Xiphias gladius (swordfish): 120804145
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Entry
120804145 CDS
T07311
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03250
Viral life cycle - HIV-1
xgl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120804145 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120804145 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120804145 (samhd1)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120804145 (samhd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
PDEase_I
SAM_TNK
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
120804145
NCBI-ProteinID:
XP_040009321
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All DBs
Position
LG18:17433406..17445665
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AA seq
634 aa
AA seq
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MENRKRPLEAVSSVNNSFKTPEKRMSAVRQQDSDYARWGVEETCQYLRREGLEKWENKFR
AQKITGVGLRYLKDSDLEKIGIEYLGDRLQILHSLSKLWQIEADPSKVFNDPIHGHMELH
PLLVKIIDTPQFQRLRNIKQLGGTYFVFPGASHNRFEHCIGVGYLAGQLVKALNERQPEL
FISRRDILCVQIAGLCHDLGHGPFSHMFDGLFIPQARPGITWKHEHASLAMFDYLVNDNG
LKPVMEQHGLVLPEDLEFIKEQIAGPLDTKATQAKKSSPQWPYKGRPEDKSFLYEIVANK
RNGIDVDKWDYFARDCYHLGVQNNFDHHRFLKFARVCEVDGQKHICTRDKEVANLYDMFH
TRNCLHRRAYQHKVGNIIATMITEAFLKADPYIQIQGSEGKIFTLSTAIDDMEAYTKLTD
HVFEEILHSSSAELAEARQILRNVVCRRLYKCLGQTQAAKPLSVTQDMINCWEADLAQST
PQIGAQDVSLQPEDFVVSVIFMDYGMQEKNPINNVRFYCKDDLTTAVQIRKDQVSKLLPE
QFAEQVIRVYCKKTDFKSLEAAKKHFVQWCMDKNFSKPQDGDIIAPELTPLKASWSNHNE
GEDCEAGGSREVNGVRANGKKKAKTQLFKQEEDR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcgaaaacgaccgttggaggcagtatcgagcgtgaacaacagctttaaaacg
ccggagaagagaatgtcagcggtccggcagcaggattcggactacgcgcgatggggtgtg
gaagaaacgtgtcagtacctgcgtagagaaggtcttgaaaaatgggaaaataaattcaga
gcacaaaaaataacgggtgtcgggctgagatatctcaaggattctgatctggagaagatt
ggcatagagtacctcggtgaccgtttgcagatcctacacagcctcagtaagctttggcag
atagaagctgatccaagcaaggtgtttaatgatcccatccacggacatatggagttacac
ccacttctcgtcaaaatcatagacacacctcagttccagcgactacgaaacatcaagcag
cttggggggacctactttgtttttcctggagcatcccacaaccgctttgaacactgcatt
ggggtgggttatttggcaggacaacttgtaaaagctctgaatgagaggcagccagaactc
ttcatctctcgccgagacatcctttgtgtgcagatcgctgggctctgccatgacttggga
catgggccattttcccatatgtttgatgggttgttcatcccccaagcacgtccaggaatt
acctggaagcatgagcatgcttctttagccatgtttgactacctggttaatgacaatggc
ttgaagccagtgatggagcagcatggcctggtgctgcctgaggacctggaatttattaag
gagcagattgccggaccactggacactaaagcaacccaagccaagaagtcatctccacag
tggccatataaaggccgtccagaagacaagtccttcctctatgaaatcgtggccaacaaa
agaaatggcattgatgtggataagtgggactactttgccagggactgctaccacttggga
gtccagaacaactttgaccatcaccgcttccttaagtttgccagggtgtgtgaggtggac
gggcagaagcacatttgtaccagagacaaggaggtggccaatctgtatgacatgttccac
acaaggaactgtctccacagaagagcctaccagcacaaagtgggcaacatcatagcgacc
atgatcacagaggcctttttaaaagcagatccatacatccagattcaaggctcagaaggg
aagatcttcactctctccacagccatagatgacatggaggcctacaccaagttgacagat
catgtgtttgaagaaatactccactcgtcctccgcagagctggctgaagcaaggcagatt
ctacgcaacgtcgtctgtcgacgcctctacaagtgtctaggccaaactcaggcagccaaa
cctttgagtgtcacccaggacatgattaactgctgggaagcagatttggctcagtccaca
cctcagattggcgcccaggacgtcagtctgcagccagaggactttgtagttagtgtcatt
tttatggactatggaatgcaggaaaagaaccccatcaacaatgtgcgtttctattgcaag
gatgacctaactacagccgtccagatacgcaaagaccaggtgtcaaaacttcttccagag
caatttgcagagcaggtgatcagggtctactgcaagaagacagattttaagagtctggag
gctgccaagaagcactttgtccagtggtgcatggacaagaacttctcaaagcctcaggat
ggagacataatagcacctgagctgacccctctgaaagccagctggtcgaaccacaatgaa
ggcgaggattgtgaagctggcggctccagagaagtaaatggtgttagagctaatgggaag
aaaaaagctaaaactcagctttttaagcaagaggaagaccgctaa
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