcgattttctgaaatgatggagaaccac
ccgttgtccatcaaacagctagtccccgccctgatgaagttctacactgatgtggagcat
accggcgccaccagcgagttctatgataagttcactatacggtaccatatcagcactatt
ttcaagagtctctggcagaatattgcccaccatggcaccttcatggaggagttcaactct
ggcaagcagtttgtgcgctacatcaacatgctgattaatgacaccaccttcttgttagac
gagagccttgagtccctgaagcgtatccacgaagttcaagaagagatgaagaacaaggag
cactgggagcagctacctagggagcagcagcagagccgccagtcccagctgactcaggat
gagcgggtgtctcgctcctatctggccttggccacagagacggttgaaatgttccacatc
ctcaccaagcaggtccagaagcctttcctcaggcctgagctggggcctcgtttagctgcc
atgctgaactttaacctacagcagctctgtgggcccaagtgtcgagacctgaaggtggag
aaccccgagaagtatggctttgagcccaagaagctcttagaccagctgacggacatctac
ctgcagctagactgtgcccgctttgctaaagcaattgcagacgaccagcggtcgtacagc
cgtgagctctttgaagaagtgatctcaaaaatgaggaaggctggaattaagtcctccatc
gccattgaaaaattcaaactgttgtcggagaaggtggaggaaatagtcgccaagaactcc
cagtctgaaatggactacagcgatgcacctgacgagttcaaagaccctctgatggacaca
ctgatgactgaccctgtgatcctgccttcggggaacatcatggaccgttccaccatccta
cgccatctgctcaactcccccactgatcccttcaataggcagccactcacagagagcatg
ctggaatcagtccctgagctgaaggagaggatccatgcctggatgagagagaagcagggt
ggtcggcctgtctaa
DBGET
integrated database retrieval system
