Xiphias gladius (swordfish): 120804630
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Entry
120804630 CDS
T07311
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120804630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120804630
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120804630
Protein recycling
Other Rab GTPase associated proteins
120804630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
CSN8_PSD8_EIF3K
Motif
Other DBs
NCBI-GeneID:
120804630
NCBI-ProteinID:
XP_040010031
LinkDB
All DBs
Position
LG19:complement(14672720..14678872)
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AA seq
470 aa
AA seq
DB search
MWTDKHRGIRVSQEELLCKNTCGYYGNPAWQGLCSKCWRERARPAGAPRQDTRPRNDGTP
LTFSKFEEKKNIEKGHRINTMRRLFWGSPSPPKRQESSESQTKALKAYQSLEPGDFTGFL
KILRSPSSQRLQSRCTAFLNTMEAYHDLPVQKQSDLVLDFYQSFAEYFSSFPDAQVTQIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLSVPFPDKKTAVTSDP
FLPAITAIIEMDAKRAPQDKLACVSKCSQHVFEALSTSRSEPANADDFLSGLVYVVLKAN
PPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAMAFIEKLDGPALNLSPEEFEGYMLR
QRAPSVGNKRQQIVSDTQNLLEELKGRQEKLDQGVVALNVQLQKWMQAVRSQLDEATAQF
ALVQEEITARPELSNVFSSPSPIASLQGGDKDQSVQVLTDQHARSKETDC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagataagcacaggggaatcagagtttctcaggaggagctgctctgcaagaat
acctgtgggtattatggaaaccctgcatggcaaggcctctgctccaaatgctggagggag
agagcacgtccagctggagccccgagacaagacacaaggccaagaaatgatggaactcct
ctcaccttctccaaatttgaggagaagaaaaatattgagaaaggtcatcgaattaacaca
atgaggagactcttctggggcagcccatcgcctccaaaacgccaagagtcttctgaaagc
caaacaaaggcgttaaaagcgtatcagagccttgagcctggggacttcactggtttccta
aaaatacttcggagcccttcctcgcagcgcttgcagtcccgatgtacagcttttctcaac
acaatggaggcttaccatgatctgccggtacagaaacagtcggatcttgttctggatttc
taccagtcttttgctgaatattttagcagttttcctgatgcccaggtcactcagataatg
gagcacgtagagaagttaataatgacgcggttgcacaaatgggttttctgccatgacagc
tgtgatgatgaacagaaagacctggctctccagagaaggatacgctccttaaactgggtt
actccgcagatgctgagcgtaccttttcctgataaaaagactgccgtcacaagcgacccc
tttctgcctgctataacagcaataattgaaatggatgccaaacgagcgcctcaggacaaa
cttgcatgtgtgtccaaatgcagtcagcatgtcttcgaggcgctctccacctcgagaagc
gagcccgccaatgctgatgacttcctgtcagggcttgtttatgtggtgctgaaggccaat
ccaccccgcctacactccaacatgcaatatgtgattcggtttggtctccctcacagtctg
atggcaggagagagcggctactatttcacaaatttgtcttgtgctatggctttcattgaa
aagctggatggaccagcactaaacctcagtcctgaagagtttgagggctacatgctgcgt
cagcgtgctccctctgtaggaaacaagaggcagcagattgtcagcgacacacaaaacctg
ttagaagagctaaaaggcagacaggagaagctggaccagggggtggttgctctcaacgtg
cagctgcaaaagtggatgcaagcagttcgttcacaactggatgaggccacagcacagttt
gctctggtacaggaggagataacagctcgacctgagctttcaaacgttttctcatcacca
tctcctattgcatcactgcagggaggtgacaaagaccagtcagtgcaggtgcttacagat
caacatgcacgttcaaaagaaacagactgttaa
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integrated database retrieval system
