Xiphias gladius (swordfish): 120804910
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Entry
120804910 CDS
T07311
Symbol
gldc
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00260
Glycine, serine and threonine metabolism
xgl00630
Glyoxylate and dicarboxylate metabolism
xgl00670
One carbon pool by folate
xgl00785
Lipoic acid metabolism
xgl01100
Metabolic pathways
xgl01200
Carbon metabolism
Module
xgl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120804910 (gldc)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120804910 (gldc)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
120804910 (gldc)
00670 One carbon pool by folate
120804910 (gldc)
Enzymes [BR:
xgl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
120804910 (gldc)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
120804910
NCBI-ProteinID:
XP_040010570
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Position
LG19:7108098..7129384
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AA seq
1040 aa
AA seq
DB search
MQTCAKSWGIFLAKSVNPSAPCRHLSDKSRVVWKLQCRIRNSGTSRTTAARALRTSAAVP
SRQIERILPRHDDFAERHIGPGEREKREMLDAVGLESIDQLIENTVPASIRMQWSMKMDD
PVCENEILESLQKIASKNKVWRSYIGMGYYNCSVPPPIQRNLLENAGWVTQYTPYQPEVS
QGRLESLLNYQTMICDITGMPVANASLLDEGTAAAEAMQLCHRQNKRRTFYIDSRCHPQT
IAVVQTRANYIGVKTVLKLHHEMDFSGKDVSGVLFQYPDTDGRVEDFTALVDRAHKGGAL
ACCATDLLALCVLRPPGEFGVDIALGSSQRFGVPLCYGGPHAAFFAVKDNLVRMMPGRMV
GVTRDAAGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMYALYHGPQGLKHIAE
RTHNAALILAEGLKRAGHRLHSEMFFDTLKINCSVAAKDILERAVQRQINLRVYTDGVLG
VSLDETVTERDLDDLLWVFGCESSAELIAEKMGERVKGIMGSPFKRTSKYLIHQVFNSYH
SETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSSELMPITWREFANIHPFVPLDQAE
GYQKLFRQLEKDLCEVTGYDKISFQPNRCARQKFHRYPDMLIGSSLRAKRDKTPPQIKDW
LTQVCLIPKSAHGTNPASAQMAGMKVQVVEVDKDGNIDLAHLKALVDKHKASLAAMMITY
PSTFGVFEEHIRDVCDLIHENGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIP
HGGGGPGMGPIGVKAHLAPFLPSHPVVAMQSVNTSSSLGTISAAPWGSSAILPISWAYIK
MMGSKGLLHATEVAILNANYMAKRLEGPYKILYRGRKGFVAHEFILDVRPFKKTANIEAV
DVAKRLQDYGFHAPTMSWPVAGTLMIEPTESEDKAEMDRFCDALLGIRQEIADIEEGRMD
SRINPLKMAPHSLACISSSNWDRPYSREFAAFPLPFIRPETKFWPSISRIDDIYGDQHLV
CTCPPMEVYESPYEEKRASS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcagacctgcgccaagtcctgggggatcttcttggccaagtcggtgaatcccagcgca
ccgtgcaggcatctgagtgacaagagccgcgtggtttggaaacttcagtgcaggatccga
aacagcggcacgtcccgcaccacagcagcccgggctctgaggacgtctgcggccgtcccc
tccagacagatagagagaatattacccagacacgatgactttgcagagaggcacatcggt
ccaggtgagagggagaagagagaaatgctggatgctgtgggactcgagtcaatcgaccag
ttgatcgaaaacacagttccagcctccatccgtatgcagtggagtatgaaaatggatgat
ccagtctgtgagaatgagattctggagtccttacagaagattgcatcaaagaacaaggta
tggcggtcctacatcggcatgggctactacaactgctcggtaccgccgcctatccagcgc
aatctcctggagaatgcgggctgggtgactcagtacacgccttaccagcctgaggtttct
cagggtcgcctggagtcactcctcaactatcagaccatgatctgcgacatcacaggcatg
cctgtggccaacgcctccctgctcgacgagggaacggccgctgccgaggccatgcagctc
tgccacagacagaacaaacggaggactttctacattgactcacgttgccatcctcagacc
attgctgtggtgcagaccagagccaactacataggggttaaaacagtgctgaagctgcat
catgagatggactttagcgggaaggatgtgagcggtgtgctcttccagtatccagacact
gatggtagggtggaagacttcaccgcccttgtggaccgtgcacacaaaggaggggccctg
gcttgctgtgccacagatctgctggctctctgcgtgctgcgtcctcctggggagtttggc
gttgatatcgcactgggcagttcccagaggttcggggtccctctctgctacggcggtcca
cacgctgccttctttgctgttaaagacaacttggtccggatgatgcctggcagaatggtt
ggcgtcaccagggatgcagctggtaaggaagtgtatcggctcgctttgcagaccagagag
caacacatccgcagagacaaagcaaccagcaacatctgcactgcacaggctctgctggcc
aacatggctgctatgtatgcattgtatcatggtcctcagggactcaaacacattgctgag
aggacacacaatgctgctctgatcctagctgaaggtctgaagagagcaggacaccggctg
cacagcgagatgttcttcgacactttaaagatcaactgtagcgtggcagccaaagacatc
ttggagagagctgtgcagaggcagataaacctgcgagtctacactgatggagtgctgggt
gtttctctggatgagacggtgactgaaagggacttggatgacttgctctgggtctttggc
tgtgaatcatcagctgagctgattgctgagaagatgggtgagcgggtgaaagggatcatg
ggaagtcctttcaagaggacgagcaagtacctcatacaccaggtctttaacagttatcac
tctgagaccaacattgtgcgatacatgaagcgcttggagaacaaggacatctccttggtg
cacagcatgataccactgggctcctgcaccatgaagctaaatagttcttcagaactcatg
cccatcacctggagagagtttgccaacatccaccccttcgtgcctctggatcaggctgag
ggctaccagaaactttttagacagctggagaaggacctttgtgaggtgacgggctatgac
aagatctccttccagccaaacaggtgtgctcgtcagaaattccaccggtatcctgacatg
ctgattggtagtagtttgagggcaaagcgagataagacacctcctcagattaaagactgg
ctgactcaagtctgtctgatccccaagtcagcccatggcaccaacccagcgagtgctcag
atggctggcatgaaggttcaggtggtggaggtggacaaggacggcaacattgacctggcg
cacctcaaggccctggtggataaacacaaggcgagcctggcggccatgatgatcacctac
ccctccacctttggtgtgtttgaggagcatatcagggacgtctgtgatcttattcatgag
aacggaggccaggtgtacttggatggtgccaacatgaacgcccaggtgggcttgtgtcgt
cctggagactacggctccgacgtgtctcacctgaacctgcacaaaaccttctgcattcct
catggcggaggaggacccggcatggggccaattggagtgaaggcccacctcgccccgttc
ctgccgagccacccggtggtcgccatgcagtccgtcaacaccagcagctcactgggcacc
atcagcgccgccccctggggctccagcgccatcctgccaatctcctgggcttacattaag
atgatgggatccaagggactgcttcatgctacagaggtggccatcctcaacgccaactac
atggccaagaggctggagggtccctataaaatcctctacagaggcaggaaaggttttgta
gcccacgagttcattctggatgtgaggccattcaagaagacggctaatattgaggccgtc
gatgtggccaagaggctgcaggattatggtttccatgcgcctaccatgtcatggccggtg
gccggtacactcatgatcgagcccacggagtcggaggacaaggctgagatggatcggttc
tgcgacgccctgcttggtatccgacaggagatcgcagacatcgaggagggaaggatggac
tcccgcatcaacccgctcaagatggcccctcactctctagcctgcatctcatcctccaac
tgggacagaccttactccagggagttcgctgctttccccttgcccttcataaggcctgag
accaaattctggccgagcatctccaggattgacgacatctatggcgaccagcacctcgtg
tgcacctgcccacccatggaggtctacgagtctccatacgaggagaagagggcctcatca
tag
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