Xiphias gladius (swordfish): 120804141
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Entry
120804141 CDS
T07311
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00310
Lysine degradation
xgl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120804141 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120804141 (prdm16)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120804141 (prdm16)
Enzymes [BR:
xgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
120804141 (prdm16)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120804141 (prdm16)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120804141 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_11
zf-C2H2_jaz
zf-H2C2_5
zf-BED
zf-C2H2_8
C2CH-4th_BIRD-IDD
SET
Motif
Other DBs
NCBI-GeneID:
120804141
NCBI-ProteinID:
XP_040009306
LinkDB
All DBs
Position
LG18
Genome browser
AA seq
1229 aa
AA seq
DB search
MGNVKFALDTGPDATSNSWLKYVRSAASFEEQNLTACHLTGDQIYYKAVRDIEAGEELLV
YMKDGIFPEGSMAPNLQDEQMYRCEDCDELFSSTLELRRHQKYSCSSAGSIFDPLREDFK
QEREDSDEPVHECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKSNLIRHQMS
HDSGKRFECENCDKVQHTQHVFTDPSNLQRHIRSQHVGARAHTCPECGKTFATSSGLKQH
KHIHSSVKPFICPDGLRLFAPPGEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQLFS
TTSSLNKHRRFCEGKNHYGSPAGMFNPGIPMSSSPILAKAKSHHPHLPGLNQSGLGFTDY
FPSRPHPHAGLPFSPGPHGFPSLPHGFPGIFPPSLYPRPPLLPASPLIKSPLGGSSQEVK
LPRSPLDAPPLSLVSSTNSNGGNGLSQVEDKEKENKLDLSCSGEAKPKSKMADMSDGSDL
EDINTTSGTDLDTTTGTASGDGSDLESDGESERERSGKRRKPSGAISSQEGHQLEDTNSA
LIAAVSSSGNLTIDRPFISSATSQHSFFPPPDEQALPPTTTNANAATTDSIKAIASIAEK
YFGPGLIGLHQEKKMGPLPYHSMFPFQFLPNFHNSLYPFSADRGALNPSMFFKAEPKSPR
EQLHKIVSGAPGAPVSTAESPFDLTTKPKETKLALPTPTNPSNPNSSTGSSSGPLAISSG
EEQPLDLSIGSRSRGGHNGVAAEPQNRKNNIYGVGKGVSIKDETPAGFPQPHSQSLHQSS
IPQHQQPQAQPHQPPPLHYAKPSAFFMDPIYSRVEKRKLLDPVGALKEKFLRPSPPLFHP
QMSAMETMTEKLESFGALKLDPPPNSLQHSAHPLFNFRSPPPSLSDAILRKGKERYACRY
CGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNR
CFGQQTNLDRHLKKHEHENIPVSQQSGMLSNLGTTISSPNSEPDNHALLDEKEDSYFSEI
RNFISNSEMNQASSSMDKRSDQAEEERPPSHSLSNSKLGLQGLEEEEEEVEGDDEEEEEG
SLTEKSHDEAPESPSPVTTGVYEEDEEEEETETAPLAMSYEHTRRCIEEEGSLLDLEGLP
SFPKSLDGLRKAASDEQPFDVKDIFNTSLESEALKETLYRQAKTQAYAMMLSLSENNPLH
APSQNSLDAWLSMGGGPSETSSFHPLNHI
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgtcaagtttgcgctggacacaggcccagacgccacaagcaacagctggcta
aaatacgtccgctctgccgcgtcatttgaggagcagaacctcactgcctgtcacctcacc
ggagaccagatttattataaagctgtgcgggacattgaagcaggggaggagcttttagtg
tatatgaaggacggtattttccccgagggatccatggcacccaacctacaagacgagcag
atgtaccgctgtgaagactgtgatgagctgttctcctcaacgcttgagctacggcggcac
cagaagtattcgtgctccagtgccggctctatctttgacccactgagagaggacttcaag
caggagcgtgaggacagcgatgagcccgtccacgagtgtaaagactgtgagaagatcttc
ccaaacgagtacagtctgggccaacacatgatagtccatacagaggagagggaatacaag
tgtgaccagtgccccaaagccttcaactggaagtccaacctcatccgccaccagatgtca
catgacagtggcaagcgctttgagtgtgaaaactgtgataaggtacagcatacccagcac
gtgttcacagatcccagcaaccttcagcgccacatccgctcccaacacgtgggggcacgt
gctcacacatgtcctgagtgtggcaagacatttgccacctcatcaggcctcaagcagcat
aagcacatccacagcagtgtcaaaccctttatctgccctgatgggctgcgtctttttgct
cccccaggcgaggtgtgccacaaatcctacacccagttctccaacctctgccgacacaag
cgtatgcatgctgactgccgcacccagatcaagtgtaaggactgtgggcagttgttcagc
actacctcctccctcaacaagcaccgccgcttctgtgagggcaaaaaccattatggctct
cctgcagggatgttcaaccctggcatccccatgagctccagccccatcttggccaaggcc
aagtcccatcatccccaccttccaggtctaaaccagtcaggtttaggattcactgactac
tttccctcccgacctcaccctcatgctggcttgcccttctccccaggaccccatggtttc
ccatccctcccacatggtttcccaggtatcttccccccatcactgtatccacgaccacct
ttattgccggccagtccattgataaagagtccgctaggcggcagcagtcaggaggtgaag
ctgcctcggagtcccctagatgcacctccactgtccctggttagctcgacaaacagcaat
ggaggtaacggtttgagtcaggtggaagacaaagagaaagagaacaaactggatttgtct
tgtagtggagaagcaaagccaaaatccaaaatggcagacatgtctgatggaagtgatctt
gaagacattaataccacaagtgggacagatttagacaccaccactggaactgcttcaggt
gatggttctgacctggagagcgatggagagagtgaacgagagcgaagtggtaaaagaagg
aaaccatctggggccatttcaagtcaagaaggccaccagttagaagacacgaacagtgcg
ttgatagcagccgtgtctagttcggggaacctcaccattgatcgtccatttatctcttct
gcaacatcccagcactccttcttccctccacctgatgagcaagccctcccacccaccacc
acaaatgccaatgcagccaccacagattccatcaaagctatcgcttctattgcagagaaa
tattttggtccaggtttgattggtcttcatcaggagaagaaaatgggtccattgccctac
cattccatgtttcccttccagttcttgccaaacttccacaactccctctatcccttcagc
gctgatcgaggcgccctcaatcctagcatgttctttaaggcagagcccaagtcacctcgg
gagcagctgcacaagatagtttcaggtgccccaggggctcctgtttccacagcagagtca
ccatttgatctcaccacaaaacccaaggagaccaagttagctcttcccaccccaacaaat
ccctcaaaccccaacagtagtactgggagcagtagtggacctttagcaatatctagcggt
gaggagcagccattggacctcagcattggcagccgtagccgaggtggtcataatggtgtg
gcagctgagccacaaaatcgaaagaacaacatctatggagttggaaagggggtctccatc
aaggacgaaaccccagctgggtttccacagccccactcccagtcattgcaccaatcctcc
atcccccagcaccagcagccccaggcacagccacaccagccaccacccctgcactatgcc
aagccctcagcattcttcatggaccccatatacagcagggtggagaagaggaagctactt
gaccccgtaggtgctctgaaggaaaagttcctcaggccctcaccaccactctttcatcca
cagatgtcagccatggagaccatgacagagaagctggagagctttggcgctctaaaactt
gacccgccgcccaattcgctgcaacactcagctcatccgctgttcaacttccgctcaccc
ccaccttccctctcagacgccatcctccgcaagggcaaggagcgctacgcctgcaggtac
tgtgggaaaatcttccctcgttcggcaaacctcaccagacacttgcggactcacacgggg
gaacaaccctacaggtgtaaatactgtgaccgctcattcagcatctcatccaatcttcaa
cgccacgttcgcaacatccataacaaggagaaacccttcaagtgtcacttgtgcaaccgc
tgctttggtcagcaaaccaacctcgaccgccatctcaagaagcacgagcatgagaacatt
cctgtgagccaacagtccgggatgctttccaacctaggaaccaccatctcctcgccaaac
tccgagccagacaatcatgcacttttagatgagaaggaggactcgtacttctcagaaatc
cgcaacttcatttcaaacagtgagatgaaccaggcctccagctccatggataagagatca
gaccaggcggaggaggagcgcccaccaagccacagtttgtccaactccaagctagggctc
caggggctggaggaagaggaagaggaagtggaaggcgatgatgaggaggaggaggaaggc
agcctgacagagaagtctcatgatgaggcgcctgagtccccgtctcccgtcacaacagga
gtgtatgaagaggacgaggaagaggaggagacagagacagctccattggctatgagctat
gaacacactcgcaggtgtatagaggaggagggctctcttttggacttggagggcctgccc
agctttcccaagagcctggatgggttacgtaaagcagccagtgacgagcaaccttttgac
gttaaagacatatttaacacttcactagagtcggaggcactgaaagagacattgtacagg
caggctaaaacccaggcttatgcaatgatgctgtctctctcggagaacaaccctttgcac
gcgccctcccagaactctctggacgcttggctgagcatgggaggcggaccgtctgagacg
agcagctttcacccgctcaaccacatctag
DBGET
integrated database retrieval system
