Xiphias gladius (swordfish): 120803990
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Entry
120803990 CDS
T07311
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04110
Cell cycle
xgl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120803990 (smc1a)
04114 Oocyte meiosis
120803990 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120803990 (smc1a)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120803990 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
120803990 (smc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
DUF8567
Motif
Other DBs
NCBI-GeneID:
120803990
NCBI-ProteinID:
XP_040009016
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Position
LG18
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGSSSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIEKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVEMAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CEEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQLDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSSVLAKEALIEIDYSNLSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatagaaattgaaaacttcaagtcgtacaaaggaagacagatc
attggaccttttcataagtttactgcaatcatcggacccaatggatctggaaagtccaac
cttatggatgccatcagcttcgtgttggcggagaagaccagtaacctgcgtgtgaagact
ctgaaggatctaattcatggagcacctgtagggaagccagctgccaacagagcctttgtc
agtatggtgtatcaggaggataatggagaggaacgctccttcacaagggtcattattggt
tcctcttctgagtaccgcatcaacaacaaggtggtgggcctgcctgaatacagtgaggaa
ctagaaaaacttggcatcctgattaaagctaggaacttcctggtctttcagggagccgtg
gagtccattgccatgaagaaccccaaggagcgtacagctctgtttgaggagatctcccgt
tccggagagctggcccaggagtacgaccgcaggaagaaggagatggttaaagcagaagag
gacacacagttcaattatcatcgcaagaaaaacattgctgctgagcgcaaagaagccaag
caagaaaaagaggaggctgagcgttaccagcgtctgaaggacgaagtagccagggccagt
gttcagttgcagctcttcaagctttaccacaatgagactgagattgagaagctgaacaaa
gagctgggccagcggaacaaggagattgagaaggaccgtaaaaagatggaccatgtggag
gaggagctgaaggacaagaagaaggagctgggcagactgatgagggagcagcaaaccatt
gagaaagaaatcaaagagaaggactctgagttgaaccaaaagaggccacagtacatcaag
gccaaagagaacacctcacacaagatcaagaagcttgaggcggcgcgcaaatcactgcaa
aatgcccagaagatgtataagaaacgcaaggcagacatggatgagctggataaagagatg
agggcagtggagatggccaagcaagagtttgaggagagaatggaggaggaggcgcaaagc
cagggccaggacctcaccctggaggaaaaccaggtcaagcagtaccatcgtctgaaagaa
gaggccagtaaacgtgctgctacactggcgcaggagctggagaagttcaaccgtgaccag
aaggcagaccaggaccgccttgacttggaggagaggaagaaagtggagactgaggccaaa
atcaaacagaagatccgtgaaattgaggaaaaccagaaacgtattgagaaattagaggat
tatattgccaccagcaggcagtcactagatgagcagaagcgcatggaggaggagctgaca
gaggaggtggagatggccaagaggaggattgatgagatcaacatggagcttaaccaggta
atggaacagctgggagacgccagaatcgacaggcaggagaacagtcgccagcagcgcaag
gctgagatcatggagagtatcaaacgactctaccctggctctgtgtatggtcgtctaatc
gacctgtgtcagcccactcagaagaagtatcagattgctgtgaccaaagtgttgggcaag
aacatggatgccatcattgttgactcagagaagactggcagagactgtatacaatacatc
aaggagcagagaggagagcctgagaccttccttcctctcgactaccttgaggtgaaacca
acagatgagaaactcagagagctgcgaggagccaagctggtgattgatgtgattcgctac
gagcccccgcatatcaagaaagccctgcagtatgcatgtggcaacgccctggtctgtgag
aacgtagaagatgcacgaaggattgcttttggggggccataccgacacaagacggtagcc
ctggacggtactctgttccagaagtctggagtcatttctggaggagccagtgacctgaag
gccaaggccagacgctgggatgagaaagcagtggacaagctcaaggaaaagaaagaaaaa
ctcactgaagagcttaaggagcaaatgaaggccaagaggaaggaggcagagctgcgccag
gtgcagtcacaggcccacggtctgcagatgagactcaagtactcccagagtgacctggaa
cagaccaaaacccgccacctctccctcaacatgcaggagaagtctaagctagagagtgaa
ttggcaaactttggccctcgcatcaatgacatcaagaggatcatccagtcccgtgagagg
gagatcactgacctgcgcgaccgcatgaacttggtggaggatgaggtgttcgtggaattc
tgtgaggagattggcgtgaggaacatcagagagtttgaggaggagaaggtgaagaggcag
aatgagattgcaaagaagcgtcttgagtttgagacccagaagacccgtctgggtatccag
ttagactatgagaagaaccagctgaaggaggaccaggagaaagtcatgatgtgggagcag
accgtcaagaaggacgaggctgaaatagagcgacttaagaaggaggagcacagacacatg
aagatcattgatgagacaatggcccagctgcaggatctgaagaaccagcacctcaccaag
aaatctgaagtcaatgataagaaccacgagatggaggagatccgcaaaaaactgggtggt
gccaacaaggagttgactcagctacagaaggaagttacagccattgagaccaaactagaa
cagaagcgtagtgaccgtcacaacttgctgcaggcctgcaaaatgcaggatatcaggttg
cctcttcgttctggaacaatggatgatatcagccagggagaggggagctcccaaacagat
gagtccagcagccagaggacgtccagtagtgttctggctaaagaagctctcattgaaatc
gactacagcaacctgtctgaagatcttaaggatgcgctctcagaggaagagatcaaggca
gagacaaacacactgcagcagcgtctgaatgagcaacagagcattctgcagaggatcagc
gcacccaacatgaaggccatggagaagctggagagcgtcagggacaagttccaagagacc
agtgatgagtttgaagccgctcgtaagagagccaagaaggccaagcaagcctttgagcag
atcaagaaggaaaggtttgatcgtttcaatacctgctttgagtctgtggccaccaacatt
gatgagatctacaaggccctctcacgcaatagcagtgcccaggctttcctgggcccagag
aaccccgaggagccgtacctggatggcattaactataactgtgtggctccagggaagagg
ttcagacccatggacaacctgtctggaggagagaagactgttgctgccctagctctgctt
tttgccattcacagctacaaacccgcacccttctttgtcctggatgagattgacgctgcg
ctggacaacactaacattggaaaggtggccaattacatcaaagaccagtcagtgcagaac
ttccaggccatcgtcatttccctgaaggaggaattctacaccaaggcagactccctcatc
ggtgtttatccagagcaaggagattgtgtcatcagcaaagttctcacctttgacctctct
cagtatcctgatgccaacccaaatccaaacgaatag
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integrated database retrieval system
