Xiphias gladius (swordfish): 120804845
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Entry
120804845 CDS
T07311
Symbol
scarf2
Name
(RefSeq) scavenger receptor class F member 2 isoform X1
KO
K24319
scavenger receptor class F member 2
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
120804845 (scarf2)
Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
120804845 (scarf2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_PEAR1L
EGF_STAB1-2
EGF_2
JAG1-like_EGF2
Tweety
Motif
Other DBs
NCBI-GeneID:
120804845
NCBI-ProteinID:
XP_040010459
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Position
LG19:complement(5970999..5990323)
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AA seq
957 aa
AA seq
DB search
MEVKNSFAVVAVVLLFVCSGFGQELNPKGRNVCKAPGSSGSACCSGWGQLGDECLTPLCE
GNFTCKENEVCVRPNECRCRHGYFGASCDTKCPAQFWGPDCKGKCNCYPNGQCDDLTGEC
TCNHNRWGPNCENACLCQKGKCDQETGKCTCHPGIWGPQCNNNCYCSINSVCDAMTGRCL
CNPGWTGRNCAIQCNCNNSPCDQFTGRCQCRERLWGPRCERYCQCIHGKCNQADGSCTCT
PGYRGKFCREPCPAGFYGQNCRNRCGHCKGQQPCKVTEGRCITCDRGWNGTRCDQLCSKG
FFGENCQEVCPTCKDGHHCDPIHGKCSHCNPGWIGDRCEVRCPNGTYGENCENNCSHCFN
GICHVVTGECLCDAGFYGTYCNMTCHPGQYGVNCNQTCSCHDKNCDPVSGACYLQFSASR
LSEPNQRMGVIAAGTLVSFLLIVLLSLLCCCCLCRHKDDHNKKAKRILCGRFSRISTKLP
RIPLRRQKLPKVVVAHHDPENTFNCSFIEPPSVAEQPSPSSWSSQESFSSFESGDEGPVY
CVPHEESMNESKEKRSPSPATERLEAVPNEDDAGEYTSLKDTSVTKPEGNEQPLLKSSDS
EGSTSGSESTTAALYARIARLSKQSKEDDGSGKDGDGTPTPEAKRNGKPPPSPGKPKPRP
PDPSTKPKISWIHGNTTGSPQPEQQGQGGMKALGVPKENKRSSSDGSAKSEEHHKMKERN
REQQKKQEGKEADANGSPSKHKPLRGKKSGDEHSSPSHMEHINGVVQNALKKISSFHSSS
SAKKSADSPKETPKEPPKSPKVIHPHMNSEAATLLAAQLKEKTQSINRNEGTGLTKTNGL
STPKGNREKPTPPQKAKRTPSSGLSQQSSTKPLLPTSSSLQKMVAPVTTDLGTPEAKSPE
KQDLNGSRSGDPTLDPTPRKTPIKKPPRKKGKEGTLDTPESKSPQQKTAIMPPQVVK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaagaactcttttgccgttgttgcggtggttttgctcttcgtttgctccggt
ttcggccaagaactcaaccctaaaggcaggaatgtatgcaaagcacctgggtcgtcggga
tcggcgtgctgcagcggatgggggcagctaggggatgaatgcctgacacctctctgcgaa
ggcaacttcacctgcaaggaaaatgaggtgtgtgtcaggcccaatgaatgtcgctgtcgc
catggatactttggagctagctgtgatactaagtgccctgcccagttctggggccctgac
tgcaaagggaaatgtaattgttatcccaacggccagtgcgatgacttgaccggcgagtgt
acctgcaaccacaatcgttgggggccaaactgcgagaacgcatgcttatgccaaaagggc
aaatgtgatcaagagacgggcaaatgcacatgccaccctggcatctggggtccccagtgc
aacaacaactgctactgcagcatcaactctgtctgtgatgcgatgacaggccgttgcctg
tgcaaccctggctggacggggaggaactgtgcaatccagtgtaactgtaacaattcacca
tgtgaccagttcacgggacgttgtcagtgccgagagaggctgtggggcccacggtgtgaa
cgatactgccagtgcatccacggcaaatgcaaccaagccgacggctcgtgtacctgcaca
ccagggtaccgtgggaagttctgcagggagccatgtcctgctggattctatggtcaaaac
tgcagaaacaggtgtgggcactgcaagggccagcagccctgcaaggtgacagagggacgc
tgcatcacctgcgacagaggctggaatgggacgcggtgtgaccagctctgctccaagggc
ttctttggcgaaaactgccaagaagtgtgtcccacctgcaaagacggtcaccactgcgac
cccattcatggcaagtgctctcactgtaaccccggctggattggggacaggtgcgaggtg
cgctgccctaacggcacctatggcgagaactgtgagaacaactgcagtcactgttttaac
ggcatctgtcatgttgtcaccggagagtgcctgtgtgacgcgggattttatggcacctac
tgcaatatgacctgtcatcctggccagtacggagtgaactgcaaccaaacctgctcttgc
catgacaagaactgtgatcctgtgtctggtgcctgctatcttcaattctctgcatctcgt
ctttcagagcccaaccagcggatgggtgtgattgcggctggaaccctggtctccttttta
ctgattgtcctcctctcgctgctgtgctgctgctgcctgtgtcgacacaaagacgaccac
aacaaaaaagccaagcggatcctgtgtggacgattcagccgaatcagcactaaacttccc
cggattccactgaggcgacagaaactgcccaaagtagtcgtagcccaccacgacccagag
aacaccttcaactgcagcttcattgagcccccctcagtagccgagcagccctccccctcc
tcctggtcgtcccaagagtccttctcttcctttgagagtggagacgaggggccagtttac
tgtgtgccccatgaagaatctatgaatgaaagcaaagagaagcgcagccccagcccagca
acagagaggctagaagctgtccctaatgaggatgatgcaggggagtacacctccctgaaa
gacaccagtgtcacaaaaccagaaggcaatgagcagccccttctcaagtcttctgacagt
gaaggctccaccagtggctctgagtccacaactgcagctctctacgcccgcattgcccgc
ctctccaagcagtccaaggaggatgatggtagtggcaaggatggggacggcactcctaca
ccagaggccaagcgcaatggaaaaccaccaccttcacctggcaaacccaaaccacgccca
ccagatccatccactaagcccaagatatcgtggatacacggaaataccacagggtctccc
cagccagagcagcaggggcaggggggaatgaaggcactgggagtgccaaaggagaacaag
aggagctcgagtgatggctcagcgaagagcgaggagcatcataaaatgaaggagaggaac
cgtgagcagcagaagaaacaagagggcaaggaggcagacgccaatggctcccccagtaaa
cacaaacctctgcgaggtaagaagtctggggacgagcacagcagtcccagtcacatggag
cacattaatggtgttgttcagaatgccctgaagaagattagtagctttcacagctcctca
tctgcaaagaagagtgctgacagtccaaaggagacacccaaggagccacccaagagccct
aaggtcatccatcctcatatgaactctgaggctgccacgctgctggctgctcagctcaag
gagaaaactcaaagcatcaaccggaatgaggggacaggcctgacaaagaccaacggtctc
tccacacccaagggaaaccgggagaagcccacacctccacagaaagccaagaggaccccc
tccagtggattgagccagcagagctccaccaagcccctgctgcccacctctagcagcctc
cagaagatggtggcacccgtcactaccgacctcggaacccctgaagccaagagcccggag
aagcaggacttgaacgggtcaaggtcaggggacccaacgctggatcctacaccaaggaag
actccgataaaaaagccacccaggaagaaaggcaaggagggtactttggatacacctgaa
agtaaatcaccccagcaaaagacagccatcatgccaccacaggtagtgaaataa
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