Xiphias gladius (swordfish): 120804779
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Entry
120804779 CDS
T07311
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120804779 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
120804779 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120804779 (thoc5)
03041 Spliceosome [BR:
xgl03041
]
120804779 (thoc5)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120804779 (thoc5)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120804779 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
120804779
NCBI-ProteinID:
XP_040010319
LinkDB
All DBs
Position
LG19
Genome browser
AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRNEGGTPEMKRGRGEGDQQDARVYSEEVELDGRDPEQDYLQYKESC
ETLATLMSEIQELKANGAKDGCAEVEQKRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEDEFYQDAPQEISRPHLT
KNDPHQLTLARLDWELEQRKRLAKKYKESQATKEKIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEYLSMPFEQTQKQTEVARHLPPPLYVLFVQANAYGQACDKNLSVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLTCKDGS
TLHLSFYYLMNLNIMTVKTKVSTSTDLTTAISAGELLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIVSFADYMEELGHPYMWVQSLGGLHFPTDASEGVRVGSSLSASHMESTMKLL
RGRVQSRLALHKQFASLEHSIIPVSSECQHLFPAKIISRLARWTTITHQEYMDLPYTRHV
TEAGLAKETDLYFMGVVERGTACLQAAVVLSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQISRLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacgccctgaagaagcgaaagtcgaaagttctccgcaatgaaggaggaact
ccagagatgaagagaggtcgcggagagggagaccagcaggatgcacgcgtgtacagtgag
gaagtggagctggatggtagggaccctgagcaggactatctgcagtacaaagaatcatgt
gagactttggccactctcatgagtgagatccaggagcttaaagccaacggagccaaggac
gggtgtgctgaggtcgagcagaaacgtatgcagagctgcatccacttcatgaatctgaaa
aaactcaatcgtctggctcatatgcgactaaagagaggcagagaccagacacacgaggca
aagcagagagtggatgtgctgcaccttcagttacagaacctactgtacgaagttatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcatgaggaaatagacctg
gtgtctgaggatgagttttaccaggatgccccgcaggagatttccaggccccacctcaca
aaaaatgacccccaccaactcacactggctcgactggactgggagcttgaacagagaaag
aggttggcaaagaaatacaaggagtcacaggccacaaaagagaagatccagaagagcatt
gaggtgaagaaggaacatctgagaagcttacagccaggactgaatgccatcatgcaggcc
tctctgccagtgcaggagtatctgtccatgccttttgaacagactcagaaacagactgag
gtcgcccgccatctccctccgcctctgtatgtcctgtttgttcaagccaatgcctacggc
caggcctgcgacaagaacctaagtgtgtcaatcagtggtgatgtggatgaggccaaggcc
ttgtccaaacccccagaagattcccaggatgatgagagtgattcagatgcagaggaggag
caagagaaaacgaagaggaggcggcccactacaggtggccagctggatgacaaaagacgg
gagatgttgaagaggcaccctctatccctctgcttagacctcacctgtaaagatggcagc
accctccatctctccttctactacctgatgaatctgaacattatgacagtaaagaccaag
gtctccacctccacagacctaaccacagccatcagtgcaggggagctgctgaaatcagac
actctactcagctgtctctacaccagcgaccagggacgggagacacccaatccagctaat
cgctaccagtttgataaagtcgggattgtttcctttgctgattatatggaggagctgggc
catccctacatgtgggttcagagtcttggaggactacactttcccactgatgcttcagag
ggggtgcgtgtgggcagttctctgagtgccagccacatggagagcaccatgaagctgctg
aggggacgagtccagtcccgcttggctttgcacaaacagtttgcctctttagagcacagc
atcatcccggtctccagtgagtgtcagcacctctttcctgccaagatcatctcccgttta
gctcgctggaccactatcactcaccaggagtacatggatctgccatatacacgtcatgtg
actgaggctgggctggcaaaggagactgatctctactttatgggagtggttgaaagaggc
acagcttgtctccaggccgcagtggtgctgagtccccgttatccagagatctctcctctt
ttctccctctctctcagctggaagggagagcgcagtggacgcactgatgacaaccttcga
gccatggaaagtgaggtcaatgtgttcaaaaatgaactacaaggaccacgtccaggacac
cagctccttaccaatcagatttcacgcctgtgtgtctgcctggatgtgtatttggagacc
gaaggccaagatgatagtgtggagggaccacgagagttcccccgtgaaaagatgtgcttg
cgcactgtcaggggtccaaatcgtctgaaaccattcaagtacaaccatcctcagggcttc
ttcagtcatcgctaa
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