KEGG   Xiphias gladius (swordfish): 120804525
Entry
120804525         CDS       T07311                                 
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    120804525 (xpc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120804525 (xpc)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      120804525 (xpc)
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2
Other DBs
NCBI-GeneID: 120804525
NCBI-ProteinID: XP_040009958
LinkDB
Position
LG18:9469599..9483192
AA seq 821 aa
MAKRRERAETGADTKRPRQVKSGAAKARAKTKDAGNVITEKEEKLERKVKPKSRLPSKPA
AKNNSSSKSTTATAVKTSKYFQSPVKEEEIDSEDDFDMVTSPARLVTVKTKKPEKKEEEE
EEEEEEEENYLSGLLKWFRATFTLNPSLPCEERPDPRALLERRLASLSARNHQEMTHLFL
LVLRSLQLFSRLVLSLQPIPFKAPSAKCERAGISTGAPGKSHKNQETLKNTSPEQKVSPG
TKRPAGEGKAKQDRGGKKAKRKEIKEEDEEEKAITSGGQRPKNSKRRSVASKVSYKEESN
SEGEEGLRDEEEFQVTSEGESEDSESEAKSTKGRNKRGKSKAKAINNKNTGAPKRRSGGG
QKEGKDEGDKKWEEGEDDDDEDGEGTTNNGIKRRSGKKKGPGADEWLEVYLVKTSSWVCV
DVEHGVGMPHLCSQNATVPVTYVVSVDGDGFVKDLGKKYDPTWMTSSRKRRVDEDWWEET
LEPFLGPEDERDKKEDKELQNKLLNKPLPISIAEYKNHPLYALKRHLLKYEAIYPPTATV
LGYCRGEPVYSRDCVHTLHSRDTWLKEARTVRIGEEPFKMVKGFSNRSRKARMMSELKDE
NDLPLFGEWQTEEYQPPIAVDGKVPRNDYGNVYLFKPCMLPVGCVHLRLPNLHRVARKLN
VDAATAVTGFDFHGGYSHAVTDGYIVCEEHEEILRAAWVEEQELQKQREKEKKEKRVISN
WTLLVKGLLIRERLKQRYGKKNQGLGNLAHGDDTGGLSSDEEAVEGGSPEAKTASETLAM
SWPQNRQAEEDGGNASGLKKKLTTKRQKRGQEKQLFPFEKV
NT seq 2466 nt   +upstreamnt  +downstreamnt
atggcaaagcggagagagcgcgcagagacaggggccgatacaaagagaccgaggcaggtg
aagagcggcgcagcgaaagcaagagcaaagacgaaagatgcaggtaatgtcatcacagag
aaagaggagaagctcgagaggaaggttaaacccaagtcacgtttgccatcaaaaccagca
gcaaagaacaactcttcttccaaatccaccaccgccactgctgtcaaaaccagtaaatac
ttccagtcaccagtgaaggaggaggagattgacagtgaagacgactttgacatggtaacc
tcaccagcacgtctggttacggtgaaaaccaagaaaccagagaaaaaagaagaagaggag
gaggaggaggaggaggaggaggagaactacctctctggactactcaagtggtttagagca
acgttcaccctcaaccccagtcttccatgtgaggagcgtccagacccccgggctctcctg
gagaggcggctggccagcctctcagccaggaaccaccaggagatgactcatctgttcctg
ttggtcttgaggtctctgcagctcttctcccgattggttctttccctacagccgattcct
ttcaaagccccatcagccaagtgcgaaagggctggaatatctaccggtgccccaggaaag
agccacaaaaaccaagaaaccttaaagaacacctctcctgagcagaaggtctctcctggc
accaagagaccagctggagaggggaaagcaaagcaagacagaggaggaaagaaagcaaag
agaaaagaaataaaagaggaggacgaagaggagaaggctataacatcaggagggcagaga
ccaaagaactcaaaacgccgcagtgtagcctcaaaggtaagctacaaggaggagagcaac
agcgaaggggaagaggggcttagagatgaggaagaatttcaagtgaccagtgagggggag
agtgaggattcagagagtgaggctaaatccacaaagggaaggaacaagagggggaagagc
aaagctaaagcgatcaacaacaagaacacaggagctccgaagagaaggagtggtggaggg
caaaaagagggaaaagacgagggagacaaaaagtgggaggaaggagaggacgatgatgat
gaagatggagaaggaacaacgaataacggaataaaacgaaggagcgggaagaagaagggg
cctggagctgatgagtggttggaggtctatttggtaaaaacgtcttcctgggtttgcgtg
gatgttgagcacggtgtcgggatgccccacctctgctcccagaatgcaacagtgccggtg
acatacgtggtgtcagtggacggggatggatttgtgaaggacctaggaaagaaatacgac
cccacctggatgacatcttccaggaagaggcgggtggatgaggactggtgggaggaaacg
ctcgagccattcctgggacccgaggatgagagggacaaaaaggaggataaggagctccag
aataagcttctgaacaaacccctgccgatctctatagcggagtataagaaccacccactg
tacgccttaaagagacacctgctgaagtatgaagccatctatcctccaacagccaccgta
ctgggatactgcagaggagagccggtatattccagggattgcgtgcacaccctccactcc
cgagacacatggctgaaagaagcacgaacagtcagaataggagaagagccattcaaaatg
gtgaagggcttctctaatcgttcccgtaaggccaggatgatgtctgagctgaaggatgaa
aatgacctgcctctgtttggagaatggcagactgaagagtaccaaccgcctatagccgtg
gacgggaaggttccccgtaacgactacggtaacgtgtacctgttcaagccctgtatgtta
ccggtgggctgtgttcacctcaggctgcccaacctgcaccgcgtggccaggaagctgaac
gtcgacgccgccactgcggtcacaggctttgacttccatggaggatactcgcacgctgtg
actgacggttacattgtgtgtgaggagcatgaagagattctcagagctgcctgggtggag
gaacaagagctgcagaaacaaagggagaaagagaaaaaagaaaagagggtgatctccaac
tggactctgctggtgaaaggactcctgatcagagagaggcttaaacagcgctacggcaag
aagaaccaggggttggggaaccttgctcatggagacgacaccggtgggctttcatctgat
gaggaggcggttgagggtggaagtcctgaagctaagactgcatctgaaactctggccatg
tcctggcctcaaaacagacaagcagaggaggacggagggaacgccagcggactgaagaaa
aagttgacaacaaaacgacagaagagagggcaagagaaacaattgttcccctttgagaaa
gtataa

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