Xiphias gladius (swordfish): 120804525
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Entry
120804525 CDS
T07311
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120804525 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120804525 (xpc)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120804525 (xpc)
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Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
120804525
NCBI-ProteinID:
XP_040009958
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Position
LG18:9469599..9483192
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AA seq
821 aa
AA seq
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MAKRRERAETGADTKRPRQVKSGAAKARAKTKDAGNVITEKEEKLERKVKPKSRLPSKPA
AKNNSSSKSTTATAVKTSKYFQSPVKEEEIDSEDDFDMVTSPARLVTVKTKKPEKKEEEE
EEEEEEEENYLSGLLKWFRATFTLNPSLPCEERPDPRALLERRLASLSARNHQEMTHLFL
LVLRSLQLFSRLVLSLQPIPFKAPSAKCERAGISTGAPGKSHKNQETLKNTSPEQKVSPG
TKRPAGEGKAKQDRGGKKAKRKEIKEEDEEEKAITSGGQRPKNSKRRSVASKVSYKEESN
SEGEEGLRDEEEFQVTSEGESEDSESEAKSTKGRNKRGKSKAKAINNKNTGAPKRRSGGG
QKEGKDEGDKKWEEGEDDDDEDGEGTTNNGIKRRSGKKKGPGADEWLEVYLVKTSSWVCV
DVEHGVGMPHLCSQNATVPVTYVVSVDGDGFVKDLGKKYDPTWMTSSRKRRVDEDWWEET
LEPFLGPEDERDKKEDKELQNKLLNKPLPISIAEYKNHPLYALKRHLLKYEAIYPPTATV
LGYCRGEPVYSRDCVHTLHSRDTWLKEARTVRIGEEPFKMVKGFSNRSRKARMMSELKDE
NDLPLFGEWQTEEYQPPIAVDGKVPRNDYGNVYLFKPCMLPVGCVHLRLPNLHRVARKLN
VDAATAVTGFDFHGGYSHAVTDGYIVCEEHEEILRAAWVEEQELQKQREKEKKEKRVISN
WTLLVKGLLIRERLKQRYGKKNQGLGNLAHGDDTGGLSSDEEAVEGGSPEAKTASETLAM
SWPQNRQAEEDGGNASGLKKKLTTKRQKRGQEKQLFPFEKV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcggagagagcgcgcagagacaggggccgatacaaagagaccgaggcaggtg
aagagcggcgcagcgaaagcaagagcaaagacgaaagatgcaggtaatgtcatcacagag
aaagaggagaagctcgagaggaaggttaaacccaagtcacgtttgccatcaaaaccagca
gcaaagaacaactcttcttccaaatccaccaccgccactgctgtcaaaaccagtaaatac
ttccagtcaccagtgaaggaggaggagattgacagtgaagacgactttgacatggtaacc
tcaccagcacgtctggttacggtgaaaaccaagaaaccagagaaaaaagaagaagaggag
gaggaggaggaggaggaggaggagaactacctctctggactactcaagtggtttagagca
acgttcaccctcaaccccagtcttccatgtgaggagcgtccagacccccgggctctcctg
gagaggcggctggccagcctctcagccaggaaccaccaggagatgactcatctgttcctg
ttggtcttgaggtctctgcagctcttctcccgattggttctttccctacagccgattcct
ttcaaagccccatcagccaagtgcgaaagggctggaatatctaccggtgccccaggaaag
agccacaaaaaccaagaaaccttaaagaacacctctcctgagcagaaggtctctcctggc
accaagagaccagctggagaggggaaagcaaagcaagacagaggaggaaagaaagcaaag
agaaaagaaataaaagaggaggacgaagaggagaaggctataacatcaggagggcagaga
ccaaagaactcaaaacgccgcagtgtagcctcaaaggtaagctacaaggaggagagcaac
agcgaaggggaagaggggcttagagatgaggaagaatttcaagtgaccagtgagggggag
agtgaggattcagagagtgaggctaaatccacaaagggaaggaacaagagggggaagagc
aaagctaaagcgatcaacaacaagaacacaggagctccgaagagaaggagtggtggaggg
caaaaagagggaaaagacgagggagacaaaaagtgggaggaaggagaggacgatgatgat
gaagatggagaaggaacaacgaataacggaataaaacgaaggagcgggaagaagaagggg
cctggagctgatgagtggttggaggtctatttggtaaaaacgtcttcctgggtttgcgtg
gatgttgagcacggtgtcgggatgccccacctctgctcccagaatgcaacagtgccggtg
acatacgtggtgtcagtggacggggatggatttgtgaaggacctaggaaagaaatacgac
cccacctggatgacatcttccaggaagaggcgggtggatgaggactggtgggaggaaacg
ctcgagccattcctgggacccgaggatgagagggacaaaaaggaggataaggagctccag
aataagcttctgaacaaacccctgccgatctctatagcggagtataagaaccacccactg
tacgccttaaagagacacctgctgaagtatgaagccatctatcctccaacagccaccgta
ctgggatactgcagaggagagccggtatattccagggattgcgtgcacaccctccactcc
cgagacacatggctgaaagaagcacgaacagtcagaataggagaagagccattcaaaatg
gtgaagggcttctctaatcgttcccgtaaggccaggatgatgtctgagctgaaggatgaa
aatgacctgcctctgtttggagaatggcagactgaagagtaccaaccgcctatagccgtg
gacgggaaggttccccgtaacgactacggtaacgtgtacctgttcaagccctgtatgtta
ccggtgggctgtgttcacctcaggctgcccaacctgcaccgcgtggccaggaagctgaac
gtcgacgccgccactgcggtcacaggctttgacttccatggaggatactcgcacgctgtg
actgacggttacattgtgtgtgaggagcatgaagagattctcagagctgcctgggtggag
gaacaagagctgcagaaacaaagggagaaagagaaaaaagaaaagagggtgatctccaac
tggactctgctggtgaaaggactcctgatcagagagaggcttaaacagcgctacggcaag
aagaaccaggggttggggaaccttgctcatggagacgacaccggtgggctttcatctgat
gaggaggcggttgagggtggaagtcctgaagctaagactgcatctgaaactctggccatg
tcctggcctcaaaacagacaagcagaggaggacggagggaacgccagcggactgaagaaa
aagttgacaacaaaacgacagaagagagggcaagagaaacaattgttcccctttgagaaa
gtataa
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