Xiphias gladius (swordfish): 120804888
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Entry
120804888 CDS
T07311
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120804888 (hnf1a)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120804888 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120804888
NCBI-ProteinID:
XP_040010544
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Position
LG19:22932650..22938956
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AA seq
562 aa
AA seq
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MEGKETARAAKARPSRLTALQEQLIWALLGSGLSRDVLVQAMGELEQDRTSAGAERGERG
DGESSEEGEMDFPPPIYREIEKLTPEEAAKLRDAVDQLLQEDPWHVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKQCEISQQFTNAKHGLTSVEE
QGEDTRKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTNQSASSSNLNLPQSPEHDVKYSQ
QILCDTLSSARGSGGERVGRLVVSPVQLEPSHTLLETHNPKPVSSCGPLPPVSTLTSLHS
LSASPASSQGLIMASLPSVMSLGESSLLIGLTSTQPQSVPVINNVGGGFTTLQPFSFQQQ
LHASPQQPISQQLQSHMGASPFMATMAQLPCHMYNKSDSPQCHSSSLLSQAMVITDSNSL
GTLTSLTAVRQILTADAEEQTDQPLQEDSLHLQPHTPVPASSESLELYSASQTTDSHQSH
LLSPSTTDISSYIPTQMVSTAQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaagagacggccagggcggccaaggcgaggccgagccgtctgactgccctt
caggagcagctgatctgggccctgctgggatctggattgtcccgggacgtcttggtccaa
gccatgggggaactggagcaggacaggacgagtgctggcgccgagaggggagagaggggg
gatggagagagctccgaggagggagaaatggatttcccaccgcctatataccgagagatt
gagaagcttaccccagaggaggcggccaaactgagggatgcagtcgaccagctactgcaa
gaggacccctggcatgttgcaaaaatggtgaaaagctacatgcagcagcacaacctccct
cagagagaggtagtggagtccacaggactcaaccagtcccacctctcccagcacctcaac
aaaggcacgcccatgaagaaccagaagagagctgctctgtacagctggtacgtcaagaag
cagtgcgagatcagccagcaatttaccaatgccaaacatggccttacatcagtggaggag
caaggagaagatacaaggaaaggacggaggaacaggttcaagtggggtccagcatccctg
cagatccttttccatgcctacgaacgacagaagaaccccagcaaagaggagagagagggg
ttagtggaggagtgcaacagggcagagtgtctgcagaggggagtgtccccctctcagctt
gctggactggggtccaacctggttactgaggttcgggtgtacaactggttcgccaaccgc
cgcaaagaggaggccttccgtcacaaactggcccttgacacgcctttcaccaaccaatct
gcgtcatcttctaacctaaaccttccacagagtcctgagcacgatgtgaaatacagccag
caaatcctgtgtgacactttgagctcagccagaggtagcgggggagagagagtggggcgt
cttgtggtcagccctgttcaactggagccgagccacacactcctcgagacccataatccc
aaaccggtgtccagctgtggcccactgcccccagtaagcactctgacctccctacacagt
ctgtctgcctcccctgcttcctcacagggcctcatcatggcctcactgcccagcgtcatg
agcctgggggagtcctcacttctcattggtttaacctccacgcagcctcagtccgtacct
gtcataaacaatgtagggggtggtttcacaacgcttcagccgttctcattccagcagcag
cttcacgcctctccgcagcagccaatatcacagcagcttcagagtcacatgggtgccagt
ccgttcatggcaaccatggcgcagctgccatgtcacatgtacaacaagtcggattcaccc
cagtgccattcctccagtctgttgtcacaagccatggtcatcaccgacagcaacagcctg
gggactctgaccagcctcactgctgtcagacagattctaacagcagatgcagaggaacag
acggaccaacctttacaggaagattctctgcacctgcagccacacacacctgtgccagca
tcttctgagagcttggagctgtattctgcctctcagacaacagacagccatcagtctcac
ctcctctcaccctcaacaacagacatcagctcctacattcctacacaaatggtttctact
gcgcagtag
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