Xiphias gladius (swordfish): 120804682
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Entry
120804682 CDS
T07311
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120804682 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120804682 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120804682 (usp30)
04121 Ubiquitin system [BR:
xgl04121
]
120804682 (usp30)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120804682 (usp30)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120804682 (usp30)
Membrane trafficking [BR:
xgl04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
120804682 (usp30)
Ubiquitin system [BR:
xgl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120804682 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
120804682
NCBI-ProteinID:
XP_040010131
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All DBs
Position
LG19:15710850..15716948
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AA seq
501 aa
AA seq
DB search
MLRCRPETSDKLVGEFLGTGTVVRNKMIKNWGVIGGIAAAIAAGVYVLWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSGSPTIQSCKDNQLSTTLLQLLRAL
SSDEPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTTSLEEERDRQPKVAHLF
DMQFLESLPDQDEKTMTCRSRAPLHPIPSPWKFPHPFHGRLTSNMSCKHCEQQSPVRYDS
FESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQETTVKGQVLESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSTEGTPIKRQEHVQFTEYLSMDRYKHNISTQRSQRIT
CAPKPMKAEDLDDVIEKPTANGTEHHNNNRPFSNGTCSSVFLHSPGVSPQLGLMYDYSST
EYLFQLTAVLVHHGDMHSGHFVTYRRSPSSPRSSSPFSSQWLWVSDDSVRKASQHEVLSS
NAYMLFYERVRRLNLALHSEE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtgcagacccgagacctctgataagcttgttggggagttccttggcactgga
accgtagtcagaaacaagatgattaaaaactggggtgtcattggtgggatagctgctgca
attgcagctggagtatatgttttgtggggcccaattacagagagaaagaagcgaaagaga
ggtatggttcctggactgttgaacttgggcaacacctgcttcctgaactctttgcttcag
ggtttggcagcgtgtccgtccttcatcaggtggctggagaagttttcaggttcgcctacg
atccagtcatgcaaggacaaccagctgtccacgacacttcttcagcttctcagagctctg
tccagtgatgagcctggggaagaagatgtacttgacgccggatgcctcctggatgttctc
agactgtaccggtggcacatcagttcatttgaagagcaggatgcacatgaactttttcat
gtccttacaacttctctggaggaggaacgtgatcgtcaacccaaagtagctcacttgttt
gacatgcagttcctcgagagtctccctgatcaagatgagaaaactatgacctgcagaagt
cgagcccctcttcatccaataccaagtccttggaagtttccgcacccttttcatggtcgt
ttaacgagcaacatgtcatgcaagcactgcgaacaacaaagtccggtgcggtacgactca
tttgagagcctctccctgtccatccctttacctcagtggggtcgacctatctctctagat
cagtgtcttcagcatttcatctcctcagaaaccatcaaagaagtggagtgtgaaaactgc
accaagcttcaacaagagaccacagtaaaggggcaagttctggaaagtcagaggacaaca
tttgttaaacagctaaagctgggaaagcttccccagtgcctctgcatccatttacaaaga
ctaacgtggtccaccgaaggaacccccatcaaaagacaggagcatgtgcagtttacagag
tatctgtcaatggaccgctacaaacacaacatttccacacagagaagtcagcggatcacg
tgtgctccaaagcccatgaaggcagaagatttggatgatgtcattgaaaagcccactgcc
aatggcactgagcatcataacaacaacagacctttttccaacggaacctgttcatctgta
tttcttcactctcctggtgtgagcccacagctcggcctcatgtatgactacagttctacg
gagtatcttttccagctcacggctgtgctggtccaccacggtgacatgcactcaggacat
tttgtcacgtaccgccgcagcccttcctcacctcgcagctcttcacccttcagctcccag
tggctctgggtgtcggacgactcggtaagaaaagccagccagcacgaggtgctgtcttcc
aacgcttacatgctcttctacgagagagtaagaaggctgaaccttgctctgcactcagag
gagtaa
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