Entry |
|
Symbol |
tmc1
|
Name |
(RefSeq) transmembrane channel-like protein 1
|
KO |
K21988 | transmembrane channel-like protein |
|
Organism |
xgl Xiphias gladius (swordfish)
|
Brite |
KEGG Orthology (KO) [BR:xgl00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:xgl02000]
120804965 (tmc1)
03037 Cilium and associated proteins [BR:xgl03037]
120804965 (tmc1)
Transporters [BR:xgl02000]
Other transporters
Pores ion channels [TC:1]
120804965 (tmc1)
Cilium and associated proteins [BR:xgl03037]
Other cilia and associated proteins
Stereociliary proteins
120804965 (tmc1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG19:20738202..20748473
|
AA seq |
976 aa
MPRDSLITSENDIYIGLESAGDEDEVSTFQEEHKRERHRRKRRDADRKNKKKGNRRRKRA
CKEAGEGEEELQARLEKRERGRRKRVKNDQEAKGRERDEEEHTIIKSGKTMKTGKNLKND
KTKKKEKEDIEGEAEERNAKGKNNHRPAKKEEKEEDGGKHKVKEKAQEVKKKKHKKVVET
SSAQEASEEENEENEEEDYEEKEVRPECLSPEELEKLKEAVDERKKLIQSLRGKPWPMKK
KLVTLRESQEFVEKYEGALGKGKGRKLYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIK
EIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSIPRKTVPRAEEA
SAMDFAVLWDCGGYAQYSVLFYGFYNNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRT
MARNANESGVGDDNSFNFSWKMFTSWDFLIGNPETADNKFASITTSFKEAILEEQESRKD
DNIHLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSL
LGMFCPMLFDVISSLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEKIV
KFNITTWESSLYNGTVSENSTAPPIPIQPADVPRGPCWETMVGQEFVRLIISDTMTTYIT
LLIGDFLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLP
ALNVLRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTI
PPSFDCGPFSGKKRMFDVIQETLESDFPAWFSKVFSYASNPGLVLPFILLMVLAIYYLQS
TSKSYKEANVELKKKLQTQNEENKKKNKRAALKAQMDLDEARKETSQAAEQQNNNVSLQD
QENGEENYGNNQRLYLSRTGRNPRPPAGDHEWQPPATRTPIPRTYHPGNHGVPGYLPGFS
RQSEPRMYRVPSLQRH |
NT seq |
2931 nt +upstreamnt +downstreamnt
atgcctcgagacagtctgatcacctctgagaatgacatttacattgggctggagtctgca
ggtgacgaggatgaggtttccacttttcaagaggaacataagagggaaagacacagaaga
aaaagaagggatgctgatagaaagaataagaagaagggaaataggaggaggaaacgagca
tgtaaagaagcaggagaaggggaagaggaattgcaggccaggcttgagaaaagagaaaga
ggcaggagaaagagagttaaaaatgatcaagaagcaaaaggaagagagcgagacgaggag
gagcacaccataataaaaagtggtaagacaatgaaaacagggaagaatttaaaaaatgat
aaaaccaaaaaaaaagagaaagaggacatagagggagaagctgaagaaagaaatgccaag
ggaaaaaataatcatagacctgccaaaaaagaagagaaagaggaagatggaggtaaacat
aaggtaaaagagaaagcacaggaagtgaagaagaaaaagcacaaaaaagtagttgaaaca
agttcagcgcaggaggcaagtgaggaagaaaatgaagagaatgaagaagaggattatgag
gagaaggaggtgaggccagagtgtctgtcaccggaggagctggagaagctgaaggaggca
gtggatgagaggaagaaactgatccaaagtctgaggggaaaaccctggccaatgaaaaag
aaacttgtcactttacgggagtcccaggagtttgtggagaaatatgagggagctttgggg
aaagggaaaggcaggaagctctatgcctacaaggtcatgatgaccaagaaatggatgaag
ttccaacgggactttgaaaatttcaaaactgcctgcattccatgggagatgaaaataaag
gagattgaaagtcattttggctcctcagttgcctcttactttatcttcctgaggtggatg
tatggcatcaacatgatcttgtttggtctgacctttggcctggttatggtgccagaggca
ttaatggggagaccctatggcagcattccaagaaagactgtccccagggctgaggaggcc
agtgccatggactttgctgtcttatgggactgtgggggttacgctcagtattcagtcctc
ttctacggtttctacaacaaccagcgtgctattggctggctcaagttccgtatgcctctg
tcgtacttcctggttggtgtgggaacagtggcctatagctatatggtggtcataagaacg
atggcccgtaatgcgaatgagtcaggggttggagatgataacagctttaatttcagctgg
aagatgttcaccagttgggacttcttgataggaaaccctgaaactgcagacaataagttt
gcctccatcaccaccagtttcaaggaagcaatcttagaggagcaagagagccgaaaagat
gacaacatccatctgactcgctttctgagggtgctggccaacttcttggtcttgtgctgc
ttagcaggaagtggatacctcatctactttgtagtgcgtcgctctcagaagtttgctcta
gatggactggagaatcacacctggtgggaaaggaatgaggtgaacatggtcatgtcatta
ctgggcatgttctgccccatgctgtttgacgtcatcagctccctggagaactaccaccct
cgtgtcgccctgcagtggcagctgggtcgcatctttgccctcttcttgggaaacctctac
accttcatcattgcactcatggatgagatcaacctcaaaagggaagaggaaaagatcgta
aagtttaatataaccacgtgggaatccagtctttacaacggcacggtatcagaaaacagc
accgctccacccatccctatccaacccgctgatgtgcccagagggccctgctgggagact
atggtggggcaggagtttgtccggctgatcatatctgataccatgacaacctacatcacg
ctgctgattggtgatttcctgagagctgtgcttgttcgttttctcaactactgctggtgt
tgggacctggaggctggattcccttcctactctgagtttgatgtcagtgggaatgtcctg
ggcctgatcttcaatcaaggaatgatatggatgggggctttctatgccccctgcctacct
gccctgaatgtcctccgcctccatgtgtccatgtacctgcagtgctgggctgtgatgtgc
tgtaatgtgccacaggaaagagtcttcaaggcctctggctccaacaacttttacatggcc
atgttgctggtcatcctcttcctgtccactctgcctgccatctacaccatcgtcaccatt
cctccttcttttgattgtggacccttcagtgggaaaaaacgaatgtttgatgtgatccaa
gagacgctggagtccgacttccctgcctggttcagtaaagtgttcagctatgcctctaac
cctggactagtgctacccttcatattgcttatggtactagccatctattacttgcaatcc
acatccaaaagctacaaagaagctaatgtggaactgaagaaaaaactacaaacgcaaaat
gaggaaaacaagaagaagaacaaacgagcagcgctgaaggcacaaatggatctggacgag
gccagaaaagaaacatcacaggctgcagagcaacaaaacaacaacgtttcactacaagac
caagagaatggggaagaaaactatggcaataatcagaggctgtatcttagtaggactgga
cgcaaccctcgtcctcctgctggagaccatgaatggcaacctccagccaccagaacccct
atccccaggacctatcaccccggcaaccacggggttcctgggtaccttcctggtttctct
cggcaaagtgaacccaggatgtacagggtgccgagcctgcagagacactaa |