Xiphias gladius (swordfish): 120804975
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Entry
120804975 CDS
T07311
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b
KO
K14411
RNA-binding protein Musashi
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120804975 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120804975 (msi1b)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120804975 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120804975
NCBI-ProteinID:
XP_040010667
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Position
LG19:complement(22905918..22927110)
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AA seq
387 aa
AA seq
DB search
METEGSQSSLSAADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQTRHELDSKTVSSLSAQPRGPWQGPLWLAVGCVRGVWWGPW
QPQRACVWRGEGSVISHRGWMLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMF
DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRV
MPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYTYQFPEFHLERTPLLTSPHPPEL
TAIPLTAYGPMAAAAAAAAVVRGSTPSRSAGFLGTSSPGPMADLYGTASQESAVSSYLSA
ASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagagcagcctgtccgcagcggactctccacacgacccctgc
aaaatgttcataggtggacttagctggcaaacaacacaagagggtctgaaggagtacttc
tgcaagtacggcgaggtgaaggagtgtatggtgatgcgagatccggttactaagcgctcg
agagggttcggattcgtcacctttgttgatcaggccggcgtggataaagttttggcccaa
accaggcacgagttggactccaaaacagtgagttctctctccgcgcagcctcgtgggccg
tggcagggccccttgtggctggcagttgggtgtgtccgtggtgtttggtgggggccgtgg
cagcctcagagagcgtgtgtttggcgtggagagggctcagtgatcagccacaggggttgg
atgctggtgactcgaaccaagaagatctttgtgggaggcctgtcagtgaacacaactatc
gaggacgtcaagcagtactttgaccagtttgggaaggttgacgatgccatgctcatgttt
gacaagaccaccaacagacatagagggtttggctttgtgacgtttgagaatgaggatgtg
gtggagaaagtctgcgagatccacttccacgagatcaacaacaaaatggtggagtgtaag
aaagctcagcccaaggaggtgatgtcccccacgggctcagccagggggcgctctcgggtg
atgccctatgggatggacgccttcatgctaggcattggcatgcttggttatccaggcttc
cagacagccacctacaccagccggagctacgctggcatcactcccggatacacctaccag
ttccctgagttccacttagagaggactccccttctgacttcaccccacccccctgagctc
acagccattcctcttacagcgtacggaccaatggcagcagcagcagcagcagcagcagta
gtcagaggctctaccccgtctcgctcagctggatttttaggcacgagcagcccggggccg
atggcagacctgtatggaacggccagccaggagtcggctgtcagcagttacctcagcgct
gcgagccccgccccaagcactggattcagccatagtttggggggccctttgatcgccacg
gccttcactaacggatatcactga
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