Xiphias gladius (swordfish): 120803988
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Entry
120803988 CDS
T07311
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120803988 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xgl03310
]
120803988 (rarga)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120803988 (rarga)
Nuclear receptors [BR:
xgl03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
120803988 (rarga)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRIMA1
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
120803988
NCBI-ProteinID:
XP_040009011
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Position
LG18:15419077..15463211
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AA seq
501 aa
AA seq
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MFDCMEALGMGPRQLYDVTSRGACMLRKASPFFAGLDPFAWTGSASVQSVETQSTSSEEM
VPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSGELEELVNK
VSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFT
TLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF
AFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIYARRRRPNK
PHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEDQTECNESP
PPPPPPPPPPPALVLKQEAEDEDDSWATENGSEPSPEEEDEDDDDDVGDEERDRGSDSDG
ESWGVLDAIDGSRKGLVGRAQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgtatggaggcgttgggaatgggcccccgtcagctctatgatgtcaccagc
cgcggtgcatgtatgctgcggaaggcaagccccttctttgcagggttggacccctttgct
tggacgggcagtgccagtgttcagtcggtggagacccagagcaccagctctgaggagatg
gtacccagttctccgtctccacctcccccacctcgtgtctacaagccctgctttgtgtgc
caggacaagtcctcagggtaccactacggggtcagctcctgtgagggctgcaagggtttc
ttccgccgcagtatccagaagaacatggtgtacacctgccaccgagacaagaactgtcag
attaacaaggtcacacgcaaccgctgccagtactgcaggctgcagaagtgctttgaggtc
ggcatgtccaaggaagcggtgcgtaacgacagaaacaagaagaagaaggatgtgaaggag
gaggtagtgcttcctgagagctatgagctaagtggagagctagaggagttggtcaataaa
gtcagcaaagctcaccaagaaaccttcccatcactttgccagttgggcaaatacaccacc
aactctagctcagaccaccgcgtccagctggatctgggtctatgggacaagttcagtgag
ctctccaccaaatgcatcatcaagattgtggaattcgccaagcggctgccaggtttcacc
accctcaccatcgcggaccagatcactctacttaagtcggcctgcctggacatactgatg
ctgaggatctgtacacgctataccccagaacaggacactatgaccttctcagatggcctg
actctgaaccggactcagatgcacaacgccggcttcggaccactcacagacctggtgttt
gccttcgctggccaacttctacccctggagatggacgacacagaaaccgggctcctcagt
gccatctgcctcatctgtggagatcgcatggatctagaagaaccccagaaagtggataag
ctgcaggagcctctacttgaggctctgaagatctatgcacgccgccgccgccccaacaag
ccccacatgttcccccgcatgctgatgaagataactgacctcaggggcattagcaccaag
ggtgcggagagagccatcactctgaagatggagatccctgggcccatgcctcctttgatc
agggagatgcttgagaatccagaagctttcgaagaccaaacagagtgcaacgagagcccg
ccgcctccgccaccgccgccacctccaccgccagccctggtcctgaagcaggaggctgag
gatgaggacgacagctgggccacagagaacggcagcgagccgtcaccggaggaggaggac
gaggatgacgatgacgacgtgggagacgaagagcgagacaggggctcggacagtgatggg
gagtcctggggggttctggatgccatagatgggtcgaggaaaggccttgttggaagggcg
cagtga
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