Xiphias gladius (swordfish): 120804331
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Entry
120804331 CDS
T07311
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120804331 (apex2)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120804331 (apex2)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120804331 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
120804331
NCBI-ProteinID:
XP_040009658
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Position
LG18:22991292..22997027
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AA seq
576 aa
AA seq
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MKIVTWNINGIRTFRGGIKKALDSLDADIICIQETKVTRDLLDERTAIVDGYNSYFSYSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHEGAVGCYGDPTEFSSEELQLLDNEGRAI
ITQHRIMCQDKVQTVTVINVYCPRADPEKPERKQFKLQFYKLLQCRAEAILKDGSHVIVL
GDVNTSHRPIDHCDPSDIDGFDENPGRKWLNVFLHSGKLEEDRNDEEPDEESEVASTDPI
YGGKFVDTFRYFHPTRKNAFTCWSTLTGARQTNYGTRIDYIIADCQLAKEQFVAADIMPE
VEGSDHCPVWGRLSCPLLPSSKPPPLCTRYLPEFAGKQQKLSRFLVKVDQRSVQAEQRGA
LPGSQEEEERRENLNPFGAGNVSGKKRVLTSDSVVPKGKKTKTVKTSSKPQGSLLSFFKP
KLTNVGPPTEAPVGQCEKPPDLDEMSPTQNSLKVSSVTDKVPEHTAPLFDGSKQMCTSGT
TEKYDKQMKAKHSTAQSTVGRSNANKGASFVFWKSVLHGPPPPPSCKVHGEPCVLRTVKK
EGPNMGKQFFVCARPQGHASNPEARCSFFAWVDKGK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttacctggaacataaatggcataaggactttcagaggcggcattaaaaag
gctcttgattcactagacgcagatattatctgcattcaggagacaaaagtgacaagagac
ctgcttgatgagagaactgcaattgttgacggctacaactcctatttcagttacagtcga
ggacgcagcggctattcaggggtcgccacttactgtaaggacagtgccacgccttttgct
gctgaggagggtctcacaggtctgctgaccaaccacgagggggctgttggatgctacggt
gatcccaccgagttttcaagtgaggagctacagcttttggacaatgaaggacgagccatc
atcacgcagcacagaataatgtgtcaggacaaagtgcaaactgttactgtaatcaatgta
tactgtccacgggctgaccccgaaaagccagagcgaaaacagttcaaactgcagttctac
aaattgcttcagtgtcgggctgaagctatactgaaagatggcagccatgtgattgtttta
ggagatgtaaatacatctcaccggccaatagaccactgcgaccccagtgatattgatggt
ttcgatgaaaaccctggaagaaaatggctgaatgtttttttgcacagtggcaaactagaa
gaggacaggaatgatgaggaacccgatgaagaatctgaggtagcttcaacagatcccatc
tacggtggaaaatttgtggatacctttcgctatttccacccaactcgaaaaaatgccttc
acatgctggtccactctcactggagcacggcagaccaactatggcacacgcattgactat
ataatcgctgattgccagctagccaaggagcagtttgtggcggcagacatcatgccagag
gtggaggggtcagaccactgtcctgtatgggggcgactgagctgccctctcctgcccagc
tctaagcctcctcccctttgcactcgctacctgccggagtttgctggcaagcagcagaaa
ctctcccgcttccttgttaaagtggaccaaagatcagttcaggctgagcagaggggtgca
ttacctggatctcaagaggaggaggaaaggagggagaatttaaacccattcggtgctgga
aacgtctctggtaaaaaacgggtattaacatcggattctgttgtcccaaaagggaagaag
acaaagacagtaaagacttcttcaaagccacaaggcagcctcctttcctttttcaaacct
aaactcacaaatgttggtcctcccactgaagcccctgtcgggcagtgtgaaaaaccaccc
gacctggatgaaatgtccccaacacaaaactctctaaaagtgtcgtcagttacagacaag
gtacctgaacatacagcgcctttatttgatggttccaaacagatgtgtaccagtggcacc
acagagaaatatgacaaacagatgaaggcaaaacattcgaccgcacagtccactgtggga
cgctcaaatgccaacaaaggggcatcatttgtcttttggaagtcagtgcttcatggaccg
cctccaccaccctcctgtaaggtccacggggaaccctgcgtgctgcgtactgtaaaaaaa
gaggggccaaacatgggcaaacagttctttgtttgtgcccgtcctcagggacatgcctcc
aaccctgaggctcgatgcagtttctttgcatgggttgacaaggggaagtga
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