Xiphias gladius (swordfish): 120804434
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Entry
120804434 CDS
T07311
Symbol
trim101
Name
(RefSeq) tripartite motif containing 101 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120804434 (trim101)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120804434 (trim101)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120804434 (trim101)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-RING_6
Sina_RING
Motif
Other DBs
NCBI-GeneID:
120804434
NCBI-ProteinID:
XP_040009821
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Position
LG18:27660428..27679135
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AA seq
526 aa
AA seq
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MQRKVSKQEEVKLGGAATSPPADLSCLRGGGGADREAGLATLEKQLICPICLELFSKPVV
ILPCQHNLCRKCANELYQPSLFQARTTMLVSSGRFRCPSCRHEVVLDRHGVYGLQRNLLV
ENIIDVYKQEVSSSNNSTSPLPLPPHPAKLMCPDHEGEKVNIYCRTCQVPTCSLCKVFGA
HQSCQVAPLTDIYQQQKAELSEGVSSLVAVNGKIQALISELEQTCRNIEEDCKTRKQSVC
DKFDGMFSILGERHKAMTQRISSEQDEKTGRARALVRCYGDSMEANAKLMERALSGMEEP
DMAAFVQNSRELITKVIAAATSGPAETLKPGYENMSHYKFNFSRQERALRSIDFIKAVED
VPEEPEAEPEPEEPKEASVQNTEPEHHQETSIQNLESVVEPVIETIPALISPPGEPVQTA
APTPTLIPPAPGLLRDSVEAEGADLQPATDDADLNDEGSGPIKNKEEEEEEEAEGCAAPD
SVKEVNICEPQEGMSTQQAVTLLFYLLAFLVILQRVWSYIGCFICT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaaggtaagtaaacaggaggaggtgaagcttggcggcgcagccacgtcgccg
ccggccgacctgagctgcctgcggggcggcgggggagcggaccgcgaggcggggctggcg
acgctggagaaacagctcatctgcccgatctgcctggagctgttcagcaaaccggtggtc
atcctgccctgccagcacaacctctgcaggaagtgtgccaacgagctctaccagccctcc
ctgttccaggctcggaccaccatgctggtgagcagcggccgtttccgctgtccgtcctgc
agacatgaggtggtgctcgaccgccacggcgtctacggccttcagcgaaacctgctggtg
gagaacatcattgacgtctacaagcaggaagtcagcagcagcaacaatagcacaagcccc
ctgccgcttcctccacatcccgctaagctgatgtgtccggaccacgagggggagaaggtg
aacatctactgtcgcacctgtcaggtccccacctgttccctctgcaaggtgttcggggct
catcagtcctgtcaggtggctcctctgacagacatctaccagcagcagaaggcggagctg
agcgaaggagtcagttcgctggtggctgtcaacggtaaaatccaggcgttgatcagtgag
ctggagcagacctgcagaaacatagaggaggactgtaagacccggaaacagagcgtgtgc
gacaagttcgacggcatgttttccatcctgggggagagacacaaggcgatgacacagcga
atcagctccgagcaggacgagaagacgggccgcgcccgggcgctggtgcgttgctatgga
gacagcatggaggccaacgccaaactgatggagagggcgttgagcggcatggaggagccg
gacatggctgctttcgtccagaattcaagagagctgatcacaaaagtcatagcagcggcc
acctccggtccggctgagacgctgaagcctggttatgagaatatgagccactacaaattt
aactttagccgacaggagagagccctgaggagcatagactttattaaagctgtggaggat
gttcctgaagaaccagaggctgaaccagagccagaggaacccaaagaggcctctgtccag
aacactgaaccagagcaccaccaggaaacctccatccagaacctggagtctgttgtagaa
ccagttatagagacaatcccagcactgatatcacccccaggggaaccagtacagacagca
gcaccaacaccaaccctgattccaccagctccaggactgttgagagactccgtggaagct
gaaggggcagatctgcagccagcgaccgacgacgcagacctgaatgatgaaggatcgggt
ccgattaagaacaaggaggaggaggaggaagaggaggccgagggatgtgcagctcctgac
tctgttaaagaggtgaacatctgtgaaccccaggagggaatgagcacacaacaggccgtc
actctgctcttctacctgttggccttcctggtcatcctgcagagggtttggtcttacatc
ggctgcttcatttgcacataa
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