Xiphias gladius (swordfish): 120805076
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Entry
120805076 CDS
T07311
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120805076
03041 Spliceosome [BR:
xgl03041
]
120805076
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120805076
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120805076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
120805076
NCBI-ProteinID:
XP_040010864
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Position
LG19:complement(25113924..25124227)
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AA seq
387 aa
AA seq
DB search
MMEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHA
AASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
TTYENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSIEGHIVKCYWGKETPDMMNPMQQMPMPQQNKMGFAAA
QPYGQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSAISNGG
VMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgatcaacccagaaccttgtatgtggggaatctgtccagagatgtcacc
gagccccttatcctgcaggtcttcacacagataggaccctgcaagagctgtaaaatgata
gttgatacagctggaaatgatccgtactgctttgtggagttctatgaccacaggcatgct
gctgcctcattggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagtgaac
tgggccacaacaccaaccagccagaaaaaagacacaagtaatcactttcatgtctttgtt
ggagacctcagcccagaaataactacagaagacgtcaaagctgcctttggtccatttggc
aggatatcagatgctcgtgttgtgaaagatatggctacagggaaatctaaaggctatggc
tttgtgtctttcttcaacaaatgggatgcagaaaacgccattcagcagatggggggccag
tggttaggaggcagacagattcgaactaactgggccacaagaaagccccccgccccaaag
accacctatgaaaataactccaagcacctatcctttgatgaagtagtgaatcagtccagc
cccagtaactgcactgtgtattgtggtggagtcagcacagggctgacagaacaactgatg
agacagaccttctctccctttggacaaatcatggaaatcagagttttcccagacaaaggc
tattcatttgtgaggtttaactcccatgagtcagcagcccatgccattgtgtcagtgaat
ggcacttcaatagagggccacatagtcaaatgctactggggtaaagagaccccagacatg
atgaacccaatgcagcagatgcctatgcctcagcagaacaagatgggcttcgctgcagct
cagccctacggccagtggggccagtggtacggcaacgggccccagattagccagtacgtc
ccaaatgggtggcaggtccccacctacggcgtctacggccaggcttggaaccagcagggc
ttcaatcacttaccagccagtgctgggtggactggcatgagcgccatcagtaacggtggg
gttatggagcctacacagggattgaatgggagtatgctagccaaccagcctggtatggga
gccgcaggataccccacacactga
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