Xiphias gladius (swordfish): 120804569
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Entry
120804569 CDS
T07311
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xgl01001
]
120804569
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120804569
Enzymes [BR:
xgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120804569
Protein kinases [BR:
xgl01001
]
Serine/threonine kinases: Other
Other
120804569
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120804569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
LisH
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
120804569
NCBI-ProteinID:
XP_040010014
LinkDB
All DBs
Position
LG18:complement(18892502..18912225)
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AA seq
1550 aa
AA seq
DB search
MASASASVDSKAELTALLEQWERDQQGSTQELVNILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNALVNSYVMTSREFSLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQDKDAENKREIKRPSPRKTLSEPLLPLDEETVDGGFEEKPFTPGRNGGEREGTGPEE
DGEIPFSTIEPENELSFRLNSPHKTSSRANSAVKTMMKPMSAPGSLIHQGMSDGSSYLKR
KAERESGRTSKQKLNFSLPEPERNFSELSNSSWSEMSPWVIGNNYHLYPLTPEIEQRLIL
QYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEF
VAHEGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLEC
SHASGCCHATMFFSISFSFRAVLELFDKQDGLRRLVNLISTLEILNPEDQGALLSDDEIF
SSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEM
MEFLIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILT
VVPKTQLLLSEAVAVLDEGGSTVSTVGMSIVLAVAEGEVFVNDAEIQKSALQVVINCVCA
PDKRISSIGRIHHEHPRRHFNRPKPASVLTKMWNVVQSNNGIKVLLSLLTVKMPITDADQ
IRALACKALVGLSRSSSVRQIISKHASSLERRFSVLQDKRSEHVKFCKFAAELIERISGK
PLLIEYRDAVSWRLPGGQMWXAQSRITFPEKELLLLIRNHLVAKGLHDTATTLTKEADLP
MACLSHSSHSTSAFPPVAPPLPASPAATLPRTPRLANGVGSRLGNHPSHSSTPGSSHPQT
RPSTSQPTGSSSTAFPSTSVPHCSNGSPLIGRIVFSRERQTGCTTVSCKKTRVLRQKSDH
GAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPK
QRRQAPINFTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDESGFMCCAF
SARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSASWSYPLS
ALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYDIQTGQVTLSLNNPDLAN
NYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWD
LRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEMQMKSPFGSSFRTFNATD
YKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEEEEEDEED
QEDDDQEEDDDDDEDSDDDVDTDPLIAELENENGGEDEDDEEEDDGNDEFSPSDEEVARL
LEEDVDVGDDDDEDDNDEDDSDNDDVDLDVDNDSSDNSDLEDDIILSLNE
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagtgtggactccaaggcagagctgactgctctactggaacag
tgggagagggatcaacaaggcagcacgcaggagctggttaacatcctcacaaaaatctct
gagcttgttgagaaggagacagaggagtaccacaaagcggacccagaccctttcgatgat
cgacatcctgggagagctgatccagagtgcgtgttagggcatctgctcaagatcctgttc
aagaatgatgacttcatgaacgcgctggtgaatagctatgtgatgactagcagagaattt
tccctcaatgcagcagcttgtcgcctgcttcagaacatcatgcctggattggagacagca
gtggtctttcaagaaaaggagggtatagttgaaaggctatttaagtgggctcaggaggcc
gagcagcccctcagaatatatgccacaggcttgttggcaggagccatggagaaccaggac
attgcggccaactacagggaggagaactctgttttggtgcctttgatgctgcatcgctta
cgtgagcttcaggataaggatgcagagaacaaaagggaaatcaaacggcccagccccagg
aagaccttgagtgagcctttgctacctttggatgaggagactgttgatggaggctttgaa
gagaagcccttcacaccgggcagaaacggaggggaaagggaggggacggggccagaggag
gatggcgaaattcctttctcaaccattgagcctgaaaacgagctttcgttccgtctcaac
tctcctcataagaccagcagccgtgccaactcagctgttaaaaccatgatgaagcccatg
tctgccccaggttcactgatacaccaaggcatgtctgatggcagcagttacctaaaaagg
aaggcagagagggagagtggcaggacctcaaaacagaagctaaacttctctttgccagag
ccagagaggaacttcagtgaactttccaacagcagctggtctgagatgagcccctgggtg
attggaaataactatcatctgtaccctctaaccccagagatcgagcagaggctcatcctg
cagtatctcactcctctgggggagtatcaagagctgctggcagtgttcatgcagatggga
gctcgtgagctactcatgcattatatggatctaaagcagaccaatgatgtgcagctcacc
tttgaggctctcaagtacctggcatctttgctgctgcacaagaagtttgctgcagagttt
gtggctcatgaaggagttcagaagttgctggaaattcccaggccatctatggctgccact
ggagtgtctctgtgcctctattatcttgcctataaccaggatgccatggagagggtgtgc
atgttgccccactccatcctgtcagatgtggttggttacacgctgtggctgctggaatgc
tcacatgcgtccggctgttgccacgccaccatgtttttttccatctccttttcattccgt
gccgttctggagcttttcgacaagcaggacgggctccggcgccttgtcaatctgattagc
acactggagatcctgaacccggaagaccagggagcacttctgagtgatgatgagattttc
tccagcaggcagactgctaagcacacctgcatggcactgcgcaggtactttgaggcccat
ctggcgatcaaggtggagcaggtgaagcaatccctgcagcgcacagaagggggtgccccc
attcactcccagccgtactacaaggcggtcagctatagccgtgagcaggtggtggaaatg
atggagtttctgatagagtacggaccactccggctttactgggaaccagcagaggtcttc
cacaagctgtcgtgtgtccagctcctcctgcagctcatttccattgcctgtgactggaga
acctattatggcaggagtgatacagtgcgatatgccctcgacatcctgagcatcctcaca
gttgttccaaagacccagctgttgttgtctgaggctgttgctgtcctcgatgagggagga
tccactgtttccactgttggaatgagtatagtcctggcagtggcagagggagaggtattt
gtgaatgatgccgagattcagaagtcggctctgcaggttgttatcaactgcgtctgtgct
ccagacaaacgcatatccagcattggcaggattcaccatgagcacccccgtcggcacttt
aacagaccaaagccagcgagtgtgctcactaagatgtggaatgtggtgcagtccaacaac
ggcatcaaggtgctgctgtccctgctgacagtgaagatgcccattacagatgcagatcag
atccgagcgctggcctgtaaggctctggtgggtctgtctcgctccagctccgtcagacag
atcatcagcaagcacgcaagctcgcttgaaaggcgtttctctgtgctccaggacaaacgc
agtgagcatgtcaagttctgtaagtttgcagctgagttgatagaaaggatctccgggaaa
ccgctgctgatcgagtaccgagacgcagtctcatggcggctgcccggagggcagatgtgg
taagcccagtccaggatcaccttccctgagaaagagctgctgttgcttattaggaaccac
ctggtggccaaaggccttcatgacacggccaccacactcaccaaggaggcagatctcccg
atggcatgtctgtctcattcttcacattcaacttctgctttccctcctgttgctcctcct
ctgcctgcctctcctgctgctactctcccccgaacgccacggctggccaatggtgtcggg
tcaagactcggaaaccatccttctcattcatccaccccggggtccagccatcctcaaacc
cgtccctctacgtcacaacccactgggtcctcttctactgctttcccctcaacgtctgtc
ccccactgtagcaatggctccccactgatcggccgaatcgttttctctcgtgaacggcaa
acagggtgcactacagtgagctgcaagaagactcgggtgctgaggcagaagtctgaccat
ggggccttcagccagagtccggccatgaagaagcagtttgacaggcacctgccctctccc
cctgcattagacagcattataacagagtacctgagggaacagcacgcacgctgtaagaac
cctgtcgcaacatgcccgcctttctcgctcttcacaccccatcaatgccctgagcccaaa
cagagacgccaagcacccatcaactttacatcccgacacacacggagggttatatatcct
aaatatggaggagtagatggaggatgctttgacagacatctcatcttcagcaggttccgt
cccatctccgtgttcagggaggctgacgaggatgagagtggattcatgtgttgtgccttc
tcagctcgcgagcggttcctgatgcttgggacgtgcacagggcagctcaagctctacaat
gtgtttacaggccaggaggaagccagctacagctgtcacagttcggccatcactcacctg
gagccctcacgggatggctctctgctgttaacgtcagcctcttggagttaccctctgtct
gcactgtggggcatgaaatcagtgttcatcatgaagcattcctttctgggtgaccattat
gtggagttcagtaagctttcacaagatcgtgtcattggaactaaggaacatatagcacgt
atttatgacatccagacggggcaggtaactctgagtctcaacaacccagacctggctaac
aactacaagcggaactgtgccaccttcaaccccacagatgacctggtactgaacgacggc
gtgctgtgggacgtgcgcacggctcaggccatccacaagtttgacaaattcaacatgaac
atcagcggtgtgttccatcccaacggcctggaggtcatcataaacacggaaatttgggat
ctgcggaccttccacctcctccacacagttcctgctctggaccagtgcagaatagtcttc
aacaacaacggcaccgtcatctacggagcaatgttgcaagctgatgatgaagacgacatg
atggagatgcagatgaaaagtccatttggttcgtcgtttaggacctttaatgccacagac
tacaaaccaattgccactattgatgtcaagaggaatatatttgacctttgcacagacaca
aaagactgctacctagctgtgattgagaaccaagactcagttaacaccgacacggtctgc
aggctgtatgaagttggccggcaaagacttgcagaggaagaggaggaggacgaggaggat
caggaggatgatgatcaggaggaagacgatgatgacgacgaggactcagatgatgatgtc
gatacggatccccttatcgccgagctagagaacgagaatggcggagaggatgaggatgac
gaagaggaggatgatgggaatgatgaattctctccctctgatgaggaggtggctcgtctc
cttgaggaggacgtcgacgtcggggatgacgacgatgaggatgacaatgacgaagatgac
tctgataacgacgatgttgatctggatgttgacaatgacagttccgacaactctgacctt
gaggatgacatcatcttatccctgaacgagtga
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