Xiphias gladius (swordfish): 120804070
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Entry
120804070 CDS
T07311
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1 isoform X1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl02010
ABC transporters
xgl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120804070 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120804070 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xgl02000
]
120804070 (abcd1)
Enzymes [BR:
xgl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
120804070 (abcd1)
Transporters [BR:
xgl02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
120804070 (abcd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
Adeno_IVa2
SMC_N
AAA_5
ORC-CDC6-like
Rad17
AAA_15
AAA_28
AAA_7
AAA_18
ATPase_2
Motif
Other DBs
NCBI-GeneID:
120804070
NCBI-ProteinID:
XP_040009183
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Position
LG18:30200443..30225892
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AA seq
758 aa
AA seq
DB search
MQLTYQKLPADLRRSSRLRKLTAVLLAAYAVKKLSPYVWRRIQRSTAGKQLGGVNLPVGV
VPSSSSSVENSGGKKNSDSRSPSVNRDFVLRLSRMLKLLFPRLLCPEFGLLALHSVTLMS
RTFLSIYVAALDGAIVKCIVQKDPQAFVLQLSKWLLVAVPATFINSAIRFLEGQLTLRFR
SRLVNHAYQLYFTNQTYYRVSNMDGRLSNPDQSLTEDIVMFSASIAHLYSNLTKPILDVV
VTCYTLLRTAQSKGANTTWPSVIAGLVVALTAKVLRSCSPRFGKLVAEEAKRKGDLRHMH
SRIIANSEEIAFYGGHKVELAQLQRSYMSLSSQIHQILLKRLWYVMLEQFLMKYVWSASG
LVMVAVPIITATGYSKYDSDEVKQAAMVMKEEELVSERTQAFTTARNLLNAGADAVERIM
SSYKEVTELAGYTARVSEMLDVFEDVNQGIYRRSADREEALTTGAAGGAAVVQHGQRVCG
RLEIRGQVISVEHGIRCENLPIITPTGDVVVSSLNIQMDEGMHVLITGPNGCGKSSLFRI
LSGLWPVYGGVLYRPEPQHMFYIPQRPYMSEGTLRDQVIYPDSVEEMVQRGITDSDLEEI
LRTVHLVYILDREGGWESVSDWKDVLSGGEKQRMGMARMFYHRPRYALLDECTSAVSIDV
EGNIFQAAKDAGIALLSITHRPSLWKYHSHLLQFDGEGGWRFEPLDASTRLSLQEEKQRL
ESQLSGIPKMQQRLAELCVLLGERGGEAEGEDEEEALS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgacctatcagaagctgccggctgacctgaggcggagctccagactcaggaag
cttacggcagtgctgctcgcagcctacgccgtcaaaaaactgtccccgtatgtctggagg
aggatacagaggagtacagcaggtaaacagctgggtggagttaacctccctgtgggtgtg
gtcccctcgtcctccagctctgtggaaaacagcggagggaagaagaacagtgacagcagg
tctccatcagtgaacagggatttcgtccttaggctgtctcgtatgttgaagctcttgttt
ccacggttactgtgtccagagtttggtctattggctctgcactctgtcactctgatgtcc
aggaccttcctgtccatttacgtcgctgctctggacggtgcgatagtgaagtgtattgtt
cagaaggatcctcaggcctttgtgctgcagctctctaagtggctcctcgttgcagttccc
gccaccttcatcaacagcgccatcagattcctggagggtcagctgaccctcaggttccgg
agccgattggtcaaccacgcctaccagctgtacttcaccaaccagacttattaccgtgtc
agtaacatggacggtcgtctgtccaatcctgatcagtctctcactgaggacatcgtcatg
ttttcagcctccatcgcccatctctactccaacctgaccaaacccatcctggacgtggtc
gtcacctgctacaccctgctgcgcaccgcccagtctaaaggtgcaaacacaacatggccg
tcggtcatcgccggtctggtggtggcactcaccgccaaagtcctacgctcctgctcgcct
agatttgggaaactggtggccgaggaggcgaagaggaaaggagacctgagacacatgcac
tcacgcatcattgctaactctgaggagatcgcattctatggaggacacaaggtggagttg
gcccagctgcaaaggagctacatgtctctgtcgtctcagatccatcagatcctgctgaag
cgactctggtacgtcatgttggaacagttcctcatgaagtacgtttggagcgcctccggc
ctggtgatggtcgctgtgcccatcatcaccgctacaggttactccaaatacgactctgac
gaggtgaagcaggcagccatggtgatgaaggaagaggaattggtgagtgagaggacgcag
gccttcaccacggccagaaacctcctcaatgctggagccgacgctgtggagaggatcatg
agctcatacaaggaggtgacagagttagccggttacacagctcgggtgtctgagatgttg
gatgtgtttgaagatgtgaatcagggaatctaccgtcgctctgcagacagagaggaggcg
ttaacaacaggagcagcaggaggtgcagctgtggttcaacatggtcagagagtctgtggt
cgactggagatcagaggtcaggtgatcagtgtagagcacgggattcgctgtgagaacctg
ccaatcatcacaccgaccggagacgtggtggtgtccagcctcaacatccagatggatgag
gggatgcatgtgttgatcacaggtccaaacggctgtgggaagagttctctgttcaggatc
ctcagtggactgtggccagtttatggaggagtcctgtaccgcccagaaccacagcacatg
ttctacatcccacagaggccctacatgtcagaggggaccctcagggaccaggtgatttat
ccggactcagtggaggagatggttcagagggggatcactgattcggatctggaggagatc
cttcggaccgtccacctggtctacatcctggaccgagagggaggctgggagtcggtcagt
gactggaaagacgttctgtctggaggagagaaacagaggatggggatggctcgtatgttc
taccaccgccctcggtacgctctgttggatgagtgtacgagcgccgtcagcatcgacgtg
gaggggaacatcttccaggctgcaaaggatgcggggatagctctgctgtcaatcacacac
agaccctccctgtggaagtaccactctcacttgcttcagtttgatggagaaggaggatgg
aggtttgaacctctggatgcctccactcgtctctctctgcaggaggagaagcagcgtctg
gagagccagctgtcggggattcctaagatgcagcagagactggcagagctgtgtgtcctg
ctgggggagagagggggggaggcggagggggaggatgaagaggaggcgctctcctga
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