Xiphias gladius (swordfish): 120804224 Help Entry 120804224         CDS       T07311                                  Symbol prpf6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism xgl  Xiphias gladius (swordfish) Pathway xgl03040   Spliceosome Brite KEGG Orthology (KO) [BR:xgl00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120804224 (prpf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:xgl03041]     120804224 (prpf6) Spliceosome [BR:xgl03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     120804224 (prpf6)  Complex C    U5 SnRNP specific factors     120804224 (prpf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf TPR_16 HAT_Syf1_CNRKL1_C HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_2 TPR_17 TPR_8 TPR_1 FAT TPR_CcmH_CycH ARM_TT21_N ARM_TT21_C T7SS_EccA1_N ARM_TT21_5th Mt_ATP-synt_B Motif Other DBs NCBI-GeneID:  120804224 NCBI-ProteinID:  XP_040009469 LinkDB All DBs Position LG18:complement(18173393..18185743) Genome browser AA seq 969 aa AA seqDB search MASAAAKQAPKITPKTSAGGTGAAGVSGGPPIMPLASPLMGKKKKPFLGMPAPLGYVPGL GRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQDDDDEDLNDTNYDEFNG YAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERRELREKEEIEKYRMERPKIQQQFS DLKRKLAEVSEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFSKHLQTGENHTTVDPL QGLGGLNTPYPGSMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSGQTVVDPKG YLTDLNSMIPTHGGDISDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI MKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDVRAKKRV LRKALENVSKSVRLWKTAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENARRV LNKARENIPTDRHIWITAAKLEEANGNTQMVDKIIDRAITSLHANGVEINREQWIQDAEE CDKAGSVATCQAVIRAVIGIGIEEEDRKHTWMEDAESCVAHGALECARAIYAHALQVFPS KKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAEDVPAARSILA LAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIE AAQELCTEALKHYEDFPKLWMMRGQIEEQCENMDKAREAYNQGLKKCPHSVPLWLLLSHL EERVGQLTRARAILEKARLKNPQSPELWLESVRLEFRAGLKNIANTLMAKALQECPNSGI LWAEAVFLEARPQRKTKSVDALKKCEHDPHVLLGVAKLFWSERKITKAREWFLRTVKIEP DLGDAWALFYKFELQHGTEEQQEEVRKRCENVEPRHGELWCAESKHVLNWQKKTGEILAL VASKIKNTF NT seq 2910 nt NT seq  +upstreamnt  +downstreamnt atggcaagcgctgctgctaaacaagcgcctaaaattacccccaaaacatccgcgggaggc accggggcagcgggggttagcggtgggcccccaataatgcccctcgcctcgccgctcatg gggaaaaagaagaagccgttcctggggatgcccgctccgctgggctacgtccccggtctc ggcagaggtgcaactggtttcaccactcgatctgatattggtcctgctcgagatgccaat gatccagtggatgaccgacatgcacccccagggaagaggacggttggggaccaaatgaag aagaaccaggacgatgatgatgaagatctgaacgacaccaactatgatgagtttaatgga tatgcaggtagcttgttttccagcgggccctatgagaaagacgatgaagaagcagatgct atatatgcagcactggacaagaggatggatgaaagacgcaaagaaagaagggagctgaga gaaaaggaagaaattgagaaatatcgtatggagcgacccaaaatccagcagcagttttca gatcttaagaggaagttggcagaggtgtcagaggaggagtggctgagcatccctgaagtg ggagatgcaaggaacaagcgccaaaggaatccacgctatgaaaaactcacgcctgtccct gacagcttcttctccaaacacctgcagaccggagagaaccacaccaccgtggaccctctg caagggctgggaggtctgaacaccccttacccaggaagtatgacacctggtctgatgacg ccaggaacaggagagctggacatgaggaaaatcggtcaggccaggaacacactcatggat atgaggctcagtcaggtatctgactcagtgagcggacagacagtggtggatcctaagggt tacctgacagatctcaactctatgatccccacacatggaggagacatcagtgatatcaag aaggctcgtctgctgctgaaatcagtgagggagaccaatccccatcacccacctgcctgg attgcctctgccaggctggaggaggtaactggcaaactgcaggtggcaaggaacctgatc atgaaaggcaccgagatgtgtcctaagagcgaggatgtatggctggaggcagctcgactc cagcctggggacacagccaaggccgtggtagcccaggctgtccgccacctgccgcagtcc gtccgtatctacatcagagctgcagagctggagacagatgtcagggccaagaaacgagtc ctcaggaaggccctggagaatgtgtccaagtcagttcgactgtggaagacagctgttgag ctggaagagccagaggatgccaggatcatgcttagccgagctgtggagtgttgccctact agtgtcgagctgtggctggcactggcccggctagaaacgtatgagaatgctcgtcgtgtc ttgaacaaagctcgagagaacattcccactgatcgtcacatctggatcactgctgccaag ttggaggaggccaatggcaacactcagatggtggacaagatcattgacagagccatcact tcactacatgccaacggtgtggagatcaacagagagcagtggatacaggatgcagaggag tgtgacaaagccggcagtgtggctacctgccaggctgtgataagggcggtcatagggatt ggcatcgaggaggaggaccgtaaacacacctggatggaggatgcagagagttgtgtggcc catggagcgctggagtgtgcccgggccatctatgcccacgctctgcaggtgtttcccagt aaaaaaagtgtctggcttagagctgcatactttgagaagaaccatggaaccagggaatct ttggaggccctgctccagagggctgtggctcactgccccaaggcagaggtcctgtggctg atgggagccaagtccaagtggctggctgaggatgtgcctgcagccagaagtatcctcgct ctggccttccaggctaacccaaacagtgaagagatctggcttgctgctgtgaaactggag tctgagaataatgagtatgaaagagcccgtcgactgctggccaaggcccgcagcagtgcc ccaacagccagggtatttatgaagtcagtgaagttggagtgggtgttgggaaacatagaa gctgcccaggagttgtgcaccgaggccctgaaacactatgaggacttcccaaaactttgg atgatgagaggccagatagaggagcagtgtgaaaacatggacaaggcaagagaggcctac aaccaagggttgaaaaagtgtccccactcggtgcccctgtggttgttgctgtctcatctt gaagagagagtggggcagctgactagagccagagcaatcctggagaaggcacgactcaag aacccccagagccctgagctatggttggagtcagtcagactggagttcagggctggactg aagaacattgccaacacactgatggccaaagccctgcaggagtgccccaattcaggtatc ctgtgggctgaggctgtgtttttggaggccaggccccagaggaagactaagagtgtggat gctttgaagaagtgtgaacatgacccccacgtcttgctcggtgtcgccaagttgttttgg agtgagcgtaagatcaccaaagccagagagtggttcctcaggacggtaaagattgagcca gacctaggagatgcttgggctctcttctacaagtttgagctgcaacatggcacagaggaa cagcaggaagaggtgcgaaagcgctgtgagaatgtggagccccgccatggagagctgtgg tgtgccgagtccaaacatgtcctgaactggcagaagaagacaggagagatcttagcactg gtagccagcaagatcaagaacacattctga

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