Xiphias gladius (swordfish): 120804843
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Entry
120804843 CDS
T07311
Symbol
prdm8b
Name
(RefSeq) PR domain zinc finger protein 8b isoform X1
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120804843 (prdm8b)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120804843 (prdm8b)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120804843 (prdm8b)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120804843 (prdm8b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
Zf-C2H2_ZNF451_C
zf-C2H2_2
DUF1835
DUF5810
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
120804843
NCBI-ProteinID:
XP_040010449
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Position
LG19:2890887..2897184
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AA seq
602 aa
AA seq
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MPKLFPCGIPSGVYAPGLRLSPVASVPSPQREMEESGSQKLAWDGDAKAVHQCLTDIFTS
VYTTCDIPENAIFGPCVLSHTSLYDSIAFVALKSTDKRTAPYIFRVDTSAANSTSEGLMW
LRLVQSARDKEEQNLEAYVKNGQLFYRSLRRIEKDEELLVWYGKDLIDLLLLCSSRAPAK
SKGSSHHSCPDCSQRFQFEFPFLAHLRFRCTKRLQSIAGADEEPSKESSAERLNTTQTRT
SPKLGRSEGFSGPQDSSKPSTDFHNLARDLENNRTSPPSDKEAEICSESSGKRKFSEIED
RDCRGPSLPQTKSKDELATSAQNYRGVYGLEENHRSLSPPGSTESGEGKRSAFTEVKKLP
QNLKHHSGNKNLQSSNSENKDGGRPSSNPSEKHLNIRQVLSETQPPQTSPMGSAFTSVSQ
QGGGSGGERKSAFSQPSRSSFSQISPLVMPPKLLDCHPAVGDTISSSRLYQADHLAAKLQ
GAELGANCPVPSGMAKQNPFVYATAFWPKNSGPIQLQMPSALTLLPPSFTSLCLPAQNWC
AKCNASFRMTSDLVYHMRSHHKKEYSMEPLVKRRREEKLKCPICNESFRERHHLSRHMTS
HN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagctgtttccctgcgggatcccgtccggcgtttacgctcctggtctccgcctc
tcgcctgtcgcctccgtcccgtctccgcagcgtgaaatggaggagtccggctctcagaag
ttggcgtgggacggggacgccaaagcggtccatcagtgcctgacggacattttcacgagc
gtctacacgacgtgcgacatccccgaaaacgccatcttcgggccctgcgtgctgagccac
acgtcgctgtacgacagcatcgccttcgtggctctgaagtccacggacaagcgcacggca
ccgtacatcttcagggtggacacctcggcggccaacagcacctcagagggcctgatgtgg
ctgcggctggtgcagtccgcccgggacaaagaggaacagaacctggaggcctacgtgaag
aacggccagctcttctaccgctcgctccgccggatcgagaaggacgaggagctgctggtc
tggtacggcaaagacctcatcgacctgctgctgctctgctccagcagagcgcctgccaag
agcaaaggttcgtcccaccactcatgcccagactgcagccagcggttccagtttgagttt
ccattcttggcccatctccggttccgctgcactaagagactgcagagcatcgcaggggcc
gacgaggagcccagcaaagaaagcagcgcagagcgactgaacacgacccaaaccaggacc
agcccaaagctgggccgctccgagggcttcagcggccctcaggacagcagcaaaccctcc
acagactttcacaacctggccagggacctagagaacaaccggaccagccccccgagcgac
aaggaggccgagatctgcagcgagagttcggggaagaggaagttctcggaaatagaggac
agggattgccgagggcccagccttccacagaccaagtctaaagacgagcttgcaacatct
gcacagaattacagaggagtgtacggcctggaggagaaccacaggtccctttccccacca
ggctccacagagagtggggagggcaagcgcagcgccttcaccgaggtcaagaagttgccc
cagaacctcaaacaccacagcggcaacaagaacctccagagctccaactctgaaaacaaa
gatggaggtcgccctagcagcaatccatcagagaagcacctcaacatcaggcaggtgctg
tcggagacccagccgccccaaacctcgcccatgggcagtgctttcacctcggtcagccag
caaggcggcggcagcggcggcgagaggaagagcgccttcagtcagccgtctcgctcctcc
ttctcccagatttccccgctggtgatgccgcccaagctgttggactgccacccggcggta
ggcgacaccatctcttccagcagactctaccaggccgaccaccttgctgccaagctgcag
ggtgcagagctcggtgccaactgccccgtgccgagtggcatggccaagcagaaccccttt
gtctacgccaccgccttctggcccaagaactccggacctatccagcttcaaatgccctcg
gcgctcaccctcctgccgccctccttcacctccctctgcctgccggcgcagaactggtgc
gccaagtgcaacgcctctttccgcatgacctcggacttagtttaccacatgcgatcccac
cacaaaaaggagtactccatggagcccctggtcaaacggcggcgcgaggagaaactcaag
tgcccgatttgcaacgagtccttccgggagcggcatcacctgtcacgtcacatgacctcg
cacaactga
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