Xiphias gladius (swordfish): 120805070
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Entry
120805070 CDS
T07311
Symbol
abcb9
Name
(RefSeq) ATP-binding cassette sub-family B member 9 isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl02010
ABC transporters
xgl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120805070 (abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120805070 (abcb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120805070 (abcb9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xgl02000
]
120805070 (abcb9)
Membrane trafficking [BR:
xgl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120805070 (abcb9)
Transporters [BR:
xgl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120805070 (abcb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA_29
AAA_30
AAA_25
SbcC_Walker_B
nSTAND1
DUF4191
DUF948
Motif
Other DBs
NCBI-GeneID:
120805070
NCBI-ProteinID:
XP_040010855
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All DBs
Position
LG19:25834061..25843074
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AA seq
812 aa
AA seq
DB search
MGIKACVSCTVLFILLDVAITTLLYTHGLHLIIFRKDALYFNILQSALDLWGTVLLRASL
LLGASIGVSWNKEDGPTRVATLTTLILLICLIVITYALAKLLMLTELEPLTQQPWLLSLI
CWTCASSLGVMLLWRLLGKEPGSLSSHNSRSSSGRAVGGSEDTEKLVGTASEEEREVGCE
RKKHKEEGSQEKEKTSSGATLGRLITFCRKDGGLLSVAVLFLLISAVCEAFIPYYYGRAI
DSIVVHQSMEYFAKPVITLGVLALASSVAMGVRGGVFTLTFARLNLRLRNHLFRTLMRQE
IAFFDENHTGDIISRLSADTTQVSDLISQNVNVFLRSTIKGAGFFIFMFGMSWKLTLVTI
MGFPYIALVSKLYGEYYKKLTKEVQTTLAEANKVAEETISAMRTVRSFANECGEADSYYA
KLLVMFQLNKKQAVAYACYMWSSCISELALEVAILYYGGHLVVTGQMSSGALISFFIYML
ELGECLESIASVYTGLMQGVGAAEKVFEYLDRNPKHSADGTEAPDTCTGLVEFKDITFAY
PARPEIDILKGVSFTLRPGEVTALVGPSGSGKSSCVSLVENFYLPQQGQVLLDGKPVHTF
QHNYLHSKVALVGQEPVLFARTVEENITYGLSDVPREDVVQAATKANAHDFITTLPKGYE
TNVGEKGTQLSGGQKQRVAIARALIRNPRVLILDEATSALDAESEHIVQQALNNIMQERT
VLVIAHRLSTVEKADNIIVIDRGCVAEQGPHSQLMASGGLYCKLVQRQVLGIETGAEVLN
PSENLSWKSDGGRQRRRRSSSSASESECNVRY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcaaagcatgtgtgagctgcactgttttattcatcctgctggatgttgccatc
accactctcctatacacacatggattacacttaatcatattcagaaaggatgccttgtac
tttaacatcctccagtcagcattggatctctgggggaccgtgctgctccgagcctcactt
cttctgggagcctccataggtgtgtcatggaacaaggaggacggcccaacgagggtcgct
acactcaccaccctcattcttctcatctgcctgattgtcatcacctacgcccttgccaag
ctgctgatgctgactgagctggagcctctgacacagcagccctggcttttgagcctgata
tgctggacttgtgcctcctccctgggtgtcatgcttctctggaggctgctggggaaggag
cctggctcactgagcagtcacaatagccgcagcagcagcggcagagcagttggaggctcc
gaggacactgagaagctggtggggacagctagtgaggaggagcgggaggtggggtgtgag
aggaagaagcataaggaggagggaagccaggagaaggagaagaccagctctggggctaca
ttgggacgtttgataaccttctgcaggaaggatggtgggctgctgtctgtagctgtcctc
ttcctcctcatctctgctgtgtgtgaagccttcataccatactactatgggagggccata
gacagcattgtggttcaccagagcatggagtactttgctaagccggtcataacactggga
gtactggctttagctagttcagttgcaatgggagtgcgtggaggcgtcttcacgctgacc
tttgctcgattaaaccttcggctcaggaaccatctcttcagaactctgatgaggcaggaa
attgccttttttgacgaaaatcacacaggtgacatcatttcacgtctgtcagctgacacc
acccaagtgagtgatctcatctcccagaatgtcaacgtcttcctgaggagcaccatcaag
ggtgctggcttcttcatcttcatgtttgggatgtcctggaagctcacactggtgaccatc
atgggatttccttacattgccctcgtctctaaactttatggagaatactacaagaaactg
accaaagaagtgcaaacaactcttgcagaggccaataaagttgcagaagaaaccatttca
gccatgagaacagtgcggagctttgctaacgaatgtggtgaggctgactcctactacgcc
aagctcttggtcatgttccagctcaacaaaaagcaagcagtggcctatgcttgctacatg
tggtccagttgtatttcagaacttgccttagaggttgcaatcctctactatggtggtcac
cttgtggttactggtcagatgagtagtggtgccttgatatctttttttatatacatgctt
gagctgggagaatgcctagagagcattgcatctgtgtacacgggccttatgcagggagtg
ggagctgctgagaaggtttttgagtaccttgacaggaatcccaaacactcagctgatggc
acagaggctccagacacatgtactggtttggttgaatttaaagacatcacatttgcctac
ccagcacgccctgagattgatattctcaagggagtgtcattcaccttgcggcctggagag
gtcacagccctcgtgggaccctcaggcagtggaaagagctcctgtgtgagtctggtggaa
aacttctacctgcctcaacaaggccaagtgctgctggatggaaaacctgttcacaccttt
cagcacaactatctccactccaaggtagctcttgttggtcaagagcctgtgctgtttgcc
cggacggttgaggaaaacatcacctacggcctgagtgacgtccccagagaggatgtggtg
caggctgccaccaaggctaatgctcatgactttatcaccaccctccccaaaggctatgag
acaaatgttggagagaagggcacccagttgtcaggggggcagaaacaaagggtggccatt
gcaagagctctcatccgcaacccacgtgttcttatcttggatgaggcgaccagtgctctg
gatgcagagagtgagcacatcgttcagcaggctctgaacaacatcatgcaggagcgcaca
gtgctggtgatcgcccatcggctcagcacagtggagaaagcagacaacatcatagtgatc
gacaggggctgtgtggctgaacagggccctcacagtcagttgatggccagcggggggctc
tactgcaagctggtgcagaggcaggtcctgggcatagagacaggggcggaggtcctaaac
ccatccgaaaacctcagctggaagtccgatggagggcgtcagcggagaagacgaagcagc
agcagcgccagcgagtctgagtgcaatgttcgctactga
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