Xiphias gladius (swordfish): 120804989
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Entry
120804989 CDS
T07311
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120804989
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120804989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
120804989
NCBI-ProteinID:
XP_040010709
LinkDB
All DBs
Position
LG19:6795037..6819330
Genome browser
AA seq
1531 aa
AA seq
DB search
MNLPCPKKLHKTRVVMSENDSCLPPQSFSSIRYKAVDYVFETATSLKVMMNLLALPTPYL
TGTSDLYPHSGKLPEVTYRTPWIRGKVISTCKLFVSGSVLDDLGGKKQPVKSPERFNLTL
SEVKGDEEEIPSSNPDSLKDLDQDEYDCSLKESQINDPCQESFFKWTTDQMRPGNENKDL
LLPEELMVVDYLPQFKRHLPTLKAKLSRLRTLPVADPLQSSTGDTISEDTIFRHCASYEK
APDVYTSDTQTCTNIHEEFLKESLMKDESLLLPVVVDSFILTTENCTTFSSIRSHVNVVP
ELLDEQLPILDVLRQDVSASVDISQYDLPEEPSEECKMNGGLIDSDFTGCMVLPTEMELD
LTLTPTPKTTHTHLFLSTSELEREELSPLRRRSLLSARVLEEMEMALWKAEKHPAFVVGF
LLAEPQRYEPAVNFQPLSEALKVIKSEKQSLISAGGELESQMSMGAPKVCLCSNHEFTES
LKSEISPTTVEKLEDFKKLSPEPVPFTVRSTLKNPTNQTPLPHLKKPETAAFHAEAATDV
PLLQKEILSDMSQNTFLMHTVNTNNKGVKPTSLIFSKPATAANTKNETSDERFSEVAATS
SACKSDTSTGGDNCNNKLTVSSGLNIRDNRRGLPVTRHPPEKDLDPLSTFMILRSQQTAP
DTAAPQSSASAPAPKVNRETPRCELQPPAEQIQRSDRRPRYMSDAVTGNATREQEASGQS
EGQLISHPVSQLNPLERQDSRVIQVRATDSQLRAYCELLALAQPLLNSARQLGLNFPVRG
DFSCLAPDQTHFFLKQQEKALCRMHAQSTELVRDQELLFNQAALIHVLVTFKELLLKCDL
CTALEYLAKAAEACAEQSLEQLVKRLQIILFLSHKNQESDLKLQELQQLLAAWLLSRKGQ
NNTEKILVITSVDSDDSRSVIINSLSQVAGAAVTAVCPEENKSKLNGARVVSSVCDSVCV
VVYEQHIGPDFPWNSFCLVVEYDHPGQSPWSTVCRERSVSHLAYITSISDTEKEKVSWCL
EDKVPYVLLVTEGLLNCPLLLQTLESGFNITVLERSHCPSLKMLGGTRHYAVITVDESTA
IVIQEQDELCQEGAGEGLVMRLTALSLQYSCCWLILHCPDIQGGGFSSEAYANLVLVYSS
LVLFGMKSKDLDVKVLIVSEILEIAKWISQICFHSLMSSDRDPHIYLNRDWLTVTPSQEE
KSLLQFPCFNPLVSQLMLRRAPSFQWLLGASLSQLKALLPEVPHEVLKLFCDTTSLYTLN
TDPNQPESRTVVAETKQQTPPHPQPPTNPQPEPFWSHHNTDFLFGAEGAEGSFCEQDPDS
TVQDGYTDFRLDLSCSFASPDVYPQRSWTSGDPFREEEVKFSGWRSRAGAVGRVVRRVNN
EWTLRPPPNLSGYTNDLYTTDDSPLTVDPPFRYSPVQQQLPDVNSQRFTYSTVCTDLQHM
NGHHIPCGLSPPTGVTLWGRGQRSNDCLSDSGGMTTVSPKYGSKCWIGRERKRSGAAAGL
VGTVLTPLKMGRLSYERVPGRSDGQTRLRIF
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcccctgtccaaaaaaactacataaaactcgtgtcgttatgtctgaaaacgac
agctgtttacctcctcaaagtttctcttctatcagatataaagctgtcgactatgtgttt
gagacagccaccagtttgaaagtcatgatgaacttgctggcactgccgacgccttacttg
actggcaccagtgacctgtaccctcacagtggcaagctgcccgaagtcacctacaggaca
ccgtggatcagaggaaaggtgatctccacctgcaaactctttgtcagtggttctgtgctt
gacgacctgggagggaaaaaacaacccgttaagtcaccagaaagatttaatctaactctg
agtgaggtgaaaggggatgaggaggagatacccagctctaatcctgactcgctgaaggat
ctagaccaggatgagtatgactgcagtttaaaagagtcgcagatcaatgatccatgtcag
gaatcgtttttcaagtggacaactgaccagatgagacctggaaatgagaacaaggatctc
ctcctgccagaagagctcatggttgtcgattacctgccacaatttaagagacatttaccc
acgttgaaagccaaactgtccaggctgaggacgcttcctgtggctgaccctctgcagagc
tcaacaggagacaccatctctgaggacaccatattcaggcactgtgcgtcttatgaaaaa
gctcctgatgtgtataccagtgacacccagacgtgcacaaacatacatgaggagtttctt
aaagagtcactcatgaaggacgagtctctgctgttacctgttgtagtggacagttttata
ctcaccacagaaaactgcaccaccttttcaagcattcgcagtcatgtgaatgttgttcct
gagctactggacgagcagcttccaatcctggatgtacttcgtcaagatgtatcagcatca
gtggacatttcccagtatgatttaccagaggagcccagcgaagaatgcaagatgaatgga
ggcctcatagactcagatttcacaggatgtatggtgcttccaactgaaatggagctggac
ttgactctgaccccaactccaaagaccactcacacccatctttttctgtccacctctgaa
cttgagagggaagagttgtcgccgctccgcagacgatctctgttgtcagcgagagtccta
gaagagatggagatggcgctttggaaagcagagaagcatccggccttcgtggtgggcttt
ctgttggcagagcctcaaaggtatgaaccagctgtcaacttccagcctctgtctgaagcc
ctgaaagtcattaaatcagagaaacaaagccttatcagtgctggcggtgaactggagtca
cagatgagtatgggggccccaaaggtgtgtttgtgcagcaaccatgagttcacagagagc
ctgaagtctgagatttcccccaccacggtggaaaagttggaggactttaaaaaactgtca
cctgaacctgtgccattcacagtcagatccaccctgaagaatcccacaaaccaaactcca
ttacctcacctgaagaaacctgaaactgctgcttttcatgctgaagctgctacagatgtc
ccccttctccaaaaagaaatcctctctgacatgtctcagaacaccttcctgatgcacact
gtcaacacaaacaataagggagtaaaacctacaagcttgatattttcaaaacctgccacg
gccgccaacaccaaaaatgaaacctccgacgagaggttctcagaagtcgcagccacgtct
tctgcctgtaagagtgacaccagtacaggtggagacaactgtaacaacaagctgactgtg
tcctccggactgaatatccgagacaatcgcagaggtctgccggttaccagacatccacca
gagaaggacctcgaccctctgtccaccttcatgatactaagatcccagcagacggctcca
gacactgcagcgcctcagagctcagccagcgctccagcaccaaaggtgaaccgggaaaca
ccacggtgtgagctgcaaccccctgcggagcagatacagagatcagacaggaggccaaga
tatatgagtgatgctgtgacaggaaatgctaccagagagcaggaagcatctggtcagtca
gaaggtcaactcatcagtcatcctgtcagtcagttgaaccctctggagagacaggacagc
agagtaatacaggtccgagctacagacagccagctgcgtgcctactgtgagctgctggcc
ctcgctcagcctcttttgaactctgccagacagctggggctcaacttcccagtgcgggga
gacttcagctgcctggcccccgatcaaacacacttcttcctcaaacagcaggagaaggca
ctctgcaggatgcatgcacagagcacagagctggtcagagatcaggaactgcttttcaac
caggcggctctgattcatgtgctggtgacattcaaggagctgctgctgaagtgcgacctc
tgtactgcattggagtacctggctaaggcagctgaggcgtgtgcggagcagagtctggag
cagctggtgaagaggctgcagatcatcctcttcctcagtcacaagaaccaggagtctgac
ctcaaactgcaggagctgcagcagctgctggctgcgtggctgctgagcaggaaaggacag
aacaacacggaaaaaattcttgtcattacatcagttgactctgacgacagcagatctgta
atcatcaacagcttgagccaagtggccggtgcagctgtaactgcagtttgtcctgaggag
aacaagagcaaacttaacggtgccagggtggtcagcagtgtgtgtgacagtgtgtgcgtg
gtggtgtatgagcagcatataggccccgacttcccctggaacagtttctgtctggtggtg
gagtacgaccatccaggccagtctccgtggtccacagtctgcagagagaggagcgtcagt
cacctcgcctacatcaccagcatctctgacactgagaaggagaaagtgtcttggtgcctg
gaagataaggtgccttatgtgttgcttgtgacagaggggcttcttaactgtccactgctg
ctacagacacttgagtcagggtttaatataactgtgctggagaggagccactgtccgtcc
ttgaagatgctcggagggacccgtcactacgctgtgatcacagtggatgaaagcacagct
atcgtcattcaggagcaggatgaactttgtcaggaaggagccggtgagggactggtgatg
aggctgaccgcgctctctcttcagtacagctgctgttggctcatcctgcactgcccggac
atccagggaggaggattttccagcgaggcctacgctaacttggtgttggtttattcatcc
ctggtgctgttcgggatgaagtccaaggatctagatgtcaaggtactgatagtgtcagaa
atcttggaaattgccaagtggatcagtcagatctgcttccacagcctgatgtccagtgac
agggatcctcacatctacctgaacagagactggctgaccgtgacgccttcacaggaggaa
aagagtctgttgcagttcccatgttttaaccctctggttagtcagctaatgctgaggcga
gcgccgtccttccagtggctcctgggggcctctctgtctcagctgaaggcgctcctccct
gaggtgccacatgaagtcctcaagctgttctgcgacaccacctccctctatacactgaac
acagaccccaaccagccagagtctcggacggtcgtcgctgagacaaagcaacaaaccccc
ccccatccacagccccccaccaacccacagccagagccgttctggagccaccacaacacc
gacttcctgtttggagctgagggtgcagagggcagcttctgcgaacaagacccagactca
acggtgcaggacggatacacagatttcagacttgacctgagttgctcctttgccagccca
gatgtttacccgcagaggagctggaccagtggggatccgttcagagaggaggaggtgaag
ttttctgggtggagaagcagagctggagcagtagggagagttgttaggagagtaaacaac
gagtggacacttaggcctccaccaaacctcagtggctacaccaacgacctatacaccact
gatgacagtcctctcacagtggaccccccattcaggtacagccccgtccagcagcagcta
cctgacgtcaacagtcaaaggttcacatactctacagtctgcactgacctccagcatatg
aacggccatcacatcccctgcggtctgagccctccgacgggggtcacgctgtggggtcga
ggtcaacgcagcaacgactgcctctccgacagtggagggatgaccacagtttcacctaag
tatggctccaaatgctggataggacgagagaggaagaggagtggagcggctgcaggcttg
gttggaacagtgttgacgccactgaagatggggaggctgagctacgagagggttcccgga
agaagcgatgggcagacgaggcttagaatattttag
DBGET
integrated database retrieval system
