KEGG   Xiphias gladius (swordfish): 120804682
Entry
120804682         CDS       T07311                                 
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    120804682 (usp30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xgl01002]
    120804682 (usp30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xgl04131]
    120804682 (usp30)
   04121 Ubiquitin system [BR:xgl04121]
    120804682 (usp30)
Enzymes [BR:xgl01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     120804682 (usp30)
Peptidases and inhibitors [BR:xgl01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   120804682 (usp30)
Membrane trafficking [BR:xgl04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    120804682 (usp30)
Ubiquitin system [BR:xgl04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    120804682 (usp30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700
Other DBs
NCBI-GeneID: 120804682
NCBI-ProteinID: XP_040010131
LinkDB
Position
LG19:15710850..15716948
AA seq 501 aa
MLRCRPETSDKLVGEFLGTGTVVRNKMIKNWGVIGGIAAAIAAGVYVLWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSGSPTIQSCKDNQLSTTLLQLLRAL
SSDEPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTTSLEEERDRQPKVAHLF
DMQFLESLPDQDEKTMTCRSRAPLHPIPSPWKFPHPFHGRLTSNMSCKHCEQQSPVRYDS
FESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQETTVKGQVLESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSTEGTPIKRQEHVQFTEYLSMDRYKHNISTQRSQRIT
CAPKPMKAEDLDDVIEKPTANGTEHHNNNRPFSNGTCSSVFLHSPGVSPQLGLMYDYSST
EYLFQLTAVLVHHGDMHSGHFVTYRRSPSSPRSSSPFSSQWLWVSDDSVRKASQHEVLSS
NAYMLFYERVRRLNLALHSEE
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgttgaggtgcagacccgagacctctgataagcttgttggggagttccttggcactgga
accgtagtcagaaacaagatgattaaaaactggggtgtcattggtgggatagctgctgca
attgcagctggagtatatgttttgtggggcccaattacagagagaaagaagcgaaagaga
ggtatggttcctggactgttgaacttgggcaacacctgcttcctgaactctttgcttcag
ggtttggcagcgtgtccgtccttcatcaggtggctggagaagttttcaggttcgcctacg
atccagtcatgcaaggacaaccagctgtccacgacacttcttcagcttctcagagctctg
tccagtgatgagcctggggaagaagatgtacttgacgccggatgcctcctggatgttctc
agactgtaccggtggcacatcagttcatttgaagagcaggatgcacatgaactttttcat
gtccttacaacttctctggaggaggaacgtgatcgtcaacccaaagtagctcacttgttt
gacatgcagttcctcgagagtctccctgatcaagatgagaaaactatgacctgcagaagt
cgagcccctcttcatccaataccaagtccttggaagtttccgcacccttttcatggtcgt
ttaacgagcaacatgtcatgcaagcactgcgaacaacaaagtccggtgcggtacgactca
tttgagagcctctccctgtccatccctttacctcagtggggtcgacctatctctctagat
cagtgtcttcagcatttcatctcctcagaaaccatcaaagaagtggagtgtgaaaactgc
accaagcttcaacaagagaccacagtaaaggggcaagttctggaaagtcagaggacaaca
tttgttaaacagctaaagctgggaaagcttccccagtgcctctgcatccatttacaaaga
ctaacgtggtccaccgaaggaacccccatcaaaagacaggagcatgtgcagtttacagag
tatctgtcaatggaccgctacaaacacaacatttccacacagagaagtcagcggatcacg
tgtgctccaaagcccatgaaggcagaagatttggatgatgtcattgaaaagcccactgcc
aatggcactgagcatcataacaacaacagacctttttccaacggaacctgttcatctgta
tttcttcactctcctggtgtgagcccacagctcggcctcatgtatgactacagttctacg
gagtatcttttccagctcacggctgtgctggtccaccacggtgacatgcactcaggacat
tttgtcacgtaccgccgcagcccttcctcacctcgcagctcttcacccttcagctcccag
tggctctgggtgtcggacgactcggtaagaaaagccagccagcacgaggtgctgtcttcc
aacgcttacatgctcttctacgagagagtaagaaggctgaaccttgctctgcactcagag
gagtaa

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