Xiphias gladius (swordfish): 120804207
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Entry
120804207 CDS
T07311
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2
KO
K06550
L1 cell adhesion molecule
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120804207 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120804207 (l1cama)
04090 CD molecules [BR:
xgl04090
]
120804207 (l1cama)
04091 Lectins [BR:
xgl04091
]
120804207 (l1cama)
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
L1 family
120804207 (l1cama)
CD molecules [BR:
xgl04090
]
Proteins
120804207 (l1cama)
Lectins [BR:
xgl04091
]
I-type lectins (Siglecs)
120804207 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Bravo_FIGEY
Pur_ac_phosph_N
C2-set_2
Ig_5
Sp38
V-set_CD47
Ig_C17orf99
Herpes_gE_N
SusE
Ig_J
DUF4998
Motif
Other DBs
NCBI-GeneID:
120804207
NCBI-ProteinID:
XP_040009421
LinkDB
All DBs
Position
LG18:14686355..14737765
Genome browser
AA seq
1277 aa
AA seq
DB search
MPHTQRQQVGSRGQCSSRLLPLLLLLLAAQPSQAAIHIPSNFKRPPVITTQPESVTVFSV
EDLVMSCEASGNPAPIFRWTKDGEEFNPGSDPELKVSEHTGSYVFYTLSNTMDTLKQYQG
KYVCYASNELGTAVSNEAILSTDVPPTQQKEKKVNVKSEQGSSIVLKCNPPQSSMEPIIH
WMDWSLTHIQLSQRVMVGKDGNLYFAHLTIEDSRDDYTCNVQYLATRTILAKEPITLTVT
PSNSVVRNKRPQMMRPTGSHSTYHALRGQTVELECIVQGLPTPDVLWLRKDGELSKTRTT
KDMSDRRLRFTNISESDGGEYQCRANNSQGKITHTYTVIVEAAPYWTKEPVSQLYAPGET
VKLDCQADGIPSPTISWTINGIPLSATDEDFRRIVTTSGSLIINDVNFGDTAIYQCRASN
THGTILTNTNVYVIELPPQILTEDRTTYTFTEGQKALLECETFGSPKPKVIWESGSASSL
MADPRVNPLTNGGLEISNVTHEDEGLYTCSVQNTNFSISADLEVLNRTVILSPPQALKVQ
PRNTAIFTCLALVDPKLGSPLIQWRKNNQKLFESHSDEKYTFEGPDLIIANVEPDDEGVY
TCQVITKLDMAEASGTLTLCDRPDPPVLLQITDPKHRAVTLSWTPGDDHNSAVLEYVVEF
EDQGSKEMGWKEVKRVGGNKERASLPLWPYMSYRFRVIAINDVGKSDPSKPSEIHNTPAE
APDNNPEDIRSESIDPDTLVITWEEMDKHNFNGPDFKYRVLWRRVVGSGPNWHMNYTTTP
PFIVNDVGNFSAFEIKVQAVNEKGEGPEPDPVIGYSGEDVPLEAPMDVGVVLINSTTIKV
TWAGVDREMVRGHLLGYKIYLTRTGSRGHHRGRRAKESESTMVVETGATEEQKVISDLRP
YSHYTLAVTVFNSKGEGPASETLSFKTHEGVPGPPSSLMLDSPSETEMTLHWMPPAQPNG
VLIGYLLQYQRIVESDDSPMQVETIDDPTVTHLTLKSLDHHSHYRFYLRGRTAAGDGEPI
MRAGATTLDGEPPANINLSVGENSVNLSWVAKKRHRNLSFQIHYLKKDDGSKWKKTERVN
SSQSFYQLQGLTPGSHYHLRFTYSNTTFFETDIETEGTGVTEVQPSFATQGWFIGIVSAI
VLLLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESDLEEKRTAS
QPSLCEESKLCSEDNLDFNGSSAITTELNMDESLVSQFSRPSEGPEAIHSLPDNSPLNPT
PVSPATNGIPTSVTILD
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacgcagcgacagcaggttggcagtagggggcagtgctcctcccgcctcctc
cccctcctcctcctcctccttgctgcccagcccagccaagcagccatacacataccctcc
aacttcaagaggcctcccgtgatcaccacgcagccagagtctgtcactgtctttagtgtt
gaagacctcgtcatgagctgtgaagcctccggcaaccctgcgcccattttccgatggaca
aaggatggagaggagtttaacccaggcagtgacccagagctgaaggtttcagagcacacc
ggctcatatgtattctacacactcagtaatactatggacaccctgaagcagtaccaaggc
aaatatgtctgctacgcatccaacgagctggggactgccgtatctaatgaggccatactc
agcactgatgttcccccaacccagcagaaagaaaaaaaggttaatgtgaagtctgaacag
ggaagcagtattgttctgaagtgtaaccccccacagagctctatggagcctatcattcac
tggatggactggagcctaacacatatccagctcagtcagcgagtgatggtggggaaggat
ggcaacctatactttgcccatttgacaatcgaggacagcagggatgactacacctgcaat
gtccagtacctggcaacacgcaccattcttgcaaaggaacccatcactctgaccgtcacc
ccctccaactcagtagtacgtaacaagcgtccccagatgatgagacctactggaagtcac
agcacctaccacgccctcaggggccagaccgtggagcttgagtgcatcgtccaaggcctt
ccaactcctgacgtgttgtggctgaggaaagatggcgagctgtccaaaactcgaactacg
aaagatatgtccgaccgccgcctacgcttcactaatatctccgagagtgacgggggcgag
taccagtgtagagctaacaactcccaaggaaagatcacacacacttacactgtgattgtg
gaagctgctccctactggactaaggagccagtcagtcagttgtatgcaccaggtgagact
gtcaaactagactgccaggcagatggcatcccctctcctaccatcagctggaccatcaat
gggattcctctctcagcaaccgatgaggactttagacgcatcgtgacaacaagtggatct
ctaatcataaatgatgtcaactttggagacactgccatataccagtgtcgggcctccaac
acgcatggaaccatcctcaccaacaccaacgtttatgtcattgagctgcctccacagatc
cttactgaggacaggactacatacacatttacagagggccagaaggccttactggagtgt
gagacctttggttctcctaaacctaaagtcatatgggagagtggcagcgcctcctcactt
atggcagatcccagagttaacccactcaccaatgggggtcttgagatttctaatgtcacc
catgaagatgagggcttgtacacctgctctgtccagaacaccaacttttcaatcagtgca
gatcttgaagtgctcaacaggacagtgatcctgtcgccacctcaggctctgaaggtgcaa
cctagaaacacagcaatcttcacctgtctggccctagttgaccccaaactcggctctcca
ctcattcagtggagaaagaacaatcagaagctgtttgagtcccacagtgacgaaaaatat
acatttgaaggaccagacctaataatagctaatgtggaaccagatgatgagggtgtgtac
acctgtcaggtcatcactaagctggacatggctgaagccagtggcaccctcactttatgt
gatcgtccagaccctcctgtcctcctccagatcactgatcctaagcatcgtgcagtcacc
ctcagctggactcctggagacgaccacaacagcgctgtgctagagtatgtggttgagttt
gaagaccaaggttcgaaggagatgggttggaaagaggtaaagagagtaggagggaacaag
gagcgtgctagcctccctctgtggccctacatgtcctaccgtttccgggttattgccatc
aatgatgtgggcaagagcgaccccagcaagccatctgaaatccacaacacacctgcagaa
gctccagacaataaccctgaagatattaggagtgagtccatagacccagacactctggtc
atcacctgggaggaaatggacaaacacaacttcaatggacctgacttcaagtacagggtg
ctgtggaggcgagtggtgggcagtgggcccaactggcacatgaactacacaactacacca
ccattcattgtcaatgatgttggcaacttttctgcctttgagatcaaagttcaggctgtc
aatgagaaaggggagggacctgagccagaccctgtcattgggtactcaggagaagatgtt
ccattggaggctccaatggatgtgggtgttgtactaattaacagcactaccatcaaagtg
acctgggcaggagtagacagagagatggtcagaggacacctgctgggatacaagatctac
ttgaccaggactggttctaggggccaccacagaggccggagggccaaggagtcagaaagc
actatggtggtggagactggagccactgaagagcagaaggtgatcagtgatctcagaccg
tactcccactataccctggccgtcactgttttcaacagcaagggcgagggacctgcatct
gagacgctgtccttcaagactcatgagggagttcctggtcctccctcgtccctgatgctg
gacagcccatcagagacagagatgaccctccactggatgcctcctgcccagcctaatgga
gtcctcattggatatctactgcaataccaacggattgtggagagtgatgacagccccatg
caggtagagacaatagacgatcccaccgtcacccacctcaccctcaagagcctggaccat
cacagccactaccgcttctacctgagggggcgcactgctgctggtgacggagagcccatc
atgagggcgggtgccaccacgctggatggagagcctcctgctaacatcaacctgtctgtg
ggggaaaactcagttaacctcagctgggtggccaaaaagagacacaggaatcttagcttt
cagatccactacctcaaaaaagatgatggcagcaaatggaagaagacagagagggtgaac
tcctctcagtctttctaccagctccagggcctgactcctggctctcattatcatctgcgc
ttcacctatagcaacaccaccttcttcgagactgacattgagacagaaggaacaggagtg
acggaggtgcagccaagctttgcaacacagggctggttcattggcattgtgagtgccatc
gttctgctactgctgatactgctcatcctctgcttcatcaagaggagtaaaggtggaaag
tactcagtgaaagataaagaagagggtccgatggactcagaggctagacctatgaaagac
gagacttttggagagtacagatctctagaaagtgatcttgaggagaagcgcacggccagc
cagccgtccctgtgcgaggagagcaagctgtgcagcgaggacaaccttgacttcaacggc
agcagtgccataaccacggagctcaacatggatgagtctctggtcagccagttcagtcgg
cccagcgagggtccagaggcgatccatagcctgccagacaactccccgctcaaccccaca
cctgtctccccagccaccaatggcatacccacctcagtcaccattctcgattaa
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